RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CCL1P22362 96 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 C11orf44Q8N8P7 122 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 DAD1P61803 113 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 MUC21A0A0G2JKD1 596 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 MUC21A0A140T8X8 626 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 CD300EQ496F6 205 aaPredicted RBP9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 ATP5L2Q7Z4Y8 100 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 DTX4Q9Y2E6 619 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 IGHV3OR16-8A0A075B7F1 116 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 EVI2AP22794 236 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 PCP4P48539 62 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 MINOS1Q5TGZ0 78 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 MINOS1-NBL1R4GNA1 71 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 ZAR1Q86SH2 424 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 CHKB-CPT1BH3BT56 60 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 OR9G9P0C7N8 305 aa9.37□□□□□ -0.91
PTCHD1-201ENST00000379361 SAA2-SAA4A0A096LPE2 208 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 VCYO14598 125 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 SAA2P0DJI9 122 aaPredicted RBP9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 CXCL2P19875 107 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 CD300CQ08708 224 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 A0A1W2PPV9 198 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 C1orf100Q5SVJ3 147 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 DMRTA1Q5VZB9 504 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 FASNP49327 2511 aaKnown RBP9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 LDLRAD4O15165 306 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 FBLN7Q53RD9 439 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 PRDM13Q9H4Q3 707 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 GAGE13Q4V321 117 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 LTBP4Q8N2S1 1624 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 SLC25A16P16260 332 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 C2orf82Q6UX34 121 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 CLPSP04118 112 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 APCDD1LQ8NCL9 501 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 SIGMAR1Q99720 223 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 TIMM23O14925 209 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 MMP23AO75900 390 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 HLA-DQB1P01920 261 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 GFI1BQ5VTD9 330 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 MEGF9Q9H1U4 602 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 H3BUT2 72 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 ZNF708P17019 499 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 NPC2P61916 151 aa9.36□□□□□ -0.91
PTCHD1-201ENST00000379361 SIGLEC12Q96PQ1 595 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 TMEM144Q7Z5S9 345 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 PIP4P2Q8N4L2 257 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 TIMM21Q9BVV7 248 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 TNFRSF14Q92956 283 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 C1orf159Q96HA4 380 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 WDYHV1Q96HA8 205 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 E9PLN8 166 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 SUPT4H1P63272 117 aaKnown RBP9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 VMO1Q7Z5L0 202 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 FAM216BQ8N7L0 139 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 IGFBP6P24592 240 aaPredicted RBP9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 ASPHD2Q6ICH7 369 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 LHFPL4Q7Z7J7 247 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 SLC25A45Q8N413 288 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 GATA4P43694 442 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 TMEM256Q8N2U0 113 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 FOXL2P58012 376 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 MIR17HGQ75NE6 70 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 A8MXK9 166 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 IGHG3P01860 377 aa9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 SLC25A48Q6ZT89 311 aaKnown RBP9.35□□□□□ -0.91
PTCHD1-201ENST00000379361 RAI1Q7Z5J4 1906 aaPredicted RBP9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 FNDC4Q9H6D8 234 aaPredicted RBP9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 SAMD5Q5TGI4 173 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 SPANXDQ9BXN6 97 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 TMEM258P61165 79 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 SFTA2Q6UW10 78 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 IGHV1-2P23083 117 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 EPDR1Q9UM22 224 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 MRPS18CQ9Y3D5 142 aaKnown RBP9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 FAM90A9PA6NNJ1 464 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 SOCS3O14543 225 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 PILRAQ9UKJ1 303 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 C12orf77C9JDV5 145 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 MBNL3Q9NUK0 354 aaKnown RBP9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 TRBV5-7A0A0A0MS05 114 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 A0A0G2JK05 382 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 AMBPP02760 352 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 ALPK3Q96L96 1907 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 IGHV2-26A0A0B4J1V2 119 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 ST6GALNAC3Q8NDV1 305 aa9.34□□□□□ -0.91
PTCHD1-201ENST00000379361 ZNF625Q96I27 306 aaPredicted RBP9.34□□□□□ -0.92
PTCHD1-201ENST00000379361 TRBV25-1A0A075B6N4 114 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 PSPNO60542 156 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 ZNF479Q96JC4 524 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 USP9YO00507 2555 aaPredicted RBP9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 OOSP1A8MZH6 123 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 LRP4O75096 1905 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 NDUFS8O00217 210 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 DEFB130BP0DP73 79 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 DEFB130AP0DP74 79 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 TCTEX1D4Q5JR98 221 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 ZNF250P15622 560 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 A0A087WWC5 75 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 IGKV1-8A0A0C4DH67 115 aa9.33□□□□□ -0.92
PTCHD1-201ENST00000379361 NRXN2Q9P2S2 1712 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms