RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 TMEM200BQ69YZ2 307 aa11.2□□□□□ -0.62
CCDC57-203ENST00000392343 TEX45Q8NA69 505 aa11.2□□□□□ -0.62
CCDC57-203ENST00000392343 PERPQ96FX8 193 aa11.2□□□□□ -0.62
CCDC57-203ENST00000392343 IGLV3-9A0A075B6K5 115 aa11.19□□□□□ -0.62
CCDC57-203ENST00000392343 HSBP1L1C9JCN9 74 aa11.19□□□□□ -0.62
CCDC57-203ENST00000392343 CNTFRP26992 372 aa11.19□□□□□ -0.62
CCDC57-203ENST00000392343 SUB1P53999 127 aaKnown RBP eCLIP11.19□□□□□ -0.62
CCDC57-203ENST00000392343 GUCD1Q96NT3 240 aa11.19□□□□□ -0.62
CCDC57-203ENST00000392343 PRSS22Q9GZN4 317 aa11.19□□□□□ -0.62
CCDC57-203ENST00000392343 ST20Q9HBF5 79 aa11.19□□□□□ -0.62
CCDC57-203ENST00000392343 TCRAP04437 139 aa11.19□□□□□ -0.62
CCDC57-203ENST00000392343 TMEM167AQ8TBQ9 72 aa11.19□□□□□ -0.62
CCDC57-203ENST00000392343 TMEM191AQ9H0A3 160 aa11.19□□□□□ -0.62
CCDC57-203ENST00000392343 LINC00312Q9Y6C7 94 aa11.19□□□□□ -0.62
CCDC57-203ENST00000392343 TRAV30A0A087WSZ9 112 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 TM4SF5O14894 197 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 CRXO43186 299 aaPredicted RBP11.18□□□□□ -0.62
CCDC57-203ENST00000392343 IGLV2-23P01705 113 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 S100A7P31151 101 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 GATA4P43694 442 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 TIMM23BQ5SRD1 257 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 RBPMS2Q6ZRY4 209 aaKnown RBP11.18□□□□□ -0.62
CCDC57-203ENST00000392343 GOLT1AQ6ZVE7 132 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 VPS25Q9BRG1 176 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 MAP1LC3CQ9BXW4 147 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 NCOR1P1Q9H4R4 102 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 TRAV17A0A0B4J275 112 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 C19orf71A6NCJ1 209 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 HTR1DP28221 377 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 DEFB109BQ30KR1 87 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 ANKRD39Q53RE8 183 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 LYPD2Q6UXB3 125 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 DEFB123Q8N688 67 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 KLF12Q9Y4X4 402 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 SVEP1Q4LDE5 3571 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 LTAP01374 205 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 FXYD7P58549 80 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 SAPCD1Q5SSQ6 148 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 THAP8Q8NA92 274 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 CCL17Q92583 94 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 SCRT2Q9NQ03 307 aa11.18□□□□□ -0.62
CCDC57-203ENST00000392343 NCR2O95944 276 aa11.17□□□□□ -0.62
CCDC57-203ENST00000392343 LYZP61626 148 aa11.17□□□□□ -0.62
CCDC57-203ENST00000392343 C5orf17Q8NAS9 161 aa11.17□□□□□ -0.62
CCDC57-203ENST00000392343 CHCHD1Q96BP2 118 aaKnown RBP11.17□□□□□ -0.62
CCDC57-203ENST00000392343 CST9LQ9H4G1 147 aa11.17□□□□□ -0.62
CCDC57-203ENST00000392343 LINC00574Q9H8X3 128 aa11.17□□□□□ -0.62
CCDC57-203ENST00000392343 FAM106CPP0CH98 169 aa11.17□□□□□ -0.62
CCDC57-203ENST00000392343 UQCRFS1P47985 274 aa11.17□□□□□ -0.62
CCDC57-203ENST00000392343 FAM106AQ4KMX7 169 aa11.17□□□□□ -0.62
CCDC57-203ENST00000392343 PIEZO2Q9H5I5 2752 aa11.17□□□□□ -0.62
CCDC57-203ENST00000392343 TRAV8-6A0A0B4J262 113 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 ARMS2P0C7Q2 107 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 GP9P14770 177 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 PSG9Q00887 426 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 COTL1Q14019 142 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 DEFB125Q8N687 156 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 SRSF12Q8WXF0 261 aaKnown RBP11.16□□□□□ -0.62
CCDC57-203ENST00000392343 C17orf77Q96MU5 243 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 NAA38Q9BRA0 125 aaKnown RBP11.16□□□□□ -0.62
CCDC57-203ENST00000392343 LRBAP50851 2863 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.16□□□□□ -0.62
CCDC57-203ENST00000392343 A0A1W2PRD5 423 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 A0A1W2PRF3 423 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 A0A1W2PRM7 423 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 APOHP02749 345 aaPredicted RBP11.16□□□□□ -0.62
CCDC57-203ENST00000392343 LIPFP07098 398 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 VSTM2AQ8TAG5 236 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 FMC1Q96HJ9 113 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 MALRD1Q5VYJ5 2156 aa11.16□□□□□ -0.62
CCDC57-203ENST00000392343 LOC389332A0A1B0GUA5 103 aa11.15□□□□□ -0.62
CCDC57-203ENST00000392343 ARF6P62330 175 aa11.15□□□□□ -0.62
CCDC57-203ENST00000392343 MRGPRG-AS1Q2M3A8 158 aa11.15□□□□□ -0.62
CCDC57-203ENST00000392343 TMEM116Q8NCL8 245 aa11.15□□□□□ -0.62
CCDC57-203ENST00000392343 FAM215AQ9Y5M1 114 aa11.15□□□□□ -0.62
CCDC57-203ENST00000392343 OR5AL1P0C617 328 aa11.15□□□□□ -0.62
CCDC57-203ENST00000392343 SP9P0CG40 484 aa11.15□□□□□ -0.62
CCDC57-203ENST00000392343 STXBP6Q8NFX7 210 aa11.15□□□□□ -0.62
CCDC57-203ENST00000392343 PPIAL4DF5H284 164 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 FAM169BQ8N8A8 192 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 NEU4Q8WWR8 484 aaPredicted RBP11.14□□□□□ -0.63
CCDC57-203ENST00000392343 MBD3L4A6NDZ8 208 aaPredicted RBP11.14□□□□□ -0.63
CCDC57-203ENST00000392343 MBD3L3A6NE82 208 aaPredicted RBP11.14□□□□□ -0.63
CCDC57-203ENST00000392343 MBD3L5A6NJ08 208 aaPredicted RBP11.14□□□□□ -0.63
CCDC57-203ENST00000392343 TNFRSF1AP19438 455 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 CD40P25942 277 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 VMA21Q3ZAQ7 101 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 OCIAD2Q56VL3 154 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 FAM162BQ5T6X4 162 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 Q86TA4 180 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 ZADH2Q8N4Q0 377 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 MBD3L2Q8NHZ7 208 aaPredicted RBP11.14□□□□□ -0.63
CCDC57-203ENST00000392343 NDFIP1Q9BT67 221 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 CACNA1HO95180 2353 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 HLA-DRB1P01911 266 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 RBP4P02753 201 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 RHOGP84095 191 aa11.14□□□□□ -0.63
CCDC57-203ENST00000392343 LOXL1Q08397 574 aaPredicted RBP11.14□□□□□ -0.63
CCDC57-203ENST00000392343 TEX36Q5VZQ5 186 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms