RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 DGAT2L7PQ6IED9 249 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 SLC25A48Q6ZT89 311 aaKnown RBP13.73□□□□□ -0.21
VARS-215ENST00000375663 TMEM14BQ9NUH8 114 aa13.73□□□□□ -0.21
VARS-215ENST00000375663 H0YJW9 148 aa13.72□□□□□ -0.21
VARS-215ENST00000375663 CD24P25063 80 aa13.72□□□□□ -0.21
VARS-215ENST00000375663 TMEM200BQ69YZ2 307 aa13.72□□□□□ -0.21
VARS-215ENST00000375663 PVRIGQ6DKI7 326 aa13.72□□□□□ -0.21
VARS-215ENST00000375663 HBDP02042 147 aa13.72□□□□□ -0.21
VARS-215ENST00000375663 DLX6P56179 175 aa13.72□□□□□ -0.21
VARS-215ENST00000375663 PRSS8Q16651 343 aa13.72□□□□□ -0.21
VARS-215ENST00000375663 CENPVQ7Z7K6 275 aaPredicted RBP13.72□□□□□ -0.21
VARS-215ENST00000375663 ARFGEF3Q5TH69 2177 aa13.72□□□□□ -0.21
VARS-215ENST00000375663 IGHV3-66A0A0C4DH42 116 aa13.72□□□□□ -0.21
VARS-215ENST00000375663 PMS2P5A8MQ11 134 aa13.72□□□□□ -0.21
VARS-215ENST00000375663 KIR3DL3Q8N743 410 aa13.71□□□□□ -0.21
VARS-215ENST00000375663 C18orf32Q8TCD1 76 aa13.71□□□□□ -0.21
VARS-215ENST00000375663 FNDC4Q9H6D8 234 aaPredicted RBP13.71□□□□□ -0.21
VARS-215ENST00000375663 ZNRD1Q9P1U0 126 aa13.71□□□□□ -0.21
VARS-215ENST00000375663 AMMECR1LQ6DCA0 310 aa13.71□□□□□ -0.21
VARS-215ENST00000375663 TTC9CQ8N5M4 171 aa13.71□□□□□ -0.21
VARS-215ENST00000375663 GAFA1Q96PS6 74 aa13.71□□□□□ -0.21
VARS-215ENST00000375663 LYNX1G3V0Z9 82 aa13.71□□□□□ -0.22
VARS-215ENST00000375663 ATP5LO75964 103 aa13.71□□□□□ -0.22
VARS-215ENST00000375663 LYNX1P0DP58 116 aa13.71□□□□□ -0.22
VARS-215ENST00000375663 PF4V1P10720 104 aa13.71□□□□□ -0.22
VARS-215ENST00000375663 ZNF138P52744 262 aa13.71□□□□□ -0.22
VARS-215ENST00000375663 V9GYV3 84 aa13.71□□□□□ -0.22
VARS-215ENST00000375663 NBR2O15453 112 aa13.71□□□□□ -0.22
VARS-215ENST00000375663 ARPC1AQ92747 370 aa13.71□□□□□ -0.22
VARS-215ENST00000375663 RNASE6Q93091 150 aaKnown RBP13.7□□□□□ -0.22
VARS-215ENST00000375663 MS4A6AQ9H2W1 248 aa13.7□□□□□ -0.22
VARS-215ENST00000375663 ZGRF1Q86YA3 2104 aa13.7□□□□□ -0.22
VARS-215ENST00000375663 GGTLC3B5MD39 225 aa13.7□□□□□ -0.22
VARS-215ENST00000375663 SYS1-DBNDD2H3BUS1 97 aa13.7□□□□□ -0.22
VARS-215ENST00000375663 ITGB1BP1O14713 200 aa13.7□□□□□ -0.22
VARS-215ENST00000375663 DMRTC2Q8IXT2 367 aaPredicted RBP13.7□□□□□ -0.22
VARS-215ENST00000375663 TRGV9Q99603 122 aa13.7□□□□□ -0.22
VARS-215ENST00000375663 IGHG3P01860 377 aa13.7□□□□□ -0.22
VARS-215ENST00000375663 FABP5P3A8MUU1 101 aa13.69□□□□□ -0.22
VARS-215ENST00000375663 UBE2V1Q13404 147 aa13.69□□□□□ -0.22
VARS-215ENST00000375663 CCDC168Q8NDH2 2452 aa13.69□□□□□ -0.22
VARS-215ENST00000375663 NEUROG1Q92886 237 aa13.69□□□□□ -0.22
VARS-215ENST00000375663 IFI27L1Q96BM0 104 aa13.69□□□□□ -0.22
VARS-215ENST00000375663 C5orf30Q96GV9 206 aa13.69□□□□□ -0.22
VARS-215ENST00000375663 SLC25A39Q9BZJ4 359 aaPredicted RBP13.69□□□□□ -0.22
VARS-215ENST00000375663 M0R381 172 aa13.69□□□□□ -0.22
VARS-215ENST00000375663 PSMG4Q5JS54 123 aa13.69□□□□□ -0.22
VARS-215ENST00000375663 C2orf16Q68DN1 1984 aa13.69□□□□□ -0.22
VARS-215ENST00000375663 TNCP24821 2201 aa13.69□□□□□ -0.22
VARS-215ENST00000375663 WNT2P09544 360 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 ZNF329Q86UD4 541 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 ORAOV1Q8WV07 137 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 MCRIP2Q9BUT9 160 aaKnown RBP13.68□□□□□ -0.22
VARS-215ENST00000375663 TIMM23O14925 209 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 NPSP0C0P6 89 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 IGLC2P0DOY2 106 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 IGLC3P0DOY3 106 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 ABHD17AQ96GS6 310 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 C15orf65H3BRN8 121 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 ID1P41134 155 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 LEPP41159 167 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 UNQ6494/PRO21346Q6UXR6 183 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 C11orf52Q96A22 123 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 SEC11AP67812 179 aa13.68□□□□□ -0.22
VARS-215ENST00000375663 A0A087X0K7 114 aa13.67□□□□□ -0.22
VARS-215ENST00000375663 IGHV1-8P0DP01 117 aa13.67□□□□□ -0.22
VARS-215ENST00000375663 OR2K2Q8NGT1 345 aa13.67□□□□□ -0.22
VARS-215ENST00000375663 EEF1AKMT3Q96AZ1 226 aa13.67□□□□□ -0.22
VARS-215ENST00000375663 DOPEY1Q5JWR5 2465 aa13.67□□□□□ -0.22
VARS-215ENST00000375663 CHD3Q12873 2000 aaKnown RBP13.67□□□□□ -0.22
VARS-215ENST00000375663 H7C2G1 150 aa13.67□□□□□ -0.22
VARS-215ENST00000375663 ZNF134P52741 427 aa13.67□□□□□ -0.22
VARS-215ENST00000375663 OR4X2Q8NGF9 303 aa13.67□□□□□ -0.22
VARS-215ENST00000375663 SELENOKQ9Y6D0 94 aa13.67□□□□□ -0.22
VARS-215ENST00000375663 NPIPB5A8MRT5 1133 aa13.67□□□□□ -0.22
VARS-215ENST00000375663 RPL15P61313 204 aaKnown RBP13.67□□□□□ -0.22
VARS-215ENST00000375663 MRPS16Q9Y3D3 137 aaKnown RBP13.67□□□□□ -0.22
VARS-215ENST00000375663 PPIFP30405 207 aaKnown RBP13.66□□□□□ -0.22
VARS-215ENST00000375663 ATP5G2Q06055 141 aa13.66□□□□□ -0.22
VARS-215ENST00000375663 TNFRSF14Q92956 283 aa13.66□□□□□ -0.22
VARS-215ENST00000375663 JKAMPQ9P055 326 aa13.66□□□□□ -0.22
VARS-215ENST00000375663 C19orf67A6NJJ6 358 aa13.66□□□□□ -0.22
VARS-215ENST00000375663 TMEM178BH3BS89 294 aa13.66□□□□□ -0.22
VARS-215ENST00000375663 SLAQ13239 276 aa13.66□□□□□ -0.22
VARS-215ENST00000375663 KRTAP27-1Q3LI81 207 aa13.66□□□□□ -0.22
VARS-215ENST00000375663 ZNF474Q6S9Z5 364 aaPredicted RBP13.66□□□□□ -0.22
VARS-215ENST00000375663 NCOR2Q9Y618 2525 aa13.66□□□□□ -0.22
VARS-215ENST00000375663 D6R8Y8 96 aa13.66□□□□□ -0.22
VARS-215ENST00000375663 SRSF6Q13247 344 aaKnown RBP13.66□□□□□ -0.22
VARS-215ENST00000375663 HTTP42858 3142 aa13.65□□□□□ -0.22
VARS-215ENST00000375663 IGHV2-26A0A0B4J1V2 119 aa13.65□□□□□ -0.22
VARS-215ENST00000375663 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.65□□□□□ -0.22
VARS-215ENST00000375663 NAA38Q9BRA0 125 aaKnown RBP13.65□□□□□ -0.22
VARS-215ENST00000375663 NHP2Q9NX24 153 aaKnown RBP13.65□□□□□ -0.22
VARS-215ENST00000375663 A0A1B0GWJ7 208 aa13.65□□□□□ -0.22
VARS-215ENST00000375663 MBD3L4A6NDZ8 208 aaPredicted RBP13.65□□□□□ -0.22
VARS-215ENST00000375663 MBD3L3A6NE82 208 aaPredicted RBP13.65□□□□□ -0.22
VARS-215ENST00000375663 MBD3L5A6NJ08 208 aaPredicted RBP13.65□□□□□ -0.22
VARS-215ENST00000375663 SH2D7A6NKC9 451 aaPredicted RBP13.65□□□□□ -0.22
VARS-215ENST00000375663 TMEM249Q2WGJ8 235 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms