RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 HIST1H2BOP23527 126 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 HIST1H2BBP33778 126 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 HIST1H2BDP58876 126 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 HIST1H2BCP62807 126 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 HIST2H2BEQ16778 126 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 CR1LQ2VPA4 569 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.71□□□□□ -1.01
NEDD9-201ENST00000379433 KIR3DL3Q8N743 410 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 OR8B3Q8NGG8 313 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 OCC1Q8TAD7 63 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 HIST1H2BHQ93079 126 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 OR8B2Q96RD0 313 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 MGST2Q99735 147 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 HIST1H2BNQ99877 126 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 HIST1H2BMQ99879 126 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 SMIM7Q9BQ49 75 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 FBXL15Q9H469 300 aa8.71□□□□□ -1.01
NEDD9-201ENST00000379433 C17orf112F2Z3M2 114 aa8.71□□□□□ -1.02
NEDD9-201ENST00000379433 FOXH1O75593 365 aa8.71□□□□□ -1.02
NEDD9-201ENST00000379433 C4orf48Q5BLP8 95 aa8.71□□□□□ -1.02
NEDD9-201ENST00000379433 C5orf17Q8NAS9 161 aa8.71□□□□□ -1.02
NEDD9-201ENST00000379433 MRAPQ8TCY5 172 aa8.71□□□□□ -1.02
NEDD9-201ENST00000379433 TIMD4Q96H15 378 aa8.71□□□□□ -1.02
NEDD9-201ENST00000379433 TMEM133Q9H2Q1 129 aa8.71□□□□□ -1.02
NEDD9-201ENST00000379433 KIR2DL5BA0A0G2JN68 375 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 KIR2DL5BA0A0G2JPC4 375 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 A1L4Q6 167 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 NTF3P20783 257 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 VDAC2P45880 294 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-201ENST00000379433 ATP5G3P48201 142 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 SERF2P84101 59 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 ASPHD1Q5U4P2 390 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 KIR2DL5AQ8N109 375 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 UHRF2Q96PU4 802 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 FNDC4Q9H6D8 234 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-201ENST00000379433 UPK2O00526 184 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 ARL14EPLP0DKL9 152 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 MEF2CQ06413 473 aaPredicted RBP8.7□□□□□ -1.02
NEDD9-201ENST00000379433 TMEM155Q4W5P6 130 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 ZNF841Q6ZN19 808 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 OR4C13Q8NGP0 309 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 NDFIP1Q9BT67 221 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 TUBA4BQ9H853 241 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 CHD6Q8TD26 2715 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 OR10J1P30954 320 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 KIR2DS2P43631 304 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 PSMB3P49720 205 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 TCTEX1D1Q8N7M0 179 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 STPG3Q8N7X2 389 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 ADTRPQ96IZ2 230 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 RCHY1Q96PM5 261 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 NABP2Q9BQ15 211 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 C19orf24Q9BVV8 132 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 BET1LQ9NYM9 111 aa8.7□□□□□ -1.02
NEDD9-201ENST00000379433 TMEM89A2RUT3 159 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 H3BTX0 84 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 TMEM241Q24JQ0 296 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 ACOT6Q3I5F7 207 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-201ENST00000379433 C10orf91Q5T1B1 145 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 TEPPQ6URK8 271 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 ANAPC13Q9BS18 74 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 TMEM14BQ9NUH8 114 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 PRNDQ9UKY0 176 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 LAMTOR2Q9Y2Q5 125 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 LOC102723971A0A1B0GUV8 181 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 NCBP2LA6PVI3 153 aaKnown RBP8.69□□□□□ -1.02
NEDD9-201ENST00000379433 FCN1O00602 326 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 MOSP00540 346 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 Q8WTZ3 238 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 C11orf94C9JXX5 98 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 KLF17Q5JT82 389 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-201ENST00000379433 PSMG3Q9BT73 122 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-201ENST00000379433 GGTLC1Q9BX51 225 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 NPVFQ9HCQ7 196 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 POLR3KQ9Y2Y1 108 aaPredicted RBP8.69□□□□□ -1.02
NEDD9-201ENST00000379433 WASHC3Q9Y3C0 194 aa8.69□□□□□ -1.02
NEDD9-201ENST00000379433 CTXND1A0A1B0GTU2 59 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 GPR6P46095 362 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-201ENST00000379433 CAMPP49913 170 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 ERHP84090 104 aaKnown RBP8.68□□□□□ -1.02
NEDD9-201ENST00000379433 MEF2BQ02080 365 aaPredicted RBP8.68□□□□□ -1.02
NEDD9-201ENST00000379433 WT1-ASQ06250 92 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 EFNB3Q15768 340 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 NPIPB3Q92617 1050 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 MRPL16Q9NX20 251 aaKnown RBP8.68□□□□□ -1.02
NEDD9-201ENST00000379433 ACANP16112 2415 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 NOTCH3Q9UM47 2321 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 TIMM23O14925 209 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 ORM2P19652 201 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 BAALCQ8WXS3 180 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 SGK494Q96LW2 274 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 TBX15Q96SF7 602 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 CLEC7AQ9BXN2 247 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 WDR83OSQ9Y284 106 aa8.68□□□□□ -1.02
NEDD9-201ENST00000379433 IGKV1OR2-108A0A075B7D4 117 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 SH2D7A6NKC9 451 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-201ENST00000379433 NDUFB4O95168 129 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 CRYGBP07316 175 aa8.67□□□□□ -1.02
NEDD9-201ENST00000379433 HINT1P49773 126 aaPredicted RBP8.67□□□□□ -1.02
NEDD9-201ENST00000379433 ZNF90Q03938 601 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms