RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.19□□□□□ -0.62
SDC1-202ENST00000381150 NCR2O95944 276 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 ERHP84090 104 aaKnown RBP11.19□□□□□ -0.62
SDC1-202ENST00000381150 ZNF329Q86UD4 541 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 FAM169BQ8N8A8 192 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 AP5S1Q9NUS5 200 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 JPT1Q9UK76 154 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 IGLC1P0CG04 106 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 PRB3Q04118 309 aaPredicted RBP11.19□□□□□ -0.62
SDC1-202ENST00000381150 C5orf17Q8NAS9 161 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 OR2K2Q8NGT1 345 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 HARBI1Q96MB7 349 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 SPCS1Q9Y6A9 102 aa11.19□□□□□ -0.62
SDC1-202ENST00000381150 IGKV1D-17A0A075B6S4 117 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 TEX50A0A1B0GTY4 177 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 MEF2CQ06413 473 aaPredicted RBP11.18□□□□□ -0.62
SDC1-202ENST00000381150 GTSF1Q8WW33 167 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 MBD6Q96DN6 1003 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 SCRT2Q9NQ03 307 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 PRNDQ9UKY0 176 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 ABCA4P78363 2273 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 TM4SF5O14894 197 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 ENSAO43768 121 aaKnown RBP11.18□□□□□ -0.62
SDC1-202ENST00000381150 MTURNQ8N3F0 131 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 TMEM14BQ9NUH8 114 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 PROCRQ9UNN8 238 aa11.18□□□□□ -0.62
SDC1-202ENST00000381150 BSNQ9UPA5 3926 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 A0A0G2JLM5 398 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 GCSHP23434 173 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 SPRNQ5BIV9 151 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 OR4A5Q8NH83 315 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 SRSF12Q8WXF0 261 aaKnown RBP11.17□□□□□ -0.62
SDC1-202ENST00000381150 RABAC1Q9UI14 185 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 AKAP13Q12802 2813 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 TRGV8A0A0C4DH27 118 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 MGST3O14880 152 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 SAA1P0DJI8 122 aaPredicted RBP11.17□□□□□ -0.62
SDC1-202ENST00000381150 PAX2Q02962 417 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 KIR3DS1Q14943 382 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 TMEM186Q96B77 213 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 C18orf15Q96N68 181 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 EPDR1Q9UM22 224 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 FAM215AQ9Y5M1 114 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 IGHV3-72A0A0B4J1Y9 119 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 CD69Q07108 199 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 KLF5Q13887 457 aaPredicted RBP11.17□□□□□ -0.62
SDC1-202ENST00000381150 FAM120AOSQ5T036 256 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 FAM162BQ5T6X4 162 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 SAMD13Q5VXD3 122 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 ZNF474Q6S9Z5 364 aaPredicted RBP11.17□□□□□ -0.62
SDC1-202ENST00000381150 Q71RC1 249 aaPredicted RBP11.17□□□□□ -0.62
SDC1-202ENST00000381150 RPRMLQ8N4K4 120 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 JMJD8Q96S16 334 aa11.17□□□□□ -0.62
SDC1-202ENST00000381150 A6NDN8 102 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 ZADH2Q8N4Q0 377 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 FAM167A-AS1Q96KT0 104 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 GPR82Q96P67 336 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 FOXA2Q9Y261 457 aaPredicted RBP11.16□□□□□ -0.62
SDC1-202ENST00000381150 E7EUB6 86 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 CACNG7P62955 275 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 TCF15Q12870 199 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 FAM106AQ4KMX7 169 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 GOLT1AQ6ZVE7 132 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 ADTRPQ96IZ2 230 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 CCL13Q99616 98 aa11.16□□□□□ -0.62
SDC1-202ENST00000381150 MAP1AP78559 2803 aaPredicted RBP11.16□□□□□ -0.62
SDC1-202ENST00000381150 NBEAP1P0C6P0 100 aa11.15□□□□□ -0.62
SDC1-202ENST00000381150 FAM87AP0C7U9 286 aa11.15□□□□□ -0.62
SDC1-202ENST00000381150 Q6ZS92 163 aa11.15□□□□□ -0.62
SDC1-202ENST00000381150 K7EM74 188 aa11.15□□□□□ -0.62
SDC1-202ENST00000381150 LOXL3P58215 753 aa11.15□□□□□ -0.62
SDC1-202ENST00000381150 PRCDQ00LT1 54 aa11.15□□□□□ -0.62
SDC1-202ENST00000381150 WFDC12Q8WWY7 111 aa11.15□□□□□ -0.62
SDC1-202ENST00000381150 H1FXQ92522 213 aaKnown RBP11.15□□□□□ -0.62
SDC1-202ENST00000381150 ZNF257Q9Y2Q1 563 aa11.15□□□□□ -0.62
SDC1-202ENST00000381150 CSN1S1P47710 185 aa11.15□□□□□ -0.63
SDC1-202ENST00000381150 EXOC3-AS1Q8N2X6 119 aa11.15□□□□□ -0.63
SDC1-202ENST00000381150 OR1L4Q8NGR5 311 aa11.15□□□□□ -0.63
SDC1-202ENST00000381150 CIDEAO60543 219 aa11.14□□□□□ -0.63
SDC1-202ENST00000381150 RNASE2P10153 161 aaKnown RBP11.14□□□□□ -0.63
SDC1-202ENST00000381150 FCER1GP30273 86 aa11.14□□□□□ -0.63
SDC1-202ENST00000381150 CFHR2P36980 270 aa11.14□□□□□ -0.63
SDC1-202ENST00000381150 KIR2DS2P43631 304 aa11.14□□□□□ -0.63
SDC1-202ENST00000381150 PET117Q6UWS5 81 aa11.14□□□□□ -0.63
SDC1-202ENST00000381150 TTTY13Q9BZ97 58 aa11.14□□□□□ -0.63
SDC1-202ENST00000381150 SRRM5B3KS81 715 aa11.14□□□□□ -0.63
SDC1-202ENST00000381150 UPK2O00526 184 aa11.14□□□□□ -0.63
SDC1-202ENST00000381150 OR2J3O76001 311 aa11.14□□□□□ -0.63
SDC1-202ENST00000381150 PATE2Q6UY27 113 aa11.14□□□□□ -0.63
SDC1-202ENST00000381150 RBPMS2Q6ZRY4 209 aaKnown RBP11.14□□□□□ -0.63
SDC1-202ENST00000381150 WIPF2Q8TF74 440 aaPredicted RBP11.14□□□□□ -0.63
SDC1-202ENST00000381150 CHCHD1Q96BP2 118 aaKnown RBP11.14□□□□□ -0.63
SDC1-202ENST00000381150 JKAMPQ9P055 326 aa11.14□□□□□ -0.63
SDC1-202ENST00000381150 MRPL36Q9P0J6 103 aaKnown RBP11.14□□□□□ -0.63
SDC1-202ENST00000381150 A1L4Q6 167 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 ARMS2P0C7Q2 107 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 IFI27P40305 119 aaPredicted RBP11.13□□□□□ -0.63
SDC1-202ENST00000381150 LYZP61626 148 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms