RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 SURF2Q15527 256 aaPredicted RBP10.78□□□□□ -0.68
CHMP3-202ENST00000393773 IGF2BP2-AS1Q96M15 143 aa10.78□□□□□ -0.68
CHMP3-202ENST00000393773 C17orf77Q96MU5 243 aa10.78□□□□□ -0.68
CHMP3-202ENST00000393773 ATG101Q9BSB4 218 aa10.78□□□□□ -0.68
CHMP3-202ENST00000393773 MAGT1Q9H0U3 335 aa10.78□□□□□ -0.68
CHMP3-202ENST00000393773 VCX3AQ9NNX9 186 aa10.78□□□□□ -0.68
CHMP3-202ENST00000393773 DOK5Q9P104 306 aa10.78□□□□□ -0.68
CHMP3-202ENST00000393773 HSPB7Q9UBY9 170 aa10.78□□□□□ -0.68
CHMP3-202ENST00000393773 PFDN2Q9UHV9 154 aa10.78□□□□□ -0.68
CHMP3-202ENST00000393773 U3KQ87 197 aa10.78□□□□□ -0.68
CHMP3-202ENST00000393773 PLAC8L1A1L4L8 177 aa10.77□□□□□ -0.69
CHMP3-202ENST00000393773 LYRM9A8MSI8 78 aa10.77□□□□□ -0.69
CHMP3-202ENST00000393773 PRM2P04554 102 aa10.77□□□□□ -0.69
CHMP3-202ENST00000393773 SAMD13Q5VXD3 122 aa10.77□□□□□ -0.69
CHMP3-202ENST00000393773 LGI3Q8N145 548 aa10.77□□□□□ -0.69
CHMP3-202ENST00000393773 DTD1Q8TEA8 209 aa10.77□□□□□ -0.69
CHMP3-202ENST00000393773 IL22RA2Q969J5 263 aa10.77□□□□□ -0.69
CHMP3-202ENST00000393773 RPRMQ9NS64 109 aa10.77□□□□□ -0.69
CHMP3-202ENST00000393773 PRR13Q9NZ81 148 aa10.77□□□□□ -0.69
CHMP3-202ENST00000393773 CACFD1Q9UGQ2 172 aa10.77□□□□□ -0.69
CHMP3-202ENST00000393773 A0A087WXM4 84 aa10.76□□□□□ -0.69
CHMP3-202ENST00000393773 CRXO43186 299 aaPredicted RBP10.76□□□□□ -0.69
CHMP3-202ENST00000393773 MEOX2P50222 304 aa10.76□□□□□ -0.69
CHMP3-202ENST00000393773 MZT2AQ6P582 158 aa10.76□□□□□ -0.69
CHMP3-202ENST00000393773 TMEM208Q9BTX3 173 aa10.76□□□□□ -0.69
CHMP3-202ENST00000393773 SLC25A32Q9H2D1 315 aa10.76□□□□□ -0.69
CHMP3-202ENST00000393773 RBKSQ9H477 322 aa10.76□□□□□ -0.69
CHMP3-202ENST00000393773 GPR132Q9UNW8 380 aa10.76□□□□□ -0.69
CHMP3-202ENST00000393773 IGKV1OR2-108A0A075B7D4 117 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 ZNF705GA8MUZ8 300 aaPredicted RBP10.75□□□□□ -0.69
CHMP3-202ENST00000393773 GABARAPH6UMI1 98 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 M0R2Z0 102 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 GABARAPO95166 117 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 INSP01308 110 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 TSPOP30536 169 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 GPX4P36969 197 aaPredicted RBP10.75□□□□□ -0.69
CHMP3-202ENST00000393773 SSBP1Q04837 148 aaKnown RBP10.75□□□□□ -0.69
CHMP3-202ENST00000393773 OR2F1Q13607 317 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 OR8I2Q8N0Y5 310 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 OR11H7Q8NGC8 314 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 AP3S1Q92572 193 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 SLC35E1Q96K37 410 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 LINC00588Q9Y4M8 146 aa10.75□□□□□ -0.69
CHMP3-202ENST00000393773 CNN1P51911 297 aaKnown RBP10.74□□□□□ -0.69
CHMP3-202ENST00000393773 SMCO1Q147U7 214 aa10.74□□□□□ -0.69
CHMP3-202ENST00000393773 SPINK13Q1W4C9 94 aa10.74□□□□□ -0.69
CHMP3-202ENST00000393773 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.74□□□□□ -0.69
CHMP3-202ENST00000393773 OR4C16Q8NGL9 310 aa10.74□□□□□ -0.69
CHMP3-202ENST00000393773 PPP1R14BQ96C90 147 aa10.74□□□□□ -0.69
CHMP3-202ENST00000393773 C16orf92Q96LL3 132 aa10.74□□□□□ -0.69
CHMP3-202ENST00000393773 TRGV9Q99603 122 aa10.74□□□□□ -0.69
CHMP3-202ENST00000393773 KRTAP1-5Q9BYS1 174 aa10.74□□□□□ -0.69
CHMP3-202ENST00000393773 VPS13BQ7Z7G8 4022 aa10.74□□□□□ -0.69
CHMP3-202ENST00000393773 DMBT1Q9UGM3 2413 aaPredicted RBP10.73□□□□□ -0.69
CHMP3-202ENST00000393773 F5H768 121 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 NUDT3O95989 172 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 FABP1P07148 127 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 DEFB130BP0DP73 79 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 DEFB130AP0DP74 79 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 CCR6P51684 374 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 SPATA12Q7Z6I5 190 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 BAP18Q8IXM2 172 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 THAP8Q8NA92 274 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 C15orf40Q8WUR7 153 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 RNF141Q8WVD5 230 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 MIXL1Q9H2W2 232 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 SCRT2Q9NQ03 307 aa10.73□□□□□ -0.69
CHMP3-202ENST00000393773 A0A0B4J2A0 478 aa10.72□□□□□ -0.69
CHMP3-202ENST00000393773 SNRPGP15A8MWD9 76 aa10.72□□□□□ -0.69
CHMP3-202ENST00000393773 DISC1C4P0D8 188 aa10.72□□□□□ -0.69
CHMP3-202ENST00000393773 ZNF182P17025 639 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-202ENST00000393773 GALR1P47211 349 aa10.72□□□□□ -0.69
CHMP3-202ENST00000393773 ATP5IP56385 69 aaPredicted RBP10.72□□□□□ -0.69
CHMP3-202ENST00000393773 CTF1Q16619 201 aa10.72□□□□□ -0.69
CHMP3-202ENST00000393773 LYZL2Q7Z4W2 148 aa10.72□□□□□ -0.69
CHMP3-202ENST00000393773 SMIM4Q8WVI0 70 aa10.72□□□□□ -0.69
CHMP3-202ENST00000393773 NAA50Q9GZZ1 169 aaKnown RBP10.72□□□□□ -0.69
CHMP3-202ENST00000393773 SHPKQ9UHJ6 478 aa10.72□□□□□ -0.69
CHMP3-202ENST00000393773 FAT1Q14517 4588 aa10.72□□□□□ -0.69
CHMP3-202ENST00000393773 TRAV8-2A0A0B4J237 113 aa10.71□□□□□ -0.69
CHMP3-202ENST00000393773 ZNF98A6NK75 572 aa10.71□□□□□ -0.69
CHMP3-202ENST00000393773 ATP5G1P05496 136 aa10.71□□□□□ -0.69
CHMP3-202ENST00000393773 AZU1P20160 251 aa10.71□□□□□ -0.69
CHMP3-202ENST00000393773 ATP5G3P48201 142 aa10.71□□□□□ -0.69
CHMP3-202ENST00000393773 CCL18P55774 89 aa10.71□□□□□ -0.69
CHMP3-202ENST00000393773 FCN2Q15485 313 aa10.71□□□□□ -0.69
CHMP3-202ENST00000393773 SLC25A22Q9H936 323 aa10.71□□□□□ -0.69
CHMP3-202ENST00000393773 SLC45A2Q9UMX9 530 aa10.71□□□□□ -0.69
CHMP3-202ENST00000393773 TRAV12-2A0A075B6T6 113 aa10.7□□□□□ -0.7
CHMP3-202ENST00000393773 PRSS46E5RG02 174 aa10.7□□□□□ -0.7
CHMP3-202ENST00000393773 BOLA2-SMG1P6H3BVE0 249 aa10.7□□□□□ -0.7
CHMP3-202ENST00000393773 AKAIN1P0CW23 69 aa10.7□□□□□ -0.7
CHMP3-202ENST00000393773 KRTAP10-2P60368 255 aa10.7□□□□□ -0.7
CHMP3-202ENST00000393773 MRPS10P82664 201 aaKnown RBP10.7□□□□□ -0.7
CHMP3-202ENST00000393773 IGFL4Q6B9Z1 124 aa10.7□□□□□ -0.7
CHMP3-202ENST00000393773 RNF182Q8N6D2 247 aa10.7□□□□□ -0.7
CHMP3-202ENST00000393773 OR51S1Q8NGJ8 323 aa10.7□□□□□ -0.7
CHMP3-202ENST00000393773 PRRT1Q99946 306 aa10.7□□□□□ -0.7
CHMP3-202ENST00000393773 RSG1Q9BU20 258 aa10.7□□□□□ -0.7
CHMP3-202ENST00000393773 MYCBP2O75592 4640 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms