RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 IGHV1-24A0A0C4DH33 117 aa11.32□□□□□ -0.6
CLCNKA-202ENST00000375692 IGHV1-69-2A0A0G2JMI3 117 aa11.32□□□□□ -0.6
CLCNKA-202ENST00000375692 FCN3O75636 299 aa11.32□□□□□ -0.6
CLCNKA-202ENST00000375692 PRB4P10163 310 aaPredicted RBP11.32□□□□□ -0.6
CLCNKA-202ENST00000375692 HBBP68871 147 aa11.32□□□□□ -0.6
CLCNKA-202ENST00000375692 MPV17L2Q567V2 206 aa11.32□□□□□ -0.6
CLCNKA-202ENST00000375692 CHRDL1Q9BU40 450 aa11.32□□□□□ -0.6
CLCNKA-202ENST00000375692 TMEM177Q53S58 311 aa11.32□□□□□ -0.6
CLCNKA-202ENST00000375692 Q71RC1 249 aaPredicted RBP11.32□□□□□ -0.6
CLCNKA-202ENST00000375692 GPR82Q96P67 336 aa11.32□□□□□ -0.6
CLCNKA-202ENST00000375692 RPP21Q9H633 154 aaKnown RBP11.32□□□□□ -0.6
CLCNKA-202ENST00000375692 SLC25A17O43808 307 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 NBEAP1P0C6P0 100 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 FBLN7Q53RD9 439 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 ATP5L2Q7Z4Y8 100 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 THAP8Q8NA92 274 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 TMEM167AQ8TBQ9 72 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 MLST8Q9BVC4 326 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 LINC00312Q9Y6C7 94 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 PKDREJQ9NTG1 2253 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 H0Y8G0 127 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 TNFSF4P23510 183 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 TMEM200BQ69YZ2 307 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 OR10X1Q8NGY0 326 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 GSX1Q9H4S2 264 aaPredicted RBP11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 KLF12Q9Y4X4 402 aa11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 TIMM8BQ9Y5J9 83 aaPredicted RBP11.31□□□□□ -0.6
CLCNKA-202ENST00000375692 A0A1W2PPI3 338 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 SYS1-DBNDD2H3BUS1 97 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 PRRG2O14669 202 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 IGLV2-23P01705 113 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 CEACAM8P31997 349 aaPredicted RBP11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 FAM27E3Q08E93 113 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 OR4C13Q8NGP0 309 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 TRAV8-1A0A0A6YYK1 113 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 IGHV3-72A0A0B4J1Y9 119 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 A0A0G2JNJ9 132 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 TOX4O94842 621 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 P01737 135 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 SUB1P53999 127 aaKnown RBP eCLIP11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 VAMP3Q15836 100 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 H1FXQ92522 213 aaKnown RBP11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 PRSS22Q9GZN4 317 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 PRORYQ9H606 182 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 Q9UFV3 132 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 ZNF835Q9Y2P0 537 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 WASHC3Q9Y3C0 194 aa11.3□□□□□ -0.6
CLCNKA-202ENST00000375692 A8MWL6 223 aa11.29□□□□□ -0.6
CLCNKA-202ENST00000375692 LEPROTL1O95214 131 aa11.29□□□□□ -0.6
CLCNKA-202ENST00000375692 NUDT3O95989 172 aa11.29□□□□□ -0.6
CLCNKA-202ENST00000375692 PERPQ96FX8 193 aa11.29□□□□□ -0.6
CLCNKA-202ENST00000375692 PMCHL2Q9BQD1 86 aa11.29□□□□□ -0.6
CLCNKA-202ENST00000375692 GAL3ST2Q9H3Q3 398 aa11.29□□□□□ -0.6
CLCNKA-202ENST00000375692 INS-IGF2F8WCM5 200 aa11.29□□□□□ -0.6
CLCNKA-202ENST00000375692 OR4C5Q8NGB2 326 aa11.29□□□□□ -0.6
CLCNKA-202ENST00000375692 TACC2O95359 2948 aa11.29□□□□□ -0.6
CLCNKA-202ENST00000375692 CACNA1BQ00975 2339 aa11.29□□□□□ -0.6
CLCNKA-202ENST00000375692 IGHV2-70DA0A0C4DH43 119 aa11.28□□□□□ -0.6
CLCNKA-202ENST00000375692 C19orf71A6NCJ1 209 aa11.28□□□□□ -0.6
CLCNKA-202ENST00000375692 ENSAO43768 121 aaKnown RBP11.28□□□□□ -0.6
CLCNKA-202ENST00000375692 TEX36Q5VZQ5 186 aa11.28□□□□□ -0.6
CLCNKA-202ENST00000375692 ASCL2Q99929 193 aa11.28□□□□□ -0.6
CLCNKA-202ENST00000375692 CRXO43186 299 aaPredicted RBP11.28□□□□□ -0.6
CLCNKA-202ENST00000375692 CSN3P07498 182 aa11.28□□□□□ -0.6
CLCNKA-202ENST00000375692 MRGPRG-AS1Q2M3A8 158 aa11.28□□□□□ -0.6
CLCNKA-202ENST00000375692 CIARTQ8N365 385 aaPredicted RBP11.28□□□□□ -0.6
CLCNKA-202ENST00000375692 C22orf15Q8WYQ4 148 aa11.28□□□□□ -0.6
CLCNKA-202ENST00000375692 Q9H3A6 140 aa11.28□□□□□ -0.6
CLCNKA-202ENST00000375692 LTAP01374 205 aa11.27□□□□□ -0.6
CLCNKA-202ENST00000375692 TCRAP04437 139 aa11.27□□□□□ -0.6
CLCNKA-202ENST00000375692 PRB3Q04118 309 aaPredicted RBP11.27□□□□□ -0.6
CLCNKA-202ENST00000375692 KLRB1Q12918 225 aa11.27□□□□□ -0.6
CLCNKA-202ENST00000375692 LYPD2Q6UXB3 125 aa11.27□□□□□ -0.6
CLCNKA-202ENST00000375692 DAZAP1Q96EP5 407 aaKnown RBP11.27□□□□□ -0.6
CLCNKA-202ENST00000375692 ZFYVE26Q68DK2 2539 aa11.27□□□□□ -0.6
CLCNKA-202ENST00000375692 K7EP13 123 aa11.27□□□□□ -0.61
CLCNKA-202ENST00000375692 RNF151Q2KHN1 245 aa11.27□□□□□ -0.61
CLCNKA-202ENST00000375692 TMEM30BQ3MIR4 351 aa11.27□□□□□ -0.61
CLCNKA-202ENST00000375692 RBPMS2Q6ZRY4 209 aaKnown RBP11.27□□□□□ -0.61
CLCNKA-202ENST00000375692 VSTM2AQ8TAG5 236 aa11.27□□□□□ -0.61
CLCNKA-202ENST00000375692 ST20Q9HBF5 79 aa11.27□□□□□ -0.61
CLCNKA-202ENST00000375692 LOC102724200A0A096LPH7 203 aaPredicted RBP11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 TAX1BP3O14907 124 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 GP9P14770 177 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 CD40P25942 277 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 DLX1P56177 255 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 C5orf17Q8NAS9 161 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 STXBP6Q8NFX7 210 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 CHCHD1Q96BP2 118 aaKnown RBP11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 RNF24Q9Y225 148 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 USP24Q9UPU5 2620 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 MUC21A0A0G2JKD1 596 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 MUC21A0A140T8X8 626 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 CBY3A6NI87 242 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 CHEK1O14757 476 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 CNTFRP26992 372 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 FOXE3Q13461 319 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 MUC21Q5SSG8 566 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 OR4A5Q8NH83 315 aa11.26□□□□□ -0.61
CLCNKA-202ENST00000375692 FMC1Q96HJ9 113 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms