RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 AGRNO00468 2067 aa10.61□□□□□ -0.71
HDAC6-204ENST00000376643 S100A7AQ86SG5 101 aa10.61□□□□□ -0.71
HDAC6-204ENST00000376643 TOMM5Q8N4H5 51 aa10.61□□□□□ -0.71
HDAC6-204ENST00000376643 LRTM2Q8N967 370 aa10.61□□□□□ -0.71
HDAC6-204ENST00000376643 RPRMQ9NS64 109 aa10.61□□□□□ -0.71
HDAC6-204ENST00000376643 CELA1Q9UNI1 258 aa10.61□□□□□ -0.71
HDAC6-204ENST00000376643 IFNA21P01568 189 aa10.6□□□□□ -0.71
HDAC6-204ENST00000376643 HBE1P02100 147 aa10.6□□□□□ -0.71
HDAC6-204ENST00000376643 PAX9P55771 341 aa10.6□□□□□ -0.71
HDAC6-204ENST00000376643 PSG9Q00887 426 aa10.6□□□□□ -0.71
HDAC6-204ENST00000376643 TMED4Q7Z7H5 227 aa10.6□□□□□ -0.71
HDAC6-204ENST00000376643 OR4B1Q8NGF8 309 aa10.6□□□□□ -0.71
HDAC6-204ENST00000376643 MCFD2Q8NI22 146 aa10.6□□□□□ -0.71
HDAC6-204ENST00000376643 C7orf50Q9BRJ6 194 aaKnown RBP10.6□□□□□ -0.71
HDAC6-204ENST00000376643 PRR13Q9NZ81 148 aa10.6□□□□□ -0.71
HDAC6-204ENST00000376643 PAIP2BQ9ULR5 123 aaKnown RBP10.6□□□□□ -0.71
HDAC6-204ENST00000376643 RNF24Q9Y225 148 aa10.6□□□□□ -0.71
HDAC6-204ENST00000376643 PITX3O75364 302 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 VAMP1P23763 118 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 TNFSF8P32971 234 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 ZNF90Q03938 601 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 OXA1LQ15070 435 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 ZNF79Q15937 498 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 UBE2DNLQ8IWF7 75 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 THAP8Q8NA92 274 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 BPIFCQ8NFQ6 507 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 OR4D5Q8NGN0 318 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 OR1B1Q8NGR6 318 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 C16orf92Q96LL3 132 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 NIPSNAP3BQ9BS92 247 aa10.59□□□□□ -0.71
HDAC6-204ENST00000376643 SLIRPQ9GZT3 109 aaKnown RBP10.59□□□□□ -0.71
HDAC6-204ENST00000376643 IGKV1D-37A0A075B6S9 117 aa10.58□□□□□ -0.72
HDAC6-204ENST00000376643 IGHV3OR16-12A0A075B7B8 117 aa10.58□□□□□ -0.72
HDAC6-204ENST00000376643 SOCS3O14543 225 aa10.58□□□□□ -0.72
HDAC6-204ENST00000376643 IGKV3-20P01619 116 aa10.58□□□□□ -0.72
HDAC6-204ENST00000376643 S100A5P33763 92 aa10.58□□□□□ -0.72
HDAC6-204ENST00000376643 EMP1P54849 157 aa10.58□□□□□ -0.72
HDAC6-204ENST00000376643 B2MP61769 119 aa10.58□□□□□ -0.72
HDAC6-204ENST00000376643 SOHLH1Q5JUK2 328 aa10.58□□□□□ -0.72
HDAC6-204ENST00000376643 SOSTQ9BQB4 213 aa10.58□□□□□ -0.72
HDAC6-204ENST00000376643 TMEM147Q9BVK8 224 aa10.58□□□□□ -0.72
HDAC6-204ENST00000376643 WDR12Q9GZL7 423 aaKnown RBP10.58□□□□□ -0.72
HDAC6-204ENST00000376643 DOK5Q9P104 306 aa10.58□□□□□ -0.72
HDAC6-204ENST00000376643 FRAS1Q86XX4 4008 aa10.57□□□□□ -0.72
HDAC6-204ENST00000376643 SYNGR2O43760 224 aa10.57□□□□□ -0.72
HDAC6-204ENST00000376643 DUSP14O95147 198 aaKnown RBP10.57□□□□□ -0.72
HDAC6-204ENST00000376643 IAPPP10997 89 aa10.57□□□□□ -0.72
HDAC6-204ENST00000376643 UBE2MP61081 183 aaKnown RBP10.57□□□□□ -0.72
HDAC6-204ENST00000376643 OR2F1Q13607 317 aa10.57□□□□□ -0.72
HDAC6-204ENST00000376643 RRN3P1Q2M238 152 aa10.57□□□□□ -0.72
HDAC6-204ENST00000376643 PYDC2Q56P42 97 aa10.57□□□□□ -0.72
HDAC6-204ENST00000376643 ZNF767PQ75MW2 155 aa10.57□□□□□ -0.72
HDAC6-204ENST00000376643 TMEM208Q9BTX3 173 aa10.57□□□□□ -0.72
HDAC6-204ENST00000376643 MAGT1Q9H0U3 335 aa10.57□□□□□ -0.72
HDAC6-204ENST00000376643 DKK2Q9UBU2 259 aa10.57□□□□□ -0.72
HDAC6-204ENST00000376643 A0A0J9YX75 114 aa10.56□□□□□ -0.72
HDAC6-204ENST00000376643 H3BMQ9 156 aa10.56□□□□□ -0.72
HDAC6-204ENST00000376643 AKR1C1Q04828 323 aa10.56□□□□□ -0.72
HDAC6-204ENST00000376643 LGALS9BQ3B8N2 356 aa10.56□□□□□ -0.72
HDAC6-204ENST00000376643 GDF5OSQ5U4N7 250 aa10.56□□□□□ -0.72
HDAC6-204ENST00000376643 ZNF709Q8N972 641 aa10.56□□□□□ -0.72
HDAC6-204ENST00000376643 STRAPQ9Y3F4 350 aaKnown RBP10.56□□□□□ -0.72
HDAC6-204ENST00000376643 LOC102723971A0A1B0GUV8 181 aa10.55□□□□□ -0.72
HDAC6-204ENST00000376643 ZNF98A6NK75 572 aa10.55□□□□□ -0.72
HDAC6-204ENST00000376643 WRBO00258 174 aa10.55□□□□□ -0.72
HDAC6-204ENST00000376643 SFT2D2O95562 160 aa10.55□□□□□ -0.72
HDAC6-204ENST00000376643 FXYD7P58549 80 aa10.55□□□□□ -0.72
HDAC6-204ENST00000376643 RNF212Q495C1 297 aa10.55□□□□□ -0.72
HDAC6-204ENST00000376643 FAM222AQ5U5X8 452 aa10.55□□□□□ -0.72
HDAC6-204ENST00000376643 FAM78BQ5VT40 261 aa10.55□□□□□ -0.72
HDAC6-204ENST00000376643 TRIM63Q969Q1 353 aa10.55□□□□□ -0.72
HDAC6-204ENST00000376643 SLC25A22Q9H936 323 aa10.55□□□□□ -0.72
HDAC6-204ENST00000376643 RPL7P18124 248 aaKnown RBP10.54□□□□□ -0.72
HDAC6-204ENST00000376643 ORM2P19652 201 aa10.54□□□□□ -0.72
HDAC6-204ENST00000376643 FAM3BP58499 235 aaPredicted RBP10.54□□□□□ -0.72
HDAC6-204ENST00000376643 RAP2BP61225 183 aa10.54□□□□□ -0.72
HDAC6-204ENST00000376643 SELENOTP62341 195 aa10.54□□□□□ -0.72
HDAC6-204ENST00000376643 SPANXN5Q5MJ07 72 aa10.54□□□□□ -0.72
HDAC6-204ENST00000376643 IGF2BP2-AS1Q96M15 143 aa10.54□□□□□ -0.72
HDAC6-204ENST00000376643 RSG1Q9BU20 258 aa10.54□□□□□ -0.72
HDAC6-204ENST00000376643 SLC35B3Q9H1N7 401 aa10.54□□□□□ -0.72
HDAC6-204ENST00000376643 SLC25A32Q9H2D1 315 aa10.54□□□□□ -0.72
HDAC6-204ENST00000376643 A8MTW9 85 aa10.53□□□□□ -0.72
HDAC6-204ENST00000376643 INSP01308 110 aa10.53□□□□□ -0.72
HDAC6-204ENST00000376643 INPP1P49441 399 aa10.53□□□□□ -0.72
HDAC6-204ENST00000376643 DAD1P61803 113 aa10.53□□□□□ -0.72
HDAC6-204ENST00000376643 TMEM144Q7Z5S9 345 aa10.53□□□□□ -0.72
HDAC6-204ENST00000376643 C15orf53Q8NAA6 179 aa10.53□□□□□ -0.72
HDAC6-204ENST00000376643 YTHDF2Q9Y5A9 579 aaKnown RBP10.53□□□□□ -0.72
HDAC6-204ENST00000376643 IGKV1OR2-108A0A075B7D4 117 aa10.52□□□□□ -0.73
HDAC6-204ENST00000376643 NAP1L6A6NFF2 107 aa10.52□□□□□ -0.73
HDAC6-204ENST00000376643 PRSS29PA6NIE9 313 aa10.52□□□□□ -0.73
HDAC6-204ENST00000376643 LYRM9A8MSI8 78 aa10.52□□□□□ -0.73
HDAC6-204ENST00000376643 IL5P05113 134 aa10.52□□□□□ -0.73
HDAC6-204ENST00000376643 HOXB5P09067 269 aa10.52□□□□□ -0.73
HDAC6-204ENST00000376643 PPP1R1AQ13522 171 aa10.52□□□□□ -0.73
HDAC6-204ENST00000376643 SPANXN2Q5MJ10 180 aa10.52□□□□□ -0.73
HDAC6-204ENST00000376643 GSG1LQ6UXU4 331 aa10.52□□□□□ -0.73
HDAC6-204ENST00000376643 SMCO3A2RU48 225 aa10.51□□□□□ -0.73
HDAC6-204ENST00000376643 PRSS46E5RG02 174 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms