RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 C9JAW5 83 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 PRSS57Q6UWY2 283 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 CHD5Q8TDI0 1954 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 IGKV1-12A0A0C4DH73 117 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 IGKV1D-12P01611 117 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 SEC11AP67812 179 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 STPG4Q8N801 248 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 GGTLC1Q9BX51 225 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 F2Z2F3 143 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 EREGO14944 169 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 RNF144BQ7Z419 303 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 PLSCR4Q9NRQ2 329 aa12.76□□□□□ -0.37
ALK-201ENST00000389048 DTX2Q86UW9 622 aa12.75□□□□□ -0.37
ALK-201ENST00000389048 SSC4DQ8WTU2 575 aa12.75□□□□□ -0.37
ALK-201ENST00000389048 F8WEM9 126 aa12.75□□□□□ -0.37
ALK-201ENST00000389048 COL4A1P02462 1669 aa12.75□□□□□ -0.37
ALK-201ENST00000389048 AMN1Q8IY45 258 aa12.75□□□□□ -0.37
ALK-201ENST00000389048 GAGE12BA1L429 117 aa12.75□□□□□ -0.37
ALK-201ENST00000389048 LINC00114Q6XXX2 140 aa12.75□□□□□ -0.37
ALK-201ENST00000389048 ZNRD1Q9P1U0 126 aa12.75□□□□□ -0.37
ALK-201ENST00000389048 A0A1B0GUS0 222 aa12.74□□□□□ -0.37
ALK-201ENST00000389048 C5orf63A6NC05 138 aa12.74□□□□□ -0.37
ALK-201ENST00000389048 OVOL1O14753 267 aa12.74□□□□□ -0.37
ALK-201ENST00000389048 LILRA1O75019 489 aa12.74□□□□□ -0.37
ALK-201ENST00000389048 PTPRZ1P23471 2315 aaPredicted RBP12.74□□□□□ -0.37
ALK-201ENST00000389048 PYY3Q5JQD4 70 aa12.74□□□□□ -0.37
ALK-201ENST00000389048 IGKV1-27A0A075B6S5 117 aa12.74□□□□□ -0.37
ALK-201ENST00000389048 LEPROTO15243 131 aa12.74□□□□□ -0.37
ALK-201ENST00000389048 RNASE6Q93091 150 aaKnown RBP12.74□□□□□ -0.37
ALK-201ENST00000389048 LINC00479Q96M42 142 aa12.74□□□□□ -0.37
ALK-201ENST00000389048 ANAPC10Q9UM13 185 aa12.74□□□□□ -0.37
ALK-201ENST00000389048 J3QW42 95 aa12.74□□□□□ -0.37
ALK-201ENST00000389048 C1orf194Q5T5A4 169 aa12.74□□□□□ -0.37
ALK-201ENST00000389048 TCF15Q12870 199 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 UBE2V1Q13404 147 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 ZNF664Q8N3J9 261 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 MAPK1IP1LQ8NDC0 245 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 C3orf79P0CE67 100 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 RALGAPA1Q6GYQ0 2036 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 GHRHP01286 108 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 DKK1O94907 266 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 FAM90A1Q86YD7 464 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 IGHV1-3A0A0C4DH29 117 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 C9orf153Q5TBE3 101 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 CD177Q8N6Q3 437 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 SRSF8Q9BRL6 282 aaKnown RBP12.73□□□□□ -0.37
ALK-201ENST00000389048 MSRB2Q9Y3D2 182 aa12.73□□□□□ -0.37
ALK-201ENST00000389048 PPBPP02775 128 aa12.72□□□□□ -0.37
ALK-201ENST00000389048 C8orf49Q96NF6 230 aa12.72□□□□□ -0.37
ALK-201ENST00000389048 AGMATQ9BSE5 352 aa12.72□□□□□ -0.37
ALK-201ENST00000389048 RS1O15537 224 aa12.72□□□□□ -0.37
ALK-201ENST00000389048 PRB2P02812 416 aaPredicted RBP12.72□□□□□ -0.37
ALK-201ENST00000389048 KLHL30-AS1Q8NEE0 82 aa12.72□□□□□ -0.37
ALK-201ENST00000389048 DLX4Q92988 240 aaPredicted RBP12.72□□□□□ -0.37
ALK-201ENST00000389048 H3BUX3 64 aa12.72□□□□□ -0.37
ALK-201ENST00000389048 ZNF672Q499Z4 452 aaPredicted RBP12.72□□□□□ -0.37
ALK-201ENST00000389048 PFN2P35080 140 aa12.71□□□□□ -0.37
ALK-201ENST00000389048 RASL10AQ92737 203 aa12.71□□□□□ -0.37
ALK-201ENST00000389048 SVILO95425 2214 aa12.71□□□□□ -0.37
ALK-201ENST00000389048 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.71□□□□□ -0.37
ALK-201ENST00000389048 TRAV12-1A0A0B4J245 112 aa12.71□□□□□ -0.37
ALK-201ENST00000389048 PSPNO60542 156 aa12.71□□□□□ -0.38
ALK-201ENST00000389048 LINC00271P0C7V0 271 aa12.71□□□□□ -0.38
ALK-201ENST00000389048 RPL36AP83881 106 aaKnown RBP12.71□□□□□ -0.38
ALK-201ENST00000389048 PRIMA1Q86XR5 153 aa12.71□□□□□ -0.38
ALK-201ENST00000389048 RPL36ALQ969Q0 106 aaKnown RBP12.71□□□□□ -0.38
ALK-201ENST00000389048 TMEM105Q8N8V8 129 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 TIMM21Q9BVV7 248 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 CSRP2Q16527 193 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 KLK9Q9UKQ9 250 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 IGHV3-38A0A0C4DH36 116 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 NTF4P34130 210 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 ID3Q02535 119 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 LINC01551Q86U37 167 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 CYTL1Q9NRR1 136 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 A0A096LPF7 62 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 TRAV26-2A0A0B4J265 109 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 TRAV25A0A0B4J276 109 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 CHAC1Q9BUX1 264 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 MRPL52Q86TS9 123 aaKnown RBP12.7□□□□□ -0.38
ALK-201ENST00000389048 WDR83OSQ9Y284 106 aa12.7□□□□□ -0.38
ALK-201ENST00000389048 IGHV1-8P0DP01 117 aa12.69□□□□□ -0.38
ALK-201ENST00000389048 RUSC1-AS1Q66K80 236 aa12.69□□□□□ -0.38
ALK-201ENST00000389048 FGF16O43320 207 aa12.69□□□□□ -0.38
ALK-201ENST00000389048 SYS1-DBNDD2H3BUS1 97 aa12.69□□□□□ -0.38
ALK-201ENST00000389048 PLEKHB2Q96CS7 222 aa12.69□□□□□ -0.38
ALK-201ENST00000389048 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
ALK-201ENST00000389048 ICE1Q9Y2F5 2266 aa12.68□□□□□ -0.38
ALK-201ENST00000389048 RP1L1Q8IWN7 2480 aaPredicted RBP12.68□□□□□ -0.38
ALK-201ENST00000389048 TMEM213A2RRL7 107 aa12.68□□□□□ -0.38
ALK-201ENST00000389048 ZC2HC1BQ5TFG8 222 aa12.68□□□□□ -0.38
ALK-201ENST00000389048 LINC00473A8K010 186 aa12.68□□□□□ -0.38
ALK-201ENST00000389048 LYPD2Q6UXB3 125 aa12.68□□□□□ -0.38
ALK-201ENST00000389048 CD5P06127 495 aa12.68□□□□□ -0.38
ALK-201ENST00000389048 MORN5Q5VZ52 161 aa12.68□□□□□ -0.38
ALK-201ENST00000389048 NEGR1Q7Z3B1 354 aa12.68□□□□□ -0.38
ALK-201ENST00000389048 KLHDC3Q9BQ90 382 aa12.68□□□□□ -0.38
ALK-201ENST00000389048 ZNF236Q9UL36 1845 aa12.68□□□□□ -0.38
ALK-201ENST00000389048 CLPSL2Q6UWE3 100 aa12.67□□□□□ -0.38
ALK-201ENST00000389048 NXPH4O95158 308 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms