RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 CACNA1EQ15878 2313 aa11.51□□□□□ -0.57
SNPH-201ENST00000381867 HTN3P15516 51 aa11.51□□□□□ -0.57
SNPH-201ENST00000381867 FAM166AQ6J272 317 aa11.51□□□□□ -0.57
SNPH-201ENST00000381867 DMRTC2Q8IXT2 367 aaPredicted RBP11.51□□□□□ -0.57
SNPH-201ENST00000381867 DUSP14O95147 198 aaKnown RBP11.51□□□□□ -0.57
SNPH-201ENST00000381867 LCN12Q6JVE5 192 aa11.51□□□□□ -0.57
SNPH-201ENST00000381867 DLX4Q92988 240 aaPredicted RBP11.51□□□□□ -0.57
SNPH-201ENST00000381867 CRYGSP22914 178 aa11.51□□□□□ -0.57
SNPH-201ENST00000381867 KLF17Q5JT82 389 aaPredicted RBP11.51□□□□□ -0.57
SNPH-201ENST00000381867 MORN3Q6PF18 240 aaPredicted RBP11.51□□□□□ -0.57
SNPH-201ENST00000381867 TMEM14EPQ6UXP3 125 aa11.51□□□□□ -0.57
SNPH-201ENST00000381867 COLCA1Q6ZS62 124 aa11.51□□□□□ -0.57
SNPH-201ENST00000381867 EFNA2O43921 213 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 MYOD1P15172 320 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 HGFACQ04756 655 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 TMEM167AQ8TBQ9 72 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 SYS1-DBNDD2H3BUS1 97 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 ETV2O00321 342 aaPredicted RBP11.5□□□□□ -0.57
SNPH-201ENST00000381867 IGHV3-11P01762 117 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 GBF1Q92538 1859 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 SCN2AQ99250 2005 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 HELZP42694 1942 aaKnown RBP11.5□□□□□ -0.57
SNPH-201ENST00000381867 MALP21145 153 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 VDAC2P45880 294 aaPredicted RBP11.5□□□□□ -0.57
SNPH-201ENST00000381867 IGF2-ASQ6U949 168 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 MGST2Q99735 147 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 NCR2O95944 276 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 PSG1P11464 419 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 KIR3DS1Q14943 382 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 C20orf204Q6ZNR8 217 aa11.5□□□□□ -0.57
SNPH-201ENST00000381867 TRGV11A0A075B6L2 103 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 IGHV1-18A0A0C4DH31 117 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 CD5LO43866 347 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 THBDP07204 575 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 ADCYAP1P18509 176 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 PEMTQ9UBM1 199 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 OVOL1O14753 267 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 LYL1P12980 280 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 B3GALT5-AS1P59052 145 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 PRSS33Q8NF86 280 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 PRSS22Q9GZN4 317 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 NPIPB5A8MRT5 1133 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 NUP35Q8NFH5 326 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 PLEKHB2Q96CS7 222 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 IGHV3-64A0A075B6Q5 118 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 TRAV8-1A0A0A6YYK1 113 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 EREGO14944 169 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 TFF1P04155 84 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 RHOGP84095 191 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 OR10W1Q8NGF6 305 aa11.49□□□□□ -0.57
SNPH-201ENST00000381867 PHLDA1Q8WV24 401 aaPredicted RBP11.48□□□□□ -0.57
SNPH-201ENST00000381867 GAGE12BA1L429 117 aa11.48□□□□□ -0.57
SNPH-201ENST00000381867 TCRAP04437 139 aa11.48□□□□□ -0.57
SNPH-201ENST00000381867 FAM90A2PQ658T7 463 aa11.48□□□□□ -0.57
SNPH-201ENST00000381867 TMEM86BQ8N661 226 aa11.48□□□□□ -0.57
SNPH-201ENST00000381867 IGKV1-5P01602 117 aa11.48□□□□□ -0.57
SNPH-201ENST00000381867 LYZL1Q6UWQ5 148 aa11.48□□□□□ -0.57
SNPH-201ENST00000381867 CACNA1IQ9P0X4 2223 aa11.48□□□□□ -0.57
SNPH-201ENST00000381867 OCIAD2Q56VL3 154 aa11.48□□□□□ -0.57
SNPH-201ENST00000381867 NABP1Q96AH0 204 aa11.48□□□□□ -0.57
SNPH-201ENST00000381867 SLC25A39Q9BZJ4 359 aaPredicted RBP11.48□□□□□ -0.57
SNPH-201ENST00000381867 LYNX1G3V0Z9 82 aa11.47□□□□□ -0.57
SNPH-201ENST00000381867 LGALS1P09382 135 aaKnown RBP11.47□□□□□ -0.57
SNPH-201ENST00000381867 LYNX1P0DP58 116 aa11.47□□□□□ -0.57
SNPH-201ENST00000381867 PRB3Q04118 309 aaPredicted RBP11.47□□□□□ -0.57
SNPH-201ENST00000381867 FOXL2NBQ6ZUU3 175 aa11.47□□□□□ -0.57
SNPH-201ENST00000381867 DTX1Q86Y01 620 aa11.47□□□□□ -0.57
SNPH-201ENST00000381867 MESP1Q9BRJ9 268 aa11.47□□□□□ -0.57
SNPH-201ENST00000381867 RFNGQ9Y644 331 aa11.47□□□□□ -0.57
SNPH-201ENST00000381867 COX11Q9Y6N1 276 aa11.47□□□□□ -0.57
SNPH-201ENST00000381867 SNRNP200O75643 2136 aaKnown RBP11.47□□□□□ -0.57
SNPH-201ENST00000381867 ZCCHC24Q8N2G6 241 aaKnown RBP11.47□□□□□ -0.57
SNPH-201ENST00000381867 IGKV2-40A0A087WW87 121 aaPredicted RBP11.47□□□□□ -0.57
SNPH-201ENST00000381867 IGKV2D-40P01614 121 aaPredicted RBP11.47□□□□□ -0.57
SNPH-201ENST00000381867 CRPP02741 224 aa11.47□□□□□ -0.57
SNPH-201ENST00000381867 TNFRSF14Q92956 283 aa11.47□□□□□ -0.57
SNPH-201ENST00000381867 KIAA1671Q9BY89 1806 aa11.47□□□□□ -0.57
SNPH-201ENST00000381867 A8MWP6 167 aa11.46□□□□□ -0.57
SNPH-201ENST00000381867 C2orf82Q6UX34 121 aa11.46□□□□□ -0.57
SNPH-201ENST00000381867 RALGAPA1Q6GYQ0 2036 aa11.46□□□□□ -0.57
SNPH-201ENST00000381867 FOXF2Q12947 444 aa11.46□□□□□ -0.57
SNPH-201ENST00000381867 PMS2P5A8MQ11 134 aa11.46□□□□□ -0.57
SNPH-201ENST00000381867 TNFRSF6BO95407 300 aa11.46□□□□□ -0.57
SNPH-201ENST00000381867 ZNF562Q6V9R5 426 aa11.46□□□□□ -0.57
SNPH-201ENST00000381867 A0A0U1RRA0 63 aa11.46□□□□□ -0.58
SNPH-201ENST00000381867 EXOC3-AS1Q8N2X6 119 aa11.46□□□□□ -0.58
SNPH-201ENST00000381867 C3orf36Q3SXR2 165 aa11.46□□□□□ -0.58
SNPH-201ENST00000381867 IGKV1-27A0A075B6S5 117 aa11.45□□□□□ -0.58
SNPH-201ENST00000381867 GNLYP22749 145 aa11.45□□□□□ -0.58
SNPH-201ENST00000381867 SIGLEC15Q6ZMC9 328 aa11.45□□□□□ -0.58
SNPH-201ENST00000381867 TRGV9Q99603 122 aa11.45□□□□□ -0.58
SNPH-201ENST00000381867 C20orf144Q9BQM9 153 aa11.45□□□□□ -0.58
SNPH-201ENST00000381867 SELENOKQ9Y6D0 94 aa11.45□□□□□ -0.58
SNPH-201ENST00000381867 GVINP1Q7Z2Y8 2422 aa11.45□□□□□ -0.58
SNPH-201ENST00000381867 C11orf44Q8N8P7 122 aa11.45□□□□□ -0.58
SNPH-201ENST00000381867 FGFBP3Q8TAT2 258 aa11.45□□□□□ -0.58
SNPH-201ENST00000381867 SCRT1Q9BWW7 348 aa11.45□□□□□ -0.58
SNPH-201ENST00000381867 RPUSD1Q9UJJ7 312 aaKnown RBP11.45□□□□□ -0.58
SNPH-201ENST00000381867 LINC00158P58513 81 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms