RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 RABAC1Q9UI14 185 aa10.04□□□□□ -0.8
USP44-202ENST00000393091 SEC14L6B5MCN3 397 aa10.04□□□□□ -0.8
USP44-202ENST00000393091 MRPS12O15235 138 aaKnown RBP10.04□□□□□ -0.8
USP44-202ENST00000393091 YIF1AO95070 293 aa10.04□□□□□ -0.8
USP44-202ENST00000393091 ZFP69Q49AA0 526 aa10.04□□□□□ -0.8
USP44-202ENST00000393091 STPG3Q8N7X2 389 aa10.04□□□□□ -0.8
USP44-202ENST00000393091 METTL26Q96S19 204 aa10.04□□□□□ -0.8
USP44-202ENST00000393091 TMEM14CQ9P0S9 112 aa10.04□□□□□ -0.8
USP44-202ENST00000393091 PAIP2BQ9ULR5 123 aaKnown RBP10.04□□□□□ -0.8
USP44-202ENST00000393091 EIF5AP63241 154 aaKnown RBP10.03□□□□□ -0.8
USP44-202ENST00000393091 DEFB114Q30KQ6 69 aa10.03□□□□□ -0.8
USP44-202ENST00000393091 hCG_2014768A0A024R1R8 64 aa10.03□□□□□ -0.8
USP44-202ENST00000393091 SEC11BP0C7V7 166 aa10.03□□□□□ -0.8
USP44-202ENST00000393091 CD300CQ08708 224 aa10.03□□□□□ -0.8
USP44-202ENST00000393091 HIST2H2BDQ6DRA6 164 aa10.03□□□□□ -0.8
USP44-202ENST00000393091 DPPA3Q6W0C5 159 aa10.03□□□□□ -0.8
USP44-202ENST00000393091 SUN5Q8TC36 379 aa10.03□□□□□ -0.8
USP44-202ENST00000393091 PXMP4Q9Y6I8 212 aa10.03□□□□□ -0.8
USP44-202ENST00000393091 FOLR2P14207 255 aa10.02□□□□□ -0.8
USP44-202ENST00000393091 C4BPBP20851 252 aa10.02□□□□□ -0.8
USP44-202ENST00000393091 NPPCP23582 126 aa10.02□□□□□ -0.8
USP44-202ENST00000393091 MEOX2P50222 304 aa10.02□□□□□ -0.8
USP44-202ENST00000393091 DNHD1Q96M86 4753 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 MBP02144 154 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 IL4P05112 153 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 CD33P20138 364 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 SAMD13Q5VXD3 122 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 SCGB1C1Q8TD33 95 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 DUX3Q96PT4 197 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 MLXQ9UH92 298 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 JMJD1CQ15652 2540 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 HYPMO75409 117 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 CLINT1Q14677 625 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 BEAN1Q3B7T3 259 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 PHYHIPLQ96FC7 376 aa10.02□□□□□ -0.81
USP44-202ENST00000393091 SMCO3A2RU48 225 aa10.01□□□□□ -0.81
USP44-202ENST00000393091 TSPAN4O14817 238 aa10.01□□□□□ -0.81
USP44-202ENST00000393091 TM4SF20Q53R12 229 aa10.01□□□□□ -0.81
USP44-202ENST00000393091 RPL7L1Q6DKI1 246 aaKnown RBP10.01□□□□□ -0.81
USP44-202ENST00000393091 TMEM37Q8WXS4 190 aa10.01□□□□□ -0.81
USP44-202ENST00000393091 DNAJC4Q9NNZ3 241 aa10.01□□□□□ -0.81
USP44-202ENST00000393091 B2MP61769 119 aa10.01□□□□□ -0.81
USP44-202ENST00000393091 SLC51BQ86UW2 128 aa10.01□□□□□ -0.81
USP44-202ENST00000393091 OR1B1Q8NGR6 318 aa10.01□□□□□ -0.81
USP44-202ENST00000393091 SLC25A39Q9BZJ4 359 aaPredicted RBP10.01□□□□□ -0.81
USP44-202ENST00000393091 HIGD1AQ9Y241 93 aa10.01□□□□□ -0.81
USP44-202ENST00000393091 KANTRA0A1W2PQU2 76 aa10□□□□□ -0.81
USP44-202ENST00000393091 ZNF253O75346 499 aa10□□□□□ -0.81
USP44-202ENST00000393091 ATP6V0CP27449 155 aa10□□□□□ -0.81
USP44-202ENST00000393091 GRAMD2BQ96HH9 432 aa10□□□□□ -0.81
USP44-202ENST00000393091 COL6A5A8TX70 2615 aa10□□□□□ -0.81
USP44-202ENST00000393091 ZNF785A8K8V0 405 aa10□□□□□ -0.81
USP44-202ENST00000393091 MIC13Q5XKP0 118 aa10□□□□□ -0.81
USP44-202ENST00000393091 Q6ZRG5 221 aa10□□□□□ -0.81
USP44-202ENST00000393091 ZNF709Q8N972 641 aa10□□□□□ -0.81
USP44-202ENST00000393091 HELTA6NFD8 242 aa9.99□□□□□ -0.81
USP44-202ENST00000393091 NARS2Q96I59 477 aaKnown RBP9.99□□□□□ -0.81
USP44-202ENST00000393091 C17orf77Q96MU5 243 aa9.99□□□□□ -0.81
USP44-202ENST00000393091 RHPN1-AS1Q9BWJ2 59 aa9.99□□□□□ -0.81
USP44-202ENST00000393091 M6PRP20645 277 aa9.99□□□□□ -0.81
USP44-202ENST00000393091 LCN12Q6JVE5 192 aa9.99□□□□□ -0.81
USP44-202ENST00000393091 ST8SIA2Q92186 375 aa9.99□□□□□ -0.81
USP44-202ENST00000393091 SPAG8Q99932 426 aaPredicted RBP9.99□□□□□ -0.81
USP44-202ENST00000393091 ZNF98A6NK75 572 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 UMAD1C9J7I0 102 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 SOCS3O14543 225 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 CMC4P56277 68 aaPredicted RBP9.98□□□□□ -0.81
USP44-202ENST00000393091 ACOT6Q3I5F7 207 aaPredicted RBP9.98□□□□□ -0.81
USP44-202ENST00000393091 C10orf113Q5VZT2 155 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 A8MZ25 164 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 APOHP02749 345 aaPredicted RBP9.98□□□□□ -0.81
USP44-202ENST00000393091 TPT1P13693 172 aaKnown RBP9.98□□□□□ -0.81
USP44-202ENST00000393091 TMEM41BQ5BJD5 291 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 BAP18Q8IXM2 172 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 ARL6IP6Q8N6S5 226 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 FAM167A-AS1Q96KT0 104 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 SMIM3Q9BZL3 60 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 FUT9Q9Y231 359 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 RAB5CP51148 216 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 RSG1Q9BU20 258 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 ARL6Q9H0F7 186 aa9.98□□□□□ -0.81
USP44-202ENST00000393091 ZNF256Q9Y2P7 627 aaPredicted RBP9.98□□□□□ -0.81
USP44-202ENST00000393091 TRRAPQ9Y4A5 3859 aa9.97□□□□□ -0.81
USP44-202ENST00000393091 LYZP61626 148 aa9.97□□□□□ -0.81
USP44-202ENST00000393091 PMS2P11Q13670 270 aa9.97□□□□□ -0.81
USP44-202ENST00000393091 STXBP6Q8NFX7 210 aa9.97□□□□□ -0.81
USP44-202ENST00000393091 IGLC2P0DOY2 106 aa9.97□□□□□ -0.81
USP44-202ENST00000393091 GATA2P23769 480 aaPredicted RBP9.97□□□□□ -0.81
USP44-202ENST00000393091 GUK1Q16774 197 aa9.97□□□□□ -0.81
USP44-202ENST00000393091 CLEC5AQ9NY25 188 aa9.97□□□□□ -0.81
USP44-202ENST00000393091 SMAD5-AS1Q9Y6J3 95 aa9.97□□□□□ -0.81
USP44-202ENST00000393091 COX7A2P2O60397 106 aa9.96□□□□□ -0.81
USP44-202ENST00000393091 GP9P14770 177 aa9.96□□□□□ -0.81
USP44-202ENST00000393091 EDN2P20800 178 aa9.96□□□□□ -0.81
USP44-202ENST00000393091 FFAR4Q5NUL3 377 aa9.96□□□□□ -0.81
USP44-202ENST00000393091 DCANP1Q8TF63 244 aa9.96□□□□□ -0.81
USP44-202ENST00000393091 CLUHP3Q96NS8 147 aa9.96□□□□□ -0.81
USP44-202ENST00000393091 SLC25A2Q9BXI2 301 aa9.96□□□□□ -0.81
USP44-202ENST00000393091 VWFP04275 2813 aa9.96□□□□□ -0.81
USP44-202ENST00000393091 ZNF320A2RRD8 509 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms