RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 SLC50A1Q9BRV3 221 aa7□□□□□ -1.29
GABRA1-202ENST00000393943 SPRR3Q9UBC9 169 aa7□□□□□ -1.29
GABRA1-202ENST00000393943 CPAMD8Q8IZJ3 1885 aa7□□□□□ -1.29
GABRA1-202ENST00000393943 C10orf142B7Z368 130 aa7□□□□□ -1.29
GABRA1-202ENST00000393943 NDUFS8O00217 210 aa7□□□□□ -1.29
GABRA1-202ENST00000393943 COX6CP09669 75 aa7□□□□□ -1.29
GABRA1-202ENST00000393943 LINC01545Q5VT33 79 aa7□□□□□ -1.29
GABRA1-202ENST00000393943 PPP1R27Q86WC6 154 aa7□□□□□ -1.29
GABRA1-202ENST00000393943 TMEM160Q9NX00 188 aa7□□□□□ -1.29
GABRA1-202ENST00000393943 MRPL16Q9NX20 251 aaKnown RBP7□□□□□ -1.29
GABRA1-202ENST00000393943 KIAA2026Q5HYC2 2103 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 KNTC1P50748 2209 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 C22orf46C9J442 243 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 LTAP01374 205 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 IGHG3P01860 377 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 PEAR1Q5VY43 1037 aaPredicted RBP6.99□□□□□ -1.29
GABRA1-202ENST00000393943 ZNF833PQ6ZTB9 187 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 D6R8Y8 96 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 SRSF1Q07955 248 aaKnown RBP eCLIP6.99□□□□□ -1.29
GABRA1-202ENST00000393943 SCRT2Q9NQ03 307 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 H3BTX0 84 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 ZNF788Q6ZQV5 615 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 DTX1Q86Y01 620 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 FXYD5Q96DB9 178 aa6.99□□□□□ -1.29
GABRA1-202ENST00000393943 TRAV8-6A0A0B4J262 113 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 A0A1W2PPM0 123 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 PRSS46E5RG02 174 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 M0QZ24 198 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 CEACAM8P31997 349 aaPredicted RBP6.98□□□□□ -1.29
GABRA1-202ENST00000393943 LINC00311Q8N616 119 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 TMEM133Q9H2Q1 129 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 C17orf100A8MU93 164 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 CD40P25942 277 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 LOXL3P58215 753 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 RNFT1Q5M7Z0 435 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 C8orf31Q8N9H6 132 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 C9orf106Q8NAJ2 232 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 Q8TCH9 128 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 METTL26Q96S19 204 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 EML5Q05BV3 1969 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 LY6G6EA0A0G2JKS1 128 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 ZNF503-AS2A6NEH8 195 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 IGHV3-48P01763 117 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 SPATA12Q7Z6I5 190 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 C18orf15Q96N68 181 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 GAFA1Q96PS6 74 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 KLF12Q9Y4X4 402 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 SLC25A15Q9Y619 301 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 U3KQA8 63 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 ATG2AQ2TAZ0 1938 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 TAX1BP3O14907 124 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 DLX6P56179 175 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 CR1LQ2VPA4 569 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 FAM104BQ5XKR9 115 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 DDB2Q92466 427 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 LINC00479Q96M42 142 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 ZNF747Q9BV97 191 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 RAXQ9Y2V3 346 aa6.98□□□□□ -1.29
GABRA1-202ENST00000393943 IGHV3-72A0A0B4J1Y9 119 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 HOXA3O43365 443 aaPredicted RBP6.97□□□□□ -1.29
GABRA1-202ENST00000393943 EIF4EBP1Q13541 118 aaPredicted RBP6.97□□□□□ -1.29
GABRA1-202ENST00000393943 TRIP6Q15654 476 aaKnown RBP6.97□□□□□ -1.29
GABRA1-202ENST00000393943 CHAC1Q9BUX1 264 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 PRDM6Q9NQX0 595 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 C21orf62Q9NYP8 219 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 TRBV6-1A0A0K0K1D8 114 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 C9orf172C9J069 976 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 APOMO95445 188 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 LINC00205P59089 165 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 GFRALQ6UXV0 394 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 ZNF562Q6V9R5 426 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 ZNF71Q9NQZ8 489 aaPredicted RBP6.97□□□□□ -1.29
GABRA1-202ENST00000393943 CRXO43186 299 aaPredicted RBP6.97□□□□□ -1.29
GABRA1-202ENST00000393943 IGHV1-46P01743 117 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 RPL11P62913 178 aaKnown RBP6.97□□□□□ -1.29
GABRA1-202ENST00000393943 C17orf58Q2M2W7 97 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 LYZL1Q6UWQ5 148 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 OR10J6PQ8NGY7 276 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 SHANK2-AS3Q9BTD1 123 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 LRP4O75096 1905 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 SH2D7A6NKC9 451 aaPredicted RBP6.97□□□□□ -1.29
GABRA1-202ENST00000393943 APELAP0DMC3 54 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 RBX1P62877 108 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 TTC32Q5I0X7 151 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 ZNF502Q8TBZ5 544 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 SCGB3A1Q96QR1 104 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 TP53TG3Q9ULZ0 132 aa6.97□□□□□ -1.29
GABRA1-202ENST00000393943 ESPL1Q14674 2120 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 PPIAL4CA0A0B4J2A2 164 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 C2orf70A6NJV1 201 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 TMEM238C9JI98 176 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 H3BVH4 76 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 M0R3E3 92 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 IGLV1-44P01699 117 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 IGLC1P0CG04 106 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 PPIAL4GP0DN37 164 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 LAGE3Q14657 143 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 COPS9Q8WXC6 57 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 COL4A2P08572 1712 aa6.96□□□□□ -1.29
GABRA1-202ENST00000393943 CHD3Q12873 2000 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms