RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 CNN1P51911 297 aaKnown RBP19.71■□□□□ 0.75
SHOX2-201ENST00000389589 CDC42EP3Q9UKI2 254 aa19.71■□□□□ 0.75
SHOX2-201ENST00000389589 A6NDX4 124 aa19.71■□□□□ 0.75
SHOX2-201ENST00000389589 LINC01548A6NM66 108 aa19.71■□□□□ 0.75
SHOX2-201ENST00000389589 K7EN84 100 aa19.71■□□□□ 0.75
SHOX2-201ENST00000389589 PEX7O00628 323 aa19.71■□□□□ 0.75
SHOX2-201ENST00000389589 HNF1AP20823 631 aa19.71■□□□□ 0.75
SHOX2-201ENST00000389589 OR10G8Q8NGN5 311 aa19.71■□□□□ 0.75
SHOX2-201ENST00000389589 TMEM190Q8WZ59 177 aa19.71■□□□□ 0.75
SHOX2-201ENST00000389589 GAR1Q9NY12 217 aaKnown RBP19.71■□□□□ 0.75
SHOX2-201ENST00000389589 PITPNC1Q9UKF7 332 aa19.71■□□□□ 0.75
SHOX2-201ENST00000389589 G3V318 75 aa19.7■□□□□ 0.74
SHOX2-201ENST00000389589 H3BUX3 64 aa19.7■□□□□ 0.74
SHOX2-201ENST00000389589 M0QZK8 103 aa19.7■□□□□ 0.74
SHOX2-201ENST00000389589 RHOGP84095 191 aa19.7■□□□□ 0.74
SHOX2-201ENST00000389589 C15orf32Q32M92 178 aa19.7■□□□□ 0.74
SHOX2-201ENST00000389589 BPIFA4PQ86YQ2 179 aa19.7■□□□□ 0.74
SHOX2-201ENST00000389589 OR2T8A6NH00 312 aa19.69■□□□□ 0.74
SHOX2-201ENST00000389589 S100A6P06703 90 aa19.69■□□□□ 0.74
SHOX2-201ENST00000389589 CTSGP08311 255 aa19.69■□□□□ 0.74
SHOX2-201ENST00000389589 ZNF502Q8TBZ5 544 aa19.69■□□□□ 0.74
SHOX2-201ENST00000389589 PGPA6NDG6 321 aa19.69■□□□□ 0.74
SHOX2-201ENST00000389589 GGCTO75223 188 aaKnown RBP19.69■□□□□ 0.74
SHOX2-201ENST00000389589 IGHV3-23P01764 117 aa19.69■□□□□ 0.74
SHOX2-201ENST00000389589 BTF3L4Q96K17 158 aa19.69■□□□□ 0.74
SHOX2-201ENST00000389589 IGF2BP2-AS1Q96M15 143 aa19.69■□□□□ 0.74
SHOX2-201ENST00000389589 SAV1Q9H4B6 383 aaPredicted RBP19.69■□□□□ 0.74
SHOX2-201ENST00000389589 EPDR1Q9UM22 224 aa19.69■□□□□ 0.74
SHOX2-201ENST00000389589 FBN2P35556 2912 aa19.68■□□□□ 0.74
SHOX2-201ENST00000389589 TRAV41A0A0B4J266 112 aa19.68■□□□□ 0.74
SHOX2-201ENST00000389589 SLC25A5P05141 298 aaKnown RBP19.68■□□□□ 0.74
SHOX2-201ENST00000389589 SOX21Q9Y651 276 aaPredicted RBP19.68■□□□□ 0.74
SHOX2-201ENST00000389589 CELSR2Q9HCU4 2923 aa19.68■□□□□ 0.74
SHOX2-201ENST00000389589 USP9YO00507 2555 aaPredicted RBP19.67■□□□□ 0.74
SHOX2-201ENST00000389589 SNRPCP09234 159 aaKnown RBP19.67■□□□□ 0.74
SHOX2-201ENST00000389589 FOXL1Q12952 345 aa19.67■□□□□ 0.74
SHOX2-201ENST00000389589 USF2Q15853 346 aaPredicted RBP19.67■□□□□ 0.74
SHOX2-201ENST00000389589 LY6EQ16553 131 aa19.67■□□□□ 0.74
SHOX2-201ENST00000389589 C19orf54Q5BKX5 351 aa19.67■□□□□ 0.74
SHOX2-201ENST00000389589 C5orf17Q8NAS9 161 aa19.67■□□□□ 0.74
SHOX2-201ENST00000389589 OR4F17Q8NGA8 305 aa19.67■□□□□ 0.74
SHOX2-201ENST00000389589 Q9H3A6 140 aa19.67■□□□□ 0.74
SHOX2-201ENST00000389589 RNF223E7ERA6 249 aa19.66■□□□□ 0.74
SHOX2-201ENST00000389589 TGFAP01135 160 aa19.66■□□□□ 0.74
SHOX2-201ENST00000389589 S100A7P31151 101 aa19.66■□□□□ 0.74
SHOX2-201ENST00000389589 SRD5A3Q9H8P0 318 aa19.66■□□□□ 0.74
SHOX2-201ENST00000389589 OTORQ9NRC9 128 aa19.66■□□□□ 0.74
SHOX2-201ENST00000389589 ZNF586Q9NXT0 402 aa19.66■□□□□ 0.74
SHOX2-201ENST00000389589 A0A1W2PPQ1 181 aa19.66■□□□□ 0.74
SHOX2-201ENST00000389589 ZNF98A6NK75 572 aa19.66■□□□□ 0.74
SHOX2-201ENST00000389589 GCGP01275 180 aa19.66■□□□□ 0.74
SHOX2-201ENST00000389589 EEF1AKMT3Q96AZ1 226 aa19.66■□□□□ 0.74
SHOX2-201ENST00000389589 IGF1P05019 195 aa19.65■□□□□ 0.74
SHOX2-201ENST00000389589 S100A9P06702 114 aaKnown RBP19.65■□□□□ 0.74
SHOX2-201ENST00000389589 Q5PR19 223 aa19.65■□□□□ 0.74
SHOX2-201ENST00000389589 PTPN13Q12923 2485 aa19.65■□□□□ 0.74
SHOX2-201ENST00000389589 CR1P17927 2039 aa19.65■□□□□ 0.74
SHOX2-201ENST00000389589 TRBV7-1A0A0A6YYK4 115 aa19.64■□□□□ 0.74
SHOX2-201ENST00000389589 PPP5D1E7EU14 171 aa19.64■□□□□ 0.74
SHOX2-201ENST00000389589 IGLV2-8P01709 118 aa19.64■□□□□ 0.74
SHOX2-201ENST00000389589 C9orf152Q5JTZ5 239 aa19.64■□□□□ 0.74
SHOX2-201ENST00000389589 ATG101Q9BSB4 218 aa19.64■□□□□ 0.74
SHOX2-201ENST00000389589 CHRDL1Q9BU40 450 aa19.64■□□□□ 0.74
SHOX2-201ENST00000389589 SVEP1Q4LDE5 3571 aa19.64■□□□□ 0.73
SHOX2-201ENST00000389589 TRGC2P03986 189 aa19.64■□□□□ 0.73
SHOX2-201ENST00000389589 ADMP35318 185 aa19.64■□□□□ 0.73
SHOX2-201ENST00000389589 ERVFC1-1P60608 527 aa19.64■□□□□ 0.73
SHOX2-201ENST00000389589 TMEM183BQ1AE95 376 aa19.64■□□□□ 0.73
SHOX2-201ENST00000389589 ATP6V0BQ99437 205 aa19.64■□□□□ 0.73
SHOX2-201ENST00000389589 IGHG2P01859 326 aa19.63■□□□□ 0.73
SHOX2-201ENST00000389589 IGLC2P0DOY2 106 aa19.63■□□□□ 0.73
SHOX2-201ENST00000389589 MBD6Q96DN6 1003 aa19.63■□□□□ 0.73
SHOX2-201ENST00000389589 OSTCQ9NRP0 149 aa19.63■□□□□ 0.73
SHOX2-201ENST00000389589 KLF12Q9Y4X4 402 aa19.63■□□□□ 0.73
SHOX2-201ENST00000389589 C5orf52A6NGY3 159 aa19.63■□□□□ 0.73
SHOX2-201ENST00000389589 TYMSP04818 313 aa19.63■□□□□ 0.73
SHOX2-201ENST00000389589 GPR183P32249 361 aa19.63■□□□□ 0.73
SHOX2-201ENST00000389589 GNG5P63218 68 aa19.63■□□□□ 0.73
SHOX2-201ENST00000389589 OR5I1Q13606 314 aa19.63■□□□□ 0.73
SHOX2-201ENST00000389589 LINC00479Q96M42 142 aa19.63■□□□□ 0.73
SHOX2-201ENST00000389589 CENPEQ02224 2701 aa19.62■□□□□ 0.73
SHOX2-201ENST00000389589 KMT2BQ9UMN6 2715 aaPredicted RBP19.62■□□□□ 0.73
SHOX2-201ENST00000389589 MAP1AP78559 2803 aaPredicted RBP19.62■□□□□ 0.73
SHOX2-201ENST00000389589 TRBV19A0A075B6N1 114 aa19.62■□□□□ 0.73
SHOX2-201ENST00000389589 FAM223BA6NKX1 122 aa19.62■□□□□ 0.73
SHOX2-201ENST00000389589 CLEC3BP05452 202 aa19.62■□□□□ 0.73
SHOX2-201ENST00000389589 UBE2G1P62253 170 aa19.62■□□□□ 0.73
SHOX2-201ENST00000389589 SNRPEP62304 92 aaKnown RBP19.62■□□□□ 0.73
SHOX2-201ENST00000389589 FAM223AQ8IWN6 122 aa19.62■□□□□ 0.73
SHOX2-201ENST00000389589 LYPD1Q8N2G4 141 aa19.62■□□□□ 0.73
SHOX2-201ENST00000389589 IL36BQ9NZH7 164 aa19.62■□□□□ 0.73
SHOX2-201ENST00000389589 RABAC1Q9UI14 185 aa19.62■□□□□ 0.73
SHOX2-201ENST00000389589 H3BTX0 84 aa19.61■□□□□ 0.73
SHOX2-201ENST00000389589 BMPR1BO00238 502 aa19.61■□□□□ 0.73
SHOX2-201ENST00000389589 ISLRO14498 428 aa19.61■□□□□ 0.73
SHOX2-201ENST00000389589 MRPS12O15235 138 aaKnown RBP19.61■□□□□ 0.73
SHOX2-201ENST00000389589 IGHV4-31P0DP07 118 aa19.61■□□□□ 0.73
SHOX2-201ENST00000389589 FAM3BP58499 235 aaPredicted RBP19.61■□□□□ 0.73
SHOX2-201ENST00000389589 ATP5G2Q06055 141 aa19.61■□□□□ 0.73
SHOX2-201ENST00000389589 PRSS57Q6UWY2 283 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms