RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 NDUFS7O75251 213 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 NDUFB4O95168 129 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 ARL16Q0P5N6 197 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 CR1LQ2VPA4 569 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 TMEM97Q5BJF2 176 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 HARBI1Q96MB7 349 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 UBTD1Q9HAC8 227 aa15.36■□□□□ 0.05
CCDC50-202ENST00000392456 TRBV20OR9-2A0A075B6H5 130 aa15.35■□□□□ 0.05
CCDC50-202ENST00000392456 PGLYRP1O75594 196 aaPredicted RBP15.35■□□□□ 0.05
CCDC50-202ENST00000392456 C17orf58Q2M2W7 97 aa15.35■□□□□ 0.05
CCDC50-202ENST00000392456 C2orf91Q6ZV80 131 aa15.35■□□□□ 0.05
CCDC50-202ENST00000392456 C5orf30Q96GV9 206 aa15.35■□□□□ 0.05
CCDC50-202ENST00000392456 CITED1Q99966 193 aa15.35■□□□□ 0.05
CCDC50-202ENST00000392456 YAE1D1Q9NRH1 226 aa15.35■□□□□ 0.05
CCDC50-202ENST00000392456 SLC17A3O00476 420 aa15.35■□□□□ 0.05
CCDC50-202ENST00000392456 LEAP2Q969E1 77 aa15.35■□□□□ 0.05
CCDC50-202ENST00000392456 C1RLQ9NZP8 487 aa15.35■□□□□ 0.05
CCDC50-202ENST00000392456 SLC25A10Q9UBX3 287 aaPredicted RBP15.35■□□□□ 0.05
CCDC50-202ENST00000392456 VWC2LB2RUY7 222 aa15.34■□□□□ 0.05
CCDC50-202ENST00000392456 GNG4P50150 75 aa15.34■□□□□ 0.05
CCDC50-202ENST00000392456 TNXAQ16473 311 aa15.34■□□□□ 0.05
CCDC50-202ENST00000392456 DTX2Q86UW9 622 aa15.34■□□□□ 0.05
CCDC50-202ENST00000392456 HIST1H1EP10412 219 aaKnown RBP15.34■□□□□ 0.05
CCDC50-202ENST00000392456 LOXL3P58215 753 aa15.34■□□□□ 0.05
CCDC50-202ENST00000392456 LINC00205P59089 165 aa15.34■□□□□ 0.05
CCDC50-202ENST00000392456 KIR3DL3Q8N743 410 aa15.34■□□□□ 0.05
CCDC50-202ENST00000392456 LSM10Q969L4 123 aaKnown RBP15.34■□□□□ 0.05
CCDC50-202ENST00000392456 FAM234AQ9H0X4 552 aa15.34■□□□□ 0.05
CCDC50-202ENST00000392456 CALYQ9NYX4 217 aa15.34■□□□□ 0.05
CCDC50-202ENST00000392456 CELSR2Q9HCU4 2923 aa15.33■□□□□ 0.05
CCDC50-202ENST00000392456 M0R2Z0 102 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 SPINT2O43291 252 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 ACSM6Q6P461 480 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 ADAMTSL5Q6ZMM2 481 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 OR10X1Q8NGY0 326 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 OR51H1Q8NH63 302 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 TMEM70Q9BUB7 260 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 KCNS2Q9ULS6 477 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 A6NDN8 102 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 ZNF134P52741 427 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 FOXE3Q13461 319 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 DRAM1Q8N682 238 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 TAF15Q92804 592 aaKnown RBP eCLIP15.33■□□□□ 0.04
CCDC50-202ENST00000392456 RAB1CQ92928 201 aa15.33■□□□□ 0.04
CCDC50-202ENST00000392456 SPANXB1Q9NS25 103 aaPredicted RBP15.33■□□□□ 0.04
CCDC50-202ENST00000392456 USP9YO00507 2555 aaPredicted RBP15.32■□□□□ 0.04
CCDC50-202ENST00000392456 CRXO43186 299 aaPredicted RBP15.32■□□□□ 0.04
CCDC50-202ENST00000392456 RPEL1Q2QD12 228 aa15.32■□□□□ 0.04
CCDC50-202ENST00000392456 COX19Q49B96 90 aa15.32■□□□□ 0.04
CCDC50-202ENST00000392456 RAB1BQ9H0U4 201 aa15.32■□□□□ 0.04
CCDC50-202ENST00000392456 OR2D2Q9H210 308 aa15.32■□□□□ 0.04
CCDC50-202ENST00000392456 TIMM9Q9Y5J7 89 aa15.32■□□□□ 0.04
CCDC50-202ENST00000392456 HSBP1O75506 76 aa15.32■□□□□ 0.04
CCDC50-202ENST00000392456 MMD2Q8IY49 270 aa15.32■□□□□ 0.04
CCDC50-202ENST00000392456 OCC1Q8TAD7 63 aa15.32■□□□□ 0.04
CCDC50-202ENST00000392456 GNG12Q9UBI6 72 aa15.32■□□□□ 0.04
CCDC50-202ENST00000392456 UFC1Q9Y3C8 167 aa15.32■□□□□ 0.04
CCDC50-202ENST00000392456 KBTBD11-OT1A0A1B0GTJ5 212 aa15.31■□□□□ 0.04
CCDC50-202ENST00000392456 ZNF585BQ52M93 769 aa15.31■□□□□ 0.04
CCDC50-202ENST00000392456 SPAG8Q99932 426 aaPredicted RBP15.31■□□□□ 0.04
CCDC50-202ENST00000392456 ISLRO14498 428 aa15.31■□□□□ 0.04
CCDC50-202ENST00000392456 ATP5G3P48201 142 aa15.31■□□□□ 0.04
CCDC50-202ENST00000392456 RPL31P62899 125 aaKnown RBP15.31■□□□□ 0.04
CCDC50-202ENST00000392456 OR4C12Q96R67 309 aa15.31■□□□□ 0.04
CCDC50-202ENST00000392456 TRGV10A0A0A0MS01 117 aa15.3■□□□□ 0.04
CCDC50-202ENST00000392456 B5MCH6 92 aa15.3■□□□□ 0.04
CCDC50-202ENST00000392456 CCL3L1P16619 93 aa15.3■□□□□ 0.04
CCDC50-202ENST00000392456 F2RP25116 425 aa15.3■□□□□ 0.04
CCDC50-202ENST00000392456 KIR3DS1Q14943 382 aa15.3■□□□□ 0.04
CCDC50-202ENST00000392456 TRAT1Q6PIZ9 186 aa15.3■□□□□ 0.04
CCDC50-202ENST00000392456 RAX2Q96IS3 184 aa15.3■□□□□ 0.04
CCDC50-202ENST00000392456 RAB40CQ96S21 281 aa15.3■□□□□ 0.04
CCDC50-202ENST00000392456 KCNIP2Q9NS61 270 aa15.3■□□□□ 0.04
CCDC50-202ENST00000392456 ARHGAP32A7KAX9 2087 aa15.3■□□□□ 0.04
CCDC50-202ENST00000392456 TENM4Q6N022 2769 aa15.3■□□□□ 0.04
CCDC50-202ENST00000392456 PROP1O75360 226 aa15.29■□□□□ 0.04
CCDC50-202ENST00000392456 TMEM200BQ69YZ2 307 aa15.29■□□□□ 0.04
CCDC50-202ENST00000392456 OR52E5Q8NH55 327 aa15.29■□□□□ 0.04
CCDC50-202ENST00000392456 H1FXQ92522 213 aaKnown RBP15.29■□□□□ 0.04
CCDC50-202ENST00000392456 MS4A6AQ9H2W1 248 aa15.29■□□□□ 0.04
CCDC50-202ENST00000392456 FBN2P35556 2912 aa15.29■□□□□ 0.04
CCDC50-202ENST00000392456 POLQO75417 2590 aa15.29■□□□□ 0.04
CCDC50-202ENST00000392456 RPL30P62888 115 aaKnown RBP15.29■□□□□ 0.04
CCDC50-202ENST00000392456 ATP5G2Q06055 141 aa15.29■□□□□ 0.04
CCDC50-202ENST00000392456 C1orf229Q6ZS94 237 aaPredicted RBP15.29■□□□□ 0.04
CCDC50-202ENST00000392456 C8orf86Q6ZUL3 223 aa15.29■□□□□ 0.04
CCDC50-202ENST00000392456 KAAG1Q9UBP8 84 aa15.29■□□□□ 0.04
CCDC50-202ENST00000392456 HSPB8Q9UJY1 196 aa15.29■□□□□ 0.04
CCDC50-202ENST00000392456 NDUFB3O43676 98 aa15.28■□□□□ 0.04
CCDC50-202ENST00000392456 ATP5J2P56134 94 aa15.28■□□□□ 0.04
CCDC50-202ENST00000392456 CX3CL1P78423 397 aa15.28■□□□□ 0.04
CCDC50-202ENST00000392456 OR10G9Q8NGN4 311 aa15.28■□□□□ 0.04
CCDC50-202ENST00000392456 OR10G7Q8NGN6 311 aa15.28■□□□□ 0.04
CCDC50-202ENST00000392456 ZNRD1Q9P1U0 126 aa15.28■□□□□ 0.04
CCDC50-202ENST00000392456 ZNF257Q9Y2Q1 563 aa15.28■□□□□ 0.04
CCDC50-202ENST00000392456 ZNF645Q8N7E2 425 aa15.28■□□□□ 0.04
CCDC50-202ENST00000392456 PMCHL2Q9BQD1 86 aa15.28■□□□□ 0.04
CCDC50-202ENST00000392456 A0A0G2JRQ6 117 aa15.27■□□□□ 0.04
CCDC50-202ENST00000392456 HLA-DQA1P01909 254 aa15.27■□□□□ 0.04
CCDC50-202ENST00000392456 APOA2P02652 100 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms