RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ZNF114Q8NC26 417 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 AMELYQ99218 206 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 GTSF1LQ9H1H1 148 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 CD300EQ496F6 205 aaPredicted RBP12.29□□□□□ -0.44
CCDC50-201ENST00000392455 COLCA1Q6ZS62 124 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 SRSF7Q16629 238 aaKnown RBP eCLIP12.29□□□□□ -0.44
CCDC50-201ENST00000392455 RNF166Q96A37 237 aaPredicted RBP12.28□□□□□ -0.44
CCDC50-201ENST00000392455 hADV29S1A0JD25 119 aa12.28□□□□□ -0.44
CCDC50-201ENST00000392455 PROB1E7EW31 1015 aa12.28□□□□□ -0.44
CCDC50-201ENST00000392455 TCRAP04437 139 aa12.28□□□□□ -0.44
CCDC50-201ENST00000392455 SRSF8Q9BRL6 282 aaKnown RBP12.28□□□□□ -0.44
CCDC50-201ENST00000392455 FAM181AQ8N9Y4 354 aa12.28□□□□□ -0.44
CCDC50-201ENST00000392455 NCOA6Q14686 2063 aaPredicted RBP12.28□□□□□ -0.44
CCDC50-201ENST00000392455 IGHV3-35A0A0C4DH35 117 aa12.28□□□□□ -0.44
CCDC50-201ENST00000392455 TMEM14DPA8MWL7 114 aa12.27□□□□□ -0.44
CCDC50-201ENST00000392455 C9orf139Q6ZV77 190 aa12.27□□□□□ -0.44
CCDC50-201ENST00000392455 RNF5Q99942 180 aa12.27□□□□□ -0.44
CCDC50-201ENST00000392455 ZNF138P52744 262 aa12.27□□□□□ -0.44
CCDC50-201ENST00000392455 ZXDCQ2QGD7 858 aaPredicted RBP12.27□□□□□ -0.44
CCDC50-201ENST00000392455 RNASE7Q9H1E1 156 aaKnown RBP12.27□□□□□ -0.44
CCDC50-201ENST00000392455 TEX38Q6PEX7 206 aa12.27□□□□□ -0.45
CCDC50-201ENST00000392455 GFRA4Q9GZZ7 299 aa12.27□□□□□ -0.45
CCDC50-201ENST00000392455 C1orf194Q5T5A4 169 aa12.27□□□□□ -0.45
CCDC50-201ENST00000392455 AGRNO00468 2067 aa12.27□□□□□ -0.45
CCDC50-201ENST00000392455 A0A1B0GW64 132 aa12.27□□□□□ -0.45
CCDC50-201ENST00000392455 CRLF1O75462 422 aa12.27□□□□□ -0.45
CCDC50-201ENST00000392455 C9JAW5 83 aa12.27□□□□□ -0.45
CCDC50-201ENST00000392455 TPTE2P1Q5T6R2 138 aa12.27□□□□□ -0.45
CCDC50-201ENST00000392455 TRBV24-1A0A075B6N3 115 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 MP68P56378 58 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 MRPS18CQ9Y3D5 142 aaKnown RBP12.26□□□□□ -0.45
CCDC50-201ENST00000392455 LOC101059948A0A1B0GTJ6 334 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 FUSP35637 526 aaKnown RBP eCLIP12.26□□□□□ -0.45
CCDC50-201ENST00000392455 KIR3DS1Q14943 382 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 IGLV1-36A0A0B4J1U3 117 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 K7ERS5 55 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 LINC00271P0C7V0 271 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 PCOLCEQ15113 449 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 ARHGAP21Q5T5U3 1957 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 TRAV1-1A0A0B4J248 108 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 HIST1H2BKO60814 126 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 HIST1H2BJP06899 126 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 HIST1H2BOP23527 126 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 HIST1H2BBP33778 126 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 TIMP3P35625 211 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 HIST1H2BDP58876 126 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 HIST1H2BCP62807 126 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 HIST2H2BEQ16778 126 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.26□□□□□ -0.45
CCDC50-201ENST00000392455 MINOS1Q5TGZ0 78 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 TRPT1Q86TN4 253 aaKnown RBP12.26□□□□□ -0.45
CCDC50-201ENST00000392455 STPG4Q8N801 248 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 HIST1H2BHQ93079 126 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 HIST1H2BNQ99877 126 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 HIST1H2BMQ99879 126 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 MINOS1-NBL1R4GNA1 71 aa12.26□□□□□ -0.45
CCDC50-201ENST00000392455 GATA2P23769 480 aaPredicted RBP12.25□□□□□ -0.45
CCDC50-201ENST00000392455 GUSBP1Q15486 140 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 FAM223BA6NKX1 122 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 FAM223AQ8IWN6 122 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 MAJINQ3KP22 176 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 FBLIM1Q8WUP2 373 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 USF3Q68DE3 2245 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 MALRD1Q5VYJ5 2156 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 CTSBP07858 339 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 TRGV9Q99603 122 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 IGHV3OR16-13A0A075B7E8 117 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 IGHV3-49A0A0A0MS15 119 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 IGHV3-74A0A0B4J1X5 117 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 CCL3L1P16619 93 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 TMEM133Q9H2Q1 129 aa12.25□□□□□ -0.45
CCDC50-201ENST00000392455 GAGE12JA6NER3 117 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 GAGE1Q13065 139 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 GAGE4Q13068 117 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 GAGE5Q13069 117 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 GAGE6Q13070 117 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 DLEU1O43261 78 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 RPL39P5Q59GN2 51 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 TEX48A0A1B0GUV7 120 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 ZNF876PQ49A33 203 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 RFNGQ9Y644 331 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 S4R3C0 116 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 TFF3Q07654 80 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 EPOPA6NHQ4 379 aa12.24□□□□□ -0.45
CCDC50-201ENST00000392455 LHBP01229 141 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 MUC21Q5SSG8 566 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 ADAMTSL5Q6ZMM2 481 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 MIR17HGQ75NE6 70 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 OR11H6Q8NGC7 330 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 OBSL1O75147 1896 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 FNDC10F2Z333 226 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 NDUFS5O43920 106 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 KLRD1Q13241 179 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 ACTL10Q5JWF8 245 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 HEPN1Q6WQI6 88 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 A0A1W2PRX2 142 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 WISP3O95389 354 aaPredicted RBP12.23□□□□□ -0.45
CCDC50-201ENST00000392455 RSPO4Q2I0M5 234 aaPredicted RBP12.23□□□□□ -0.45
CCDC50-201ENST00000392455 HIST1H2BLQ99880 126 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms