RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 RNF125Q96EQ8 232 aa15□□□□□ -0.01
ERCC2-203ENST00000391944 HSPB9Q9BQS6 159 aa15□□□□□ -0.01
ERCC2-203ENST00000391944 SHANK2-AS3Q9BTD1 123 aa15□□□□□ -0.01
ERCC2-203ENST00000391944 SVEP1Q4LDE5 3571 aa15□□□□□ -0.01
ERCC2-203ENST00000391944 CSMD1Q96PZ7 3565 aa15□□□□□ -0.01
ERCC2-203ENST00000391944 TRAV34A0A0B4J273 112 aa15□□□□□ -0.01
ERCC2-203ENST00000391944 NDUFB8O95169 186 aa15□□□□□ -0.01
ERCC2-203ENST00000391944 HIST1H1BP16401 226 aaKnown RBP15□□□□□ -0.01
ERCC2-203ENST00000391944 IBA57Q5T440 356 aaKnown RBP15□□□□□ -0.01
ERCC2-203ENST00000391944 C5orf17Q8NAS9 161 aa15□□□□□ -0.01
ERCC2-203ENST00000391944 GPR61Q9BZJ8 451 aa15□□□□□ -0.01
ERCC2-203ENST00000391944 C21orf62Q9NYP8 219 aa15□□□□□ -0.01
ERCC2-203ENST00000391944 TRAPPC1Q9Y5R8 145 aa15□□□□□ -0.01
ERCC2-203ENST00000391944 H3BRN7 92 aa14.99□□□□□ -0.01
ERCC2-203ENST00000391944 COA6Q5JTJ3 125 aaKnown RBP14.99□□□□□ -0.01
ERCC2-203ENST00000391944 Q9H3A6 140 aa14.99□□□□□ -0.01
ERCC2-203ENST00000391944 ZNF586Q9NXT0 402 aa14.99□□□□□ -0.01
ERCC2-203ENST00000391944 MYO18BQ8IUG5 2567 aa14.99□□□□□ -0.01
ERCC2-203ENST00000391944 IL4P05112 153 aa14.99□□□□□ -0.01
ERCC2-203ENST00000391944 S100A2P29034 98 aa14.99□□□□□ -0.01
ERCC2-203ENST00000391944 H3BTX0 84 aa14.98□□□□□ -0.01
ERCC2-203ENST00000391944 OR2J3O76001 311 aa14.98□□□□□ -0.01
ERCC2-203ENST00000391944 NHLRC2Q8NBF2 726 aa14.98□□□□□ -0.01
ERCC2-203ENST00000391944 ATG101Q9BSB4 218 aa14.98□□□□□ -0.01
ERCC2-203ENST00000391944 IGHV1-69DA0A0B4J2H0 117 aa14.98□□□□□ -0.01
ERCC2-203ENST00000391944 IGHV1-69P01742 117 aa14.98□□□□□ -0.01
ERCC2-203ENST00000391944 PRB1P04280 392 aa14.98□□□□□ -0.01
ERCC2-203ENST00000391944 Q56UQ5 140 aa14.98□□□□□ -0.01
ERCC2-203ENST00000391944 BPIFA4PQ86YQ2 179 aa14.98□□□□□ -0.01
ERCC2-203ENST00000391944 FAM110DQ8TAY7 271 aaPredicted RBP14.98□□□□□ -0.01
ERCC2-203ENST00000391944 VPS13CQ709C8 3753 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 IGHV4-30-2A0A087WSY4 118 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 XKRY2A2RUG3 117 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 UBE2G1P62253 170 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 KLK9Q2XQG4 91 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 PDZD11Q5EBL8 140 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 FAM231DQ6ZW35 169 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 TMEM183AQ8IXX5 376 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 BBC3Q96PG8 261 aaPredicted RBP14.97□□□□□ -0.01
ERCC2-203ENST00000391944 OTORQ9NRC9 128 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 KLK9Q9UKQ9 250 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 RNF24Q9Y225 148 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 S100A7AQ86SG5 101 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 OR8I2Q8N0Y5 310 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 SMIM12Q96EX1 92 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 TXN2Q99757 166 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 TMUB1Q9BVT8 246 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 FBXL7Q9UJT9 491 aa14.97□□□□□ -0.01
ERCC2-203ENST00000391944 TCRAP04437 139 aa14.96□□□□□ -0.01
ERCC2-203ENST00000391944 FCGR2BP31994 310 aaPredicted RBP14.96□□□□□ -0.01
ERCC2-203ENST00000391944 PCP4L1A6NKN8 68 aa14.95□□□□□ -0.02
ERCC2-203ENST00000391944 ATP6V0E1O15342 81 aa14.95□□□□□ -0.02
ERCC2-203ENST00000391944 USF2Q15853 346 aaPredicted RBP14.95□□□□□ -0.02
ERCC2-203ENST00000391944 UNQ5815/PRO19632Q6UWF5 114 aa14.95□□□□□ -0.02
ERCC2-203ENST00000391944 GPR82Q96P67 336 aa14.95□□□□□ -0.02
ERCC2-203ENST00000391944 SPG11Q96JI7 2443 aa14.95□□□□□ -0.02
ERCC2-203ENST00000391944 SMIM27A0A1W2PRY6 76 aa14.95□□□□□ -0.02
ERCC2-203ENST00000391944 IGLC2P0DOY2 106 aa14.95□□□□□ -0.02
ERCC2-203ENST00000391944 OR4F17Q8NGA8 305 aa14.95□□□□□ -0.02
ERCC2-203ENST00000391944 VN1R17PQ8TDU5 208 aa14.95□□□□□ -0.02
ERCC2-203ENST00000391944 TMEM190Q8WZ59 177 aa14.95□□□□□ -0.02
ERCC2-203ENST00000391944 FMC1Q96HJ9 113 aa14.95□□□□□ -0.02
ERCC2-203ENST00000391944 UTP20O75691 2785 aaKnown RBP14.95□□□□□ -0.02
ERCC2-203ENST00000391944 TRBV19A0A075B6N1 114 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 IGHV3OR16-10A0A075B7F0 116 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 CTSGP08311 255 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 C5orf56Q8N8D9 126 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 MLST8Q9BVC4 326 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 SERTAD4Q9NUC0 356 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 RPH3ALQ9UNE2 315 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 ZFYVE26Q68DK2 2539 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 ZNF705GA8MUZ8 300 aaPredicted RBP14.94□□□□□ -0.02
ERCC2-203ENST00000391944 MRPS12O15235 138 aaKnown RBP14.94□□□□□ -0.02
ERCC2-203ENST00000391944 IGHV3-23P01764 117 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 RPL19P84098 196 aaKnown RBP14.94□□□□□ -0.02
ERCC2-203ENST00000391944 OR10D4PQ8NGN7 298 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 C7orf69Q9H7B7 122 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 CRYBG3Q68DQ2 2970 aa14.94□□□□□ -0.02
ERCC2-203ENST00000391944 TRAV40A0A0B4J280 105 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 OR2T8A6NH00 312 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 SCGB2A1O75556 95 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 ECSCRQ19T08 205 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 BCL6BQ8N143 479 aaPredicted RBP14.93□□□□□ -0.02
ERCC2-203ENST00000391944 NUDT10Q8NFP7 164 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 NUDT11Q96G61 164 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 SGK494Q96LW2 274 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 MEGF9Q9H1U4 602 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 FABP4P15090 132 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 CBLN1P23435 193 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 EXOC3-AS1Q8N2X6 119 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 PIFOQ8TCI5 191 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 MBD6Q96DN6 1003 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 HIST1H2BLQ99880 126 aa14.93□□□□□ -0.02
ERCC2-203ENST00000391944 LINC01548A6NM66 108 aa14.92□□□□□ -0.02
ERCC2-203ENST00000391944 BRD3OSQ6XYD6 125 aa14.92□□□□□ -0.02
ERCC2-203ENST00000391944 LYPD1Q8N2G4 141 aa14.92□□□□□ -0.02
ERCC2-203ENST00000391944 C17orf77Q96MU5 243 aa14.92□□□□□ -0.02
ERCC2-203ENST00000391944 CHRDL1Q9BU40 450 aa14.92□□□□□ -0.02
ERCC2-203ENST00000391944 NIT2Q9NQR4 276 aa14.92□□□□□ -0.02
ERCC2-203ENST00000391944 TRBV9A0A0B4J1U6 114 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms