RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 IGF1P05019 195 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 S100A8P05109 93 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 LYZP61626 148 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 TMEM241Q24JQ0 296 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 DEFB112Q30KQ8 113 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 Q56UQ5 140 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 C11orf52Q96A22 123 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 MRPL27Q9P0M9 148 aaKnown RBP8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 S4R3C0 116 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 TRAV41A0A0B4J266 112 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 MDFIC2A0A1B0GVS7 189 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 IGHG2P01859 326 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 BCL6BQ8N143 479 aaPredicted RBP8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 NECAP1Q8NC96 275 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 FXYD5Q96DB9 178 aa8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 HELZ2Q9BYK8 2649 aaKnown RBP8.95□□□□□ -0.98
SMARCAL1-203ENST00000392128 WI2-2373I1.2A0A1W2PRP0 233 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 NDUFB4O95168 129 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 OR2C1O95371 312 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 RHOGP84095 191 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 C15orf32Q32M92 178 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 SAPCD1Q5SSQ6 148 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 ZNF491Q8N8L2 437 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 SCO2A0A1W2PP80 73 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 PYYP10082 97 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 CSPG4Q6UVK1 2322 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 ZNF502Q8TBZ5 544 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 RNF125Q96EQ8 232 aa8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 SLC25A39Q9BZJ4 359 aaPredicted RBP8.94□□□□□ -0.98
SMARCAL1-203ENST00000392128 IER3P46695 156 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 RPL23P62829 140 aaKnown RBP8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 C9orf152Q5JTZ5 239 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 C15orf54Q8N8G6 183 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 WFDC11Q8NEX6 87 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 Q8WTZ3 238 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 GAR1Q9NY12 217 aaKnown RBP8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 OR2T8A6NH00 312 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 GGTLC3B5MD39 225 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 BRI3O95415 125 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 IGHV3-23P01764 117 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 IL4P05112 153 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 CTSGP08311 255 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 GP9P14770 177 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 ZNF343Q6P1L6 599 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 OR5R1Q8NH85 324 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 DERL1Q9BUN8 251 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 TMEM14CQ9P0S9 112 aa8.93□□□□□ -0.98
SMARCAL1-203ENST00000392128 H3BRN7 92 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 IGHV4-59P01825 116 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 ADIRFQ15847 76 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 S100A7AQ86SG5 101 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 ATP6V0BQ99437 205 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 SHANK2-AS3Q9BTD1 123 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 TMEM242Q9NWH2 141 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 ZNF580Q9UK33 172 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 CREBBPQ92793 2442 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 TRBV7-1A0A0A6YYK4 115 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 A0A1B0GV90 55 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 CXorf65A6NEN9 183 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 FAM223BA6NKX1 122 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 COLCA2A8K830 154 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 H3BUA1 57 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 BLCAPP62952 87 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 FAM223AQ8IWN6 122 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 EEF1AKMT3Q96AZ1 226 aa8.92□□□□□ -0.98
SMARCAL1-203ENST00000392128 PPIFP30405 207 aaKnown RBP8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 ADMP35318 185 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 SUMO1P63165 101 aaKnown RBP8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 Q6YL49 198 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 CCDC140Q96MF4 163 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 FOXC2Q99958 501 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 TCEAL7Q9BRU2 100 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 CTDSP1Q9GZU7 261 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 ZANQ9Y493 2812 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 C9JCJ5 164 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 AP4M1O00189 453 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 NBEAP1P0C6P0 100 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 MYCNOSP40205 109 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 USF2Q15853 346 aaPredicted RBP8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 LEMD1Q68G75 181 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 LINC01551Q86U37 167 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 ISOC2Q96AB3 205 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 MS4A10Q96PG2 267 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 CHRDL1Q9BU40 450 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 PRDM13Q9H4Q3 707 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 LINC00527Q9UJ94 153 aa8.91□□□□□ -0.98
SMARCAL1-203ENST00000392128 TRBV20OR9-2A0A075B6H5 130 aa8.9□□□□□ -0.98
SMARCAL1-203ENST00000392128 CRYBB3P26998 211 aa8.9□□□□□ -0.98
SMARCAL1-203ENST00000392128 GPR183P32249 361 aa8.9□□□□□ -0.98
SMARCAL1-203ENST00000392128 ATP5G2Q06055 141 aa8.9□□□□□ -0.98
SMARCAL1-203ENST00000392128 RNF212Q495C1 297 aa8.9□□□□□ -0.98
SMARCAL1-203ENST00000392128 LBHQ53QV2 105 aaPredicted RBP8.9□□□□□ -0.98
SMARCAL1-203ENST00000392128 ZNF329Q86UD4 541 aa8.9□□□□□ -0.98
SMARCAL1-203ENST00000392128 CIARTQ8N365 385 aaPredicted RBP8.9□□□□□ -0.98
SMARCAL1-203ENST00000392128 C2CD4CQ8TF44 421 aa8.9□□□□□ -0.98
SMARCAL1-203ENST00000392128 YPEL4Q96NS1 127 aa8.9□□□□□ -0.98
SMARCAL1-203ENST00000392128 ELOVL1Q9BW60 279 aa8.9□□□□□ -0.98
SMARCAL1-203ENST00000392128 CIDEAO60543 219 aa8.9□□□□□ -0.99
SMARCAL1-203ENST00000392128 MT-ND4LP03901 98 aa8.9□□□□□ -0.99
SMARCAL1-203ENST00000392128 CLEC3BP05452 202 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms