RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 NBR2O15453 112 aa13.3□□□□□ -0.28
SHANK1-204ENST00000391814 MORN3Q6PF18 240 aaPredicted RBP13.3□□□□□ -0.28
SHANK1-204ENST00000391814 FAM90A1Q86YD7 464 aa13.3□□□□□ -0.28
SHANK1-204ENST00000391814 A0A1W2PPM0 123 aa13.3□□□□□ -0.28
SHANK1-204ENST00000391814 DOCK4Q8N1I0 1966 aa13.3□□□□□ -0.28
SHANK1-204ENST00000391814 LAMTOR3Q9UHA4 124 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 K7ERJ3 54 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 EFEMP2O95967 443 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 C18orf32Q8TCD1 76 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 ABHD17AQ96GS6 310 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 IMMP1LQ96LU5 166 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 CSTL1Q9H114 145 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 LTBRP36941 435 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 Q6ZVH6 145 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 IGHV2-26A0A0B4J1V2 119 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 TRACP01848 142 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 A0A0G2JRQ6 117 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 QRFPP83859 136 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 FAM57AQ8TBR7 257 aa13.29□□□□□ -0.28
SHANK1-204ENST00000391814 RHOGP84095 191 aa13.28□□□□□ -0.28
SHANK1-204ENST00000391814 BVES-AS1Q5T3Y7 98 aa13.28□□□□□ -0.28
SHANK1-204ENST00000391814 SIGLEC15Q6ZMC9 328 aa13.28□□□□□ -0.28
SHANK1-204ENST00000391814 ZNF688P0C7X2 276 aa13.28□□□□□ -0.28
SHANK1-204ENST00000391814 PFN1P07737 140 aaKnown RBP13.28□□□□□ -0.28
SHANK1-204ENST00000391814 NRN1LQ496H8 165 aa13.28□□□□□ -0.28
SHANK1-204ENST00000391814 C11orf44Q8N8P7 122 aa13.28□□□□□ -0.28
SHANK1-204ENST00000391814 Q8TAT8 98 aa13.28□□□□□ -0.28
SHANK1-204ENST00000391814 IGHV1-24A0A0C4DH33 117 aa13.28□□□□□ -0.28
SHANK1-204ENST00000391814 LINC00479Q96M42 142 aa13.28□□□□□ -0.28
SHANK1-204ENST00000391814 IGLL1P15814 213 aa13.27□□□□□ -0.28
SHANK1-204ENST00000391814 GLRXP35754 106 aa13.27□□□□□ -0.28
SHANK1-204ENST00000391814 PPDPFLQ8WWR9 84 aa13.27□□□□□ -0.28
SHANK1-204ENST00000391814 VGLL1Q99990 258 aa13.27□□□□□ -0.28
SHANK1-204ENST00000391814 COL5A3P25940 1745 aaPredicted RBP13.27□□□□□ -0.29
SHANK1-204ENST00000391814 VWC2LB2RUY7 222 aa13.27□□□□□ -0.29
SHANK1-204ENST00000391814 NSUN5P1Q3KNT7 163 aa13.27□□□□□ -0.29
SHANK1-204ENST00000391814 IGFL4Q6B9Z1 124 aa13.27□□□□□ -0.29
SHANK1-204ENST00000391814 TMEM167AQ8TBQ9 72 aa13.27□□□□□ -0.29
SHANK1-204ENST00000391814 FAM27E3Q08E93 113 aa13.26□□□□□ -0.29
SHANK1-204ENST00000391814 C10orf55Q5SWW7 151 aa13.26□□□□□ -0.29
SHANK1-204ENST00000391814 C5orf63A6NC05 138 aa13.26□□□□□ -0.29
SHANK1-204ENST00000391814 STHQ8IWL8 128 aa13.26□□□□□ -0.29
SHANK1-204ENST00000391814 CEND1Q8N111 149 aa13.26□□□□□ -0.29
SHANK1-204ENST00000391814 CYYR1Q96J86 154 aa13.26□□□□□ -0.29
SHANK1-204ENST00000391814 B9A039 149 aa13.26□□□□□ -0.29
SHANK1-204ENST00000391814 LINC00205P59089 165 aa13.26□□□□□ -0.29
SHANK1-204ENST00000391814 GHRHP01286 108 aa13.26□□□□□ -0.29
SHANK1-204ENST00000391814 SPTBP11277 2137 aa13.26□□□□□ -0.29
SHANK1-204ENST00000391814 BSPH1Q075Z2 132 aa13.26□□□□□ -0.29
SHANK1-204ENST00000391814 TRGV4A0A0C4DH28 118 aa13.25□□□□□ -0.29
SHANK1-204ENST00000391814 APOBEC3AP31941 199 aaPredicted RBP13.25□□□□□ -0.29
SHANK1-204ENST00000391814 CHCHD5Q9BSY4 110 aa13.25□□□□□ -0.29
SHANK1-204ENST00000391814 JPT2Q9H910 190 aa13.25□□□□□ -0.29
SHANK1-204ENST00000391814 TP53BP1Q12888 1972 aaPredicted RBP13.25□□□□□ -0.29
SHANK1-204ENST00000391814 PAX4O43316 350 aa13.25□□□□□ -0.29
SHANK1-204ENST00000391814 TEX43Q6ZNM6 134 aa13.25□□□□□ -0.29
SHANK1-204ENST00000391814 CFHR2P36980 270 aa13.25□□□□□ -0.29
SHANK1-204ENST00000391814 ETDBQ3ZM63 59 aa13.25□□□□□ -0.29
SHANK1-204ENST00000391814 SMRP1Q8NCR6 262 aa13.25□□□□□ -0.29
SHANK1-204ENST00000391814 UNQ6494/PRO21346Q6UXR6 183 aa13.25□□□□□ -0.29
SHANK1-204ENST00000391814 LEPROTO15243 131 aa13.25□□□□□ -0.29
SHANK1-204ENST00000391814 TMEM86BQ8N661 226 aa13.25□□□□□ -0.29
SHANK1-204ENST00000391814 COX8AP10176 69 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 FAM166AQ6J272 317 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 SPANXA1Q9NS26 97 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 C15orf62A8K5M9 175 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 PPP1R32Q7Z5V6 425 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 SPXQ9BT56 116 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 INS-IGF2F8WCM5 200 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 INSP01308 110 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 ASPHD1Q5U4P2 390 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 GFRA4Q9GZZ7 299 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 CCL25O15444 150 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 SAP25Q8TEE9 199 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 C8orf49Q96NF6 230 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 TRAV13-1A0A0B4J241 112 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 CRYGSP22914 178 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 CEACAM8P31997 349 aaPredicted RBP13.24□□□□□ -0.29
SHANK1-204ENST00000391814 LIME1Q9H400 295 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 MYMXA0A1B0GTQ4 84 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 ARMS2P0C7Q2 107 aa13.24□□□□□ -0.29
SHANK1-204ENST00000391814 TRGV11A0A075B6L2 103 aa13.23□□□□□ -0.29
SHANK1-204ENST00000391814 ZNF726P1Q15940 193 aa13.23□□□□□ -0.29
SHANK1-204ENST00000391814 TMEM213A2RRL7 107 aa13.23□□□□□ -0.29
SHANK1-204ENST00000391814 Q86TA4 180 aa13.23□□□□□ -0.29
SHANK1-204ENST00000391814 H3BMG7 143 aa13.23□□□□□ -0.29
SHANK1-204ENST00000391814 SLAQ13239 276 aa13.23□□□□□ -0.29
SHANK1-204ENST00000391814 ZNF876PQ49A33 203 aa13.23□□□□□ -0.29
SHANK1-204ENST00000391814 TIMM21Q9BVV7 248 aa13.23□□□□□ -0.29
SHANK1-204ENST00000391814 PTPRZ1P23471 2315 aaPredicted RBP13.23□□□□□ -0.29
SHANK1-204ENST00000391814 LINC00473A8K010 186 aa13.23□□□□□ -0.29
SHANK1-204ENST00000391814 C14orf178Q8N769 122 aaPredicted RBP13.23□□□□□ -0.29
SHANK1-204ENST00000391814 C1QTNF4Q9BXJ3 329 aa13.23□□□□□ -0.29
SHANK1-204ENST00000391814 ERCC8Q13216 396 aa13.22□□□□□ -0.29
SHANK1-204ENST00000391814 OVOL2Q9BRP0 275 aa13.22□□□□□ -0.29
SHANK1-204ENST00000391814 TMEM133Q9H2Q1 129 aa13.22□□□□□ -0.29
SHANK1-204ENST00000391814 UCNP55089 124 aa13.22□□□□□ -0.29
SHANK1-204ENST00000391814 C1orf53Q5VUE5 145 aa13.22□□□□□ -0.29
SHANK1-204ENST00000391814 BOD1L2Q8IYS8 172 aa13.22□□□□□ -0.29
SHANK1-204ENST00000391814 PNRC2Q9NPJ4 139 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms