RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 NRN1Q9NPD7 142 aa9.37□□□□□ -0.91
GGPS1-203ENST00000391855 MGAT4CQ9UBM8 478 aa9.37□□□□□ -0.91
GGPS1-203ENST00000391855 STAB2Q8WWQ8 2551 aa9.37□□□□□ -0.91
GGPS1-203ENST00000391855 SMCO3A2RU48 225 aa9.36□□□□□ -0.91
GGPS1-203ENST00000391855 METTL15P1P0C7V9 234 aa9.36□□□□□ -0.91
GGPS1-203ENST00000391855 RPL35AP18077 110 aaKnown RBP9.36□□□□□ -0.91
GGPS1-203ENST00000391855 SELENOTP62341 195 aa9.36□□□□□ -0.91
GGPS1-203ENST00000391855 OR2F1Q13607 317 aa9.36□□□□□ -0.91
GGPS1-203ENST00000391855 OVOL2Q9BRP0 275 aa9.36□□□□□ -0.91
GGPS1-203ENST00000391855 C7orf66A4D0T2 115 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 K7EPK0 472 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 SPRY2O43597 315 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 ZNF688P0C7X2 276 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 LYL1P12980 280 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 SNRPD3P62318 126 aaKnown RBP9.35□□□□□ -0.91
GGPS1-203ENST00000391855 IFITM3Q01628 133 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 TMEM41BQ5BJD5 291 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 S100A7AQ86SG5 101 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 STHQ8IWL8 128 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 FAM24BQ8N5W8 94 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 CSTL1Q9H114 145 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 NPVFQ9HCQ7 196 aa9.35□□□□□ -0.91
GGPS1-203ENST00000391855 INMT-MINDY4F8WBC2 141 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 MEOX2P50222 304 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 ZNF124Q15973 351 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 DEFB135Q30KP9 77 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 LEMD1Q68G75 181 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 CYP2G1PQ6ZSU1 146 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 NRARPQ7Z6K4 114 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 GATAD1Q8WUU5 269 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 RNF183Q96D59 192 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 GPR82Q96P67 336 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 TMEM147Q9BVK8 224 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 RNF24Q9Y225 148 aa9.34□□□□□ -0.91
GGPS1-203ENST00000391855 LSM5Q9Y4Y9 91 aaKnown RBP9.34□□□□□ -0.91
GGPS1-203ENST00000391855 RAP2BP61225 183 aa9.33□□□□□ -0.92
GGPS1-203ENST00000391855 RRAS2P62070 204 aaPredicted RBP9.33□□□□□ -0.92
GGPS1-203ENST00000391855 MORN3Q6PF18 240 aaPredicted RBP9.33□□□□□ -0.92
GGPS1-203ENST00000391855 TEPPQ6URK8 271 aa9.33□□□□□ -0.92
GGPS1-203ENST00000391855 OR8I2Q8N0Y5 310 aa9.33□□□□□ -0.92
GGPS1-203ENST00000391855 MARVELD1Q9BSK0 173 aa9.33□□□□□ -0.92
GGPS1-203ENST00000391855 DEDDO75618 318 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 CCNKO75909 580 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 SPP1P10451 314 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 ID1P41134 155 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 GALR1P47211 349 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 BCAP31P51572 246 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 CAV2P51636 162 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 PLP1P60201 277 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 S100A10P60903 97 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 IL15RAQ13261 267 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 PSMG4Q5JS54 123 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 CASC10Q5T4H9 136 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 PXDC1Q5TGL8 231 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 TRPT1Q86TN4 253 aaKnown RBP9.32□□□□□ -0.92
GGPS1-203ENST00000391855 ZNF546Q86UE3 836 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 C11orf1Q9H5F2 150 aa9.32□□□□□ -0.92
GGPS1-203ENST00000391855 CA1P00915 261 aaPredicted RBP9.31□□□□□ -0.92
GGPS1-203ENST00000391855 LINC00869P0C866 280 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 ATF4P18848 351 aaPredicted RBP9.31□□□□□ -0.92
GGPS1-203ENST00000391855 ORM2P19652 201 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 PSMB3P49720 205 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 CYCSP99999 105 aaKnown RBP9.31□□□□□ -0.92
GGPS1-203ENST00000391855 SLC38A11Q08AI6 406 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 RAB32Q13637 225 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 STX12Q86Y82 276 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 TMEM217Q8N7C4 229 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 OR1B1Q8NGR6 318 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 LYRM2Q9NU23 88 aaPredicted RBP9.31□□□□□ -0.92
GGPS1-203ENST00000391855 HIGD1AQ9Y241 93 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 TENM3Q9P273 2699 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 ZNF98A6NK75 572 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 ISLRO14498 428 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 HYPMO75409 117 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 GATA2P23769 480 aaPredicted RBP9.31□□□□□ -0.92
GGPS1-203ENST00000391855 SULT1A1P50225 295 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 HBG1P69891 147 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 HBG2P69892 147 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 RAB31Q13636 194 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 NMES1Q9C002 83 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 SLC25A32Q9H2D1 315 aa9.31□□□□□ -0.92
GGPS1-203ENST00000391855 H3BRN7 92 aa9.3□□□□□ -0.92
GGPS1-203ENST00000391855 GOSR2O14653 212 aa9.3□□□□□ -0.92
GGPS1-203ENST00000391855 RLN2P04090 185 aa9.3□□□□□ -0.92
GGPS1-203ENST00000391855 RPL7P18124 248 aaKnown RBP9.3□□□□□ -0.92
GGPS1-203ENST00000391855 S100A11P31949 105 aa9.3□□□□□ -0.92
GGPS1-203ENST00000391855 ARL16Q0P5N6 197 aa9.3□□□□□ -0.92
GGPS1-203ENST00000391855 ACTL10Q5JWF8 245 aa9.3□□□□□ -0.92
GGPS1-203ENST00000391855 SPATA31B1PQ5VZV4 182 aa9.3□□□□□ -0.92
GGPS1-203ENST00000391855 TMEM182Q6ZP80 229 aaPredicted RBP9.3□□□□□ -0.92
GGPS1-203ENST00000391855 SHANK2-AS3Q9BTD1 123 aa9.3□□□□□ -0.92
GGPS1-203ENST00000391855 SLC25A39Q9BZJ4 359 aaPredicted RBP9.3□□□□□ -0.92
GGPS1-203ENST00000391855 SLC25A22Q9H936 323 aa9.3□□□□□ -0.92
GGPS1-203ENST00000391855 UQCC1Q9NVA1 299 aa9.3□□□□□ -0.92
GGPS1-203ENST00000391855 DNAH7Q8WXX0 4024 aa9.29□□□□□ -0.92
GGPS1-203ENST00000391855 FAM24AA6NFZ4 105 aa9.29□□□□□ -0.92
GGPS1-203ENST00000391855 KNCNA6PVL3 124 aa9.29□□□□□ -0.92
GGPS1-203ENST00000391855 SOCS3O14543 225 aa9.29□□□□□ -0.92
GGPS1-203ENST00000391855 AGPAT2O15120 278 aa9.29□□□□□ -0.92
GGPS1-203ENST00000391855 OR5G3P0C626 314 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms