RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 C15orf32Q32M92 178 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 TMEM144Q7Z5S9 345 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 C8orf46Q8TAG6 207 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 CEACAM1P13688 526 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 GATA2P23769 480 aaPredicted RBP10.39□□□□□ -0.75
VPS13A-204ENST00000376634 LTBRP36941 435 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 THBDP07204 575 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 RTBDNQ9BSG5 229 aaPredicted RBP10.39□□□□□ -0.75
VPS13A-204ENST00000376634 TIAF1O95411 115 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 C3orf36Q3SXR2 165 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 CTHRC1Q96CG8 243 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 PRTN3P24158 256 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 TEX43Q6ZNM6 134 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 IMMP1LQ96LU5 166 aa10.39□□□□□ -0.75
VPS13A-204ENST00000376634 CELA3AP09093 270 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 RBMY1FQ15415 496 aaKnown RBP10.38□□□□□ -0.75
VPS13A-204ENST00000376634 FAM201AQ5SY85 155 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 C1QL2Q7Z5L3 287 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 SIGLEC12Q96PQ1 595 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 IGHV3-73A0A0B4J1V6 119 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 IFI27L1Q96BM0 104 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 REPIN1Q9BWE0 567 aaKnown RBP10.38□□□□□ -0.75
VPS13A-204ENST00000376634 HIST1H2BKO60814 126 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 HIST1H2BJP06899 126 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 HIST1H2BOP23527 126 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 HIST1H2BBP33778 126 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 HIST1H2BDP58876 126 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 HIST1H2BCP62807 126 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 HIST2H2BEQ16778 126 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.38□□□□□ -0.75
VPS13A-204ENST00000376634 SLC25A48Q6ZT89 311 aaKnown RBP10.38□□□□□ -0.75
VPS13A-204ENST00000376634 HIST1H2BHQ93079 126 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 HIST1H2BNQ99877 126 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 HIST1H2BMQ99879 126 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 TRGV1A0A0A0MS02 117 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 C1QCP02747 245 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 IGHV1-2P23083 117 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 PRB3Q04118 309 aaPredicted RBP10.38□□□□□ -0.75
VPS13A-204ENST00000376634 C18orf12Q96KH6 178 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 RCHY1Q96PM5 261 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 C4orf51C9J302 202 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 ZNF883P0CG24 379 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 GAGE2AQ6NT46 116 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 CITED1Q99966 193 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 CD33P20138 364 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 Q5BKY6 102 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 WFDC6Q9BQY6 131 aa10.38□□□□□ -0.75
VPS13A-204ENST00000376634 TRAV40A0A0B4J280 105 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 PIN1P1O15428 100 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 GTF3AQ92664 365 aaKnown RBP10.37□□□□□ -0.75
VPS13A-204ENST00000376634 ABHD17AQ96GS6 310 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 UPK2O00526 184 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 OSTCQ9NRP0 149 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 PSG7Q13046 419 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 PLEKHB2Q96CS7 222 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 SPSB2Q99619 263 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 FOXL1Q12952 345 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 MORN2Q502X0 79 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 CD300EQ496F6 205 aaPredicted RBP10.37□□□□□ -0.75
VPS13A-204ENST00000376634 LINC01590Q5TEZ4 76 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 ZNF525Q8N782 197 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 TSKUQ8WUA8 353 aa10.37□□□□□ -0.75
VPS13A-204ENST00000376634 TRBV7-1A0A0A6YYK4 115 aa10.36□□□□□ -0.75
VPS13A-204ENST00000376634 C2CD3Q4AC94 2353 aa10.36□□□□□ -0.75
VPS13A-204ENST00000376634 UBE2CO00762 179 aa10.36□□□□□ -0.75
VPS13A-204ENST00000376634 DSCR9P59020 149 aa10.36□□□□□ -0.75
VPS13A-204ENST00000376634 GTSF1LQ9H1H1 148 aa10.36□□□□□ -0.75
VPS13A-204ENST00000376634 GZMBP10144 247 aa10.36□□□□□ -0.75
VPS13A-204ENST00000376634 ZXDCQ2QGD7 858 aaPredicted RBP10.36□□□□□ -0.75
VPS13A-204ENST00000376634 OR10W1Q8NGF6 305 aa10.36□□□□□ -0.75
VPS13A-204ENST00000376634 RPL23P62829 140 aaKnown RBP10.36□□□□□ -0.75
VPS13A-204ENST00000376634 MRPL52Q86TS9 123 aaKnown RBP10.36□□□□□ -0.75
VPS13A-204ENST00000376634 HAPLN4Q86UW8 402 aa10.36□□□□□ -0.75
VPS13A-204ENST00000376634 SRRM4A7MD48 611 aaKnown RBP10.36□□□□□ -0.75
VPS13A-204ENST00000376634 RPL15P61313 204 aaKnown RBP10.36□□□□□ -0.75
VPS13A-204ENST00000376634 SPINK8P0C7L1 97 aa10.36□□□□□ -0.75
VPS13A-204ENST00000376634 CD24P25063 80 aa10.36□□□□□ -0.75
VPS13A-204ENST00000376634 TBX6O95947 436 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-204ENST00000376634 ZNF124Q15973 351 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 C1orf122Q6ZSJ8 110 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 RPL35AP18077 110 aaKnown RBP10.35□□□□□ -0.75
VPS13A-204ENST00000376634 CDKN1AP38936 164 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 EFNB3Q15768 340 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 CSRP2Q16527 193 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 PLPPR1Q8TBJ4 325 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 TRAV41A0A0B4J266 112 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 LOC105371267A0A1B0GV96 52 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 A6NNC1 897 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 IGKV2-40A0A087WW87 121 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-204ENST00000376634 IGKV2D-40P01614 121 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-204ENST00000376634 PYYP10082 97 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 CTSBP07858 339 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 A0A1W2PRE2 83 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 IGLV3-21P80748 117 aaPredicted RBP10.35□□□□□ -0.75
VPS13A-204ENST00000376634 MESP2Q0VG99 397 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 MBNL3Q9NUK0 354 aaKnown RBP10.35□□□□□ -0.75
VPS13A-204ENST00000376634 PSG8Q9UQ74 426 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 SMIM10L1P0DMW3 83 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 MAJINQ3KP22 176 aa10.35□□□□□ -0.75
VPS13A-204ENST00000376634 RASL10AQ92737 203 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms