RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 NDUFA6P56556 154 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 PNRC1Q12796 327 aaPredicted RBP10.14□□□□□ -0.79
TRIM40-206ENST00000376724 BCL6BQ8N143 479 aaPredicted RBP10.14□□□□□ -0.79
TRIM40-206ENST00000376724 FAM110DQ8TAY7 271 aaPredicted RBP10.14□□□□□ -0.79
TRIM40-206ENST00000376724 YPEL4Q96NS1 127 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 TXNDC17Q9BRA2 123 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 C21orf62Q9NYP8 219 aa10.14□□□□□ -0.79
TRIM40-206ENST00000376724 NAV2Q8IVL1 2488 aa10.13□□□□□ -0.79
TRIM40-206ENST00000376724 OR2C1O95371 312 aa10.13□□□□□ -0.79
TRIM40-206ENST00000376724 AURKAIP1Q9NWT8 199 aaPredicted RBP10.13□□□□□ -0.79
TRIM40-206ENST00000376724 HIGD1AQ9Y241 93 aa10.13□□□□□ -0.79
TRIM40-206ENST00000376724 OR2T8A6NH00 312 aa10.12□□□□□ -0.79
TRIM40-206ENST00000376724 RPL23P62829 140 aaKnown RBP10.12□□□□□ -0.79
TRIM40-206ENST00000376724 SUMO1P63165 101 aaKnown RBP10.12□□□□□ -0.79
TRIM40-206ENST00000376724 OR10D4PQ8NGN7 298 aa10.12□□□□□ -0.79
TRIM40-206ENST00000376724 MS4A10Q96PG2 267 aa10.12□□□□□ -0.79
TRIM40-206ENST00000376724 A6NDX4 124 aa10.12□□□□□ -0.79
TRIM40-206ENST00000376724 F8W735 103 aaPredicted RBP10.12□□□□□ -0.79
TRIM40-206ENST00000376724 TSTD3H0UI37 97 aa10.12□□□□□ -0.79
TRIM40-206ENST00000376724 J3QLI3 93 aa10.12□□□□□ -0.79
TRIM40-206ENST00000376724 RPS10P46783 165 aaKnown RBP10.12□□□□□ -0.79
TRIM40-206ENST00000376724 PLP1P60201 277 aa10.12□□□□□ -0.79
TRIM40-206ENST00000376724 C15orf32Q32M92 178 aa10.12□□□□□ -0.79
TRIM40-206ENST00000376724 BLNKQ8WV28 456 aa10.12□□□□□ -0.79
TRIM40-206ENST00000376724 URGCP-MRPS24S4R325 110 aa10.12□□□□□ -0.79
TRIM40-206ENST00000376724 TRAV30A0A087WSZ9 112 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 PGPEP1LA6NFU8 196 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 B4DEV8 164 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 GGTLC3B5MD39 225 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 TCAPO15273 167 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 TOMM40O96008 361 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 IL4P05112 153 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 CRYBB3P26998 211 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 RHOGP84095 191 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 DEFB112Q30KQ8 113 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 APCP25054 2843 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 A0A087WWC5 75 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 TRAV41A0A0B4J266 112 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 HNF1AP20823 631 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 KRTAP1-3Q8IUG1 177 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 FXYD5Q96DB9 178 aa10.11□□□□□ -0.79
TRIM40-206ENST00000376724 SLC25A39Q9BZJ4 359 aaPredicted RBP10.11□□□□□ -0.79
TRIM40-206ENST00000376724 CR1P17927 2039 aa10.1□□□□□ -0.79
TRIM40-206ENST00000376724 H3BTX0 84 aa10.1□□□□□ -0.79
TRIM40-206ENST00000376724 BLCAPP62952 87 aa10.1□□□□□ -0.79
TRIM40-206ENST00000376724 ZNF343Q6P1L6 599 aa10.1□□□□□ -0.79
TRIM40-206ENST00000376724 ZNF491Q8N8L2 437 aa10.1□□□□□ -0.79
TRIM40-206ENST00000376724 MBD6Q96DN6 1003 aa10.1□□□□□ -0.79
TRIM40-206ENST00000376724 RNF125Q96EQ8 232 aa10.1□□□□□ -0.79
TRIM40-206ENST00000376724 PITPNC1Q9UKF7 332 aa10.1□□□□□ -0.79
TRIM40-206ENST00000376724 ARL2-SNX15V9GYD0 113 aa10.1□□□□□ -0.79
TRIM40-206ENST00000376724 IGHV3-35A0A0C4DH35 117 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 A0A1W2PRE2 83 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 IGHV4-59P01825 116 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 YPEL3P61236 119 aaPredicted RBP10.09□□□□□ -0.79
TRIM40-206ENST00000376724 RANP62826 216 aaKnown RBP10.09□□□□□ -0.79
TRIM40-206ENST00000376724 STXBP6Q8NFX7 210 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 Q8WTZ3 238 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 ZNF48Q96MX3 618 aaPredicted RBP10.09□□□□□ -0.79
TRIM40-206ENST00000376724 MRPL27Q9P0M9 148 aaKnown RBP10.09□□□□□ -0.79
TRIM40-206ENST00000376724 CSPG4Q6UVK1 2322 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 TRBV20OR9-2A0A075B6H5 130 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 CTSGP08311 255 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 GPR183P32249 361 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 PRSS57Q6UWY2 283 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 Q6ZS46 218 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 WFDC11Q8NEX6 87 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 NOL4LQ96MY1 436 aaPredicted RBP10.09□□□□□ -0.79
TRIM40-206ENST00000376724 CHRDL1Q9BU40 450 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 ELOVL1Q9BW60 279 aa10.09□□□□□ -0.79
TRIM40-206ENST00000376724 IGHV3OR16-8A0A075B7F1 116 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 TRBV9A0A0B4J1U6 114 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 CLEC3BP05452 202 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 NBEAP1P0C6P0 100 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 FCGR2BP31994 310 aaPredicted RBP10.08□□□□□ -0.8
TRIM40-206ENST00000376724 USF2Q15853 346 aaPredicted RBP10.08□□□□□ -0.8
TRIM40-206ENST00000376724 LINC01551Q86U37 167 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 HIST3H2BBQ8N257 126 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 NECAP1Q8NC96 275 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 VN1R17PQ8TDU5 208 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 C11orf52Q96A22 123 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 PRO1933Q9H354 126 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 GNB4Q9HAV0 340 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 ZANQ9Y493 2812 aa10.08□□□□□ -0.8
TRIM40-206ENST00000376724 WI2-2373I1.2A0A1W2PRP0 233 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 HELTA6NFD8 242 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 CLDN34H7C241 214 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 M0QZK8 103 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 PPP1R2P9O14990 202 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 SMAD7O15105 426 aaKnown RBP10.07□□□□□ -0.8
TRIM40-206ENST00000376724 SCGB2A1O75556 95 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 GP9P14770 177 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 CYB5R2Q6BCY4 276 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 CLEC19AQ6UXS0 136 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 CIARTQ8N365 385 aaPredicted RBP10.07□□□□□ -0.8
TRIM40-206ENST00000376724 OR5R1Q8NH85 324 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 ZNF502Q8TBZ5 544 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 TXN2Q99757 166 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 IGHG2P01859 326 aa10.07□□□□□ -0.8
TRIM40-206ENST00000376724 ADMP35318 185 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms