RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 TSPOP30536 169 aa14.54□□□□□ -0.08
PTPDC1-202ENST00000375360 TEX36Q5VZQ5 186 aa14.54□□□□□ -0.08
PTPDC1-202ENST00000375360 LYPD6Q86Y78 171 aa14.54□□□□□ -0.08
PTPDC1-202ENST00000375360 TRBV20OR9-2A0A075B6H5 130 aa14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 RNF5Q99942 180 aa14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 SSBP4Q9BWG4 385 aaPredicted RBP14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 OTORQ9NRC9 128 aa14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 A0A1B0GUT8 65 aa14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 TMEM136Q6ZRR5 245 aa14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 SLC25A39Q9BZJ4 359 aaPredicted RBP14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 MSMBP08118 114 aa14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 Q1RN00 199 aa14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 Q8NFD4 153 aa14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 LYL1P12980 280 aa14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 C1QL4Q86Z23 238 aa14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 RPP21Q9H633 154 aaKnown RBP14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 PSG8Q9UQ74 426 aa14.53□□□□□ -0.08
PTPDC1-202ENST00000375360 SORL1Q92673 2214 aa14.52□□□□□ -0.08
PTPDC1-202ENST00000375360 TRAV8-1A0A0A6YYK1 113 aa14.52□□□□□ -0.08
PTPDC1-202ENST00000375360 C22orf46C9J442 243 aa14.52□□□□□ -0.08
PTPDC1-202ENST00000375360 CDX1P47902 265 aaPredicted RBP14.52□□□□□ -0.08
PTPDC1-202ENST00000375360 Q8NA96 180 aa14.52□□□□□ -0.08
PTPDC1-202ENST00000375360 NPIPB5A8MRT5 1133 aa14.52□□□□□ -0.09
PTPDC1-202ENST00000375360 ITGB1BP1O14713 200 aa14.52□□□□□ -0.09
PTPDC1-202ENST00000375360 FBLN7Q53RD9 439 aa14.52□□□□□ -0.09
PTPDC1-202ENST00000375360 REG4Q9BYZ8 158 aa14.52□□□□□ -0.09
PTPDC1-202ENST00000375360 SRRM4A7MD48 611 aaKnown RBP14.52□□□□□ -0.09
PTPDC1-202ENST00000375360 ZNF56Q15929 161 aa14.52□□□□□ -0.09
PTPDC1-202ENST00000375360 G3V318 75 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 RNASE4P34096 147 aaKnown RBP14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 NMUP48645 174 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 OR5AN1Q8NGI8 311 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 FMC1Q96HJ9 113 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 EPG5Q9HCE0 2579 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 MSMPQ1L6U9 139 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 FAM71F2Q6NXP2 309 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 SYT8Q8NBV8 401 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 CEP192Q8TEP8 1941 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 ZNF502Q8TBZ5 544 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 MAP1LC3AQ9H492 121 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 M0R3E3 92 aa14.51□□□□□ -0.09
PTPDC1-202ENST00000375360 TEX38Q6PEX7 206 aa14.5□□□□□ -0.09
PTPDC1-202ENST00000375360 C9JQL5 133 aa14.5□□□□□ -0.09
PTPDC1-202ENST00000375360 TMEM14BQ9NUH8 114 aa14.5□□□□□ -0.09
PTPDC1-202ENST00000375360 NUDT3O95989 172 aa14.5□□□□□ -0.09
PTPDC1-202ENST00000375360 FAM19A2Q8N3H0 131 aa14.5□□□□□ -0.09
PTPDC1-202ENST00000375360 LINC00479Q96M42 142 aa14.5□□□□□ -0.09
PTPDC1-202ENST00000375360 ZNF462Q96JM2 2506 aa14.5□□□□□ -0.09
PTPDC1-202ENST00000375360 BEND2Q8NDZ0 799 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 KCNS1Q96KK3 526 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 A0A087WWC5 75 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 TRAV1-1A0A0B4J248 108 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 IFITM10A6NMD0 228 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 GZMBP10144 247 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 CIARTQ8N365 385 aaPredicted RBP14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 C18orf15Q96N68 181 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 ASCL2Q99929 193 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 BEX4Q9NWD9 120 aaPredicted RBP14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 IGKV2-40A0A087WW87 121 aaPredicted RBP14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 IGKV2D-40P01614 121 aaPredicted RBP14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 UBE2E1P51965 193 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 ZNF562Q6V9R5 426 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 AP5S1Q9NUS5 200 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 PSMB11A5LHX3 300 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 FABP5P3A8MUU1 101 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 C10orf142B7Z368 130 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 Q5PR19 223 aa14.49□□□□□ -0.09
PTPDC1-202ENST00000375360 TMEM97Q5BJF2 176 aa14.48□□□□□ -0.09
PTPDC1-202ENST00000375360 TRGV9Q99603 122 aa14.48□□□□□ -0.09
PTPDC1-202ENST00000375360 TBL2Q9Y4P3 447 aaKnown RBP14.48□□□□□ -0.09
PTPDC1-202ENST00000375360 WT1-ASQ06250 92 aa14.48□□□□□ -0.09
PTPDC1-202ENST00000375360 SLC25A16P16260 332 aa14.48□□□□□ -0.09
PTPDC1-202ENST00000375360 FER1L6-AS1Q8NA97 138 aa14.48□□□□□ -0.09
PTPDC1-202ENST00000375360 ADORA2A-AS1P86434 159 aa14.47□□□□□ -0.09
PTPDC1-202ENST00000375360 ALPK3Q96L96 1907 aa14.47□□□□□ -0.09
PTPDC1-202ENST00000375360 OR4C46A6NHA9 309 aa14.47□□□□□ -0.09
PTPDC1-202ENST00000375360 ATP6V0E1O15342 81 aa14.47□□□□□ -0.09
PTPDC1-202ENST00000375360 LDLRAD2Q5SZI1 272 aa14.47□□□□□ -0.09
PTPDC1-202ENST00000375360 LINC01356Q8N9X3 169 aa14.47□□□□□ -0.09
PTPDC1-202ENST00000375360 EMP1P54849 157 aa14.47□□□□□ -0.09
PTPDC1-202ENST00000375360 KRTAP27-1Q3LI81 207 aa14.47□□□□□ -0.09
PTPDC1-202ENST00000375360 SPSB3Q6PJ21 355 aa14.47□□□□□ -0.09
PTPDC1-202ENST00000375360 ZNF833PQ6ZTB9 187 aa14.47□□□□□ -0.09
PTPDC1-202ENST00000375360 NDUFA4L2Q9NRX3 87 aa14.47□□□□□ -0.09
PTPDC1-202ENST00000375360 ZNF688P0C7X2 276 aa14.46□□□□□ -0.09
PTPDC1-202ENST00000375360 NSUN5P1Q3KNT7 163 aa14.46□□□□□ -0.09
PTPDC1-202ENST00000375360 LINC01551Q86U37 167 aa14.46□□□□□ -0.09
PTPDC1-202ENST00000375360 NRGNQ92686 78 aa14.46□□□□□ -0.09
PTPDC1-202ENST00000375360 SLC50A1Q9BRV3 221 aa14.46□□□□□ -0.09
PTPDC1-202ENST00000375360 SCGB1C2P0DMR2 95 aa14.46□□□□□ -0.09
PTPDC1-202ENST00000375360 ASIPP42127 132 aa14.46□□□□□ -0.09
PTPDC1-202ENST00000375360 TDGF1P3P51864 188 aa14.46□□□□□ -0.09
PTPDC1-202ENST00000375360 Q8TAT8 98 aa14.46□□□□□ -0.09
PTPDC1-202ENST00000375360 CDC42EP3Q9UKI2 254 aa14.46□□□□□ -0.09
PTPDC1-202ENST00000375360 MST1LQ2TV78 715 aa14.46□□□□□ -0.1
PTPDC1-202ENST00000375360 PRELID3AQ96N28 172 aa14.46□□□□□ -0.1
PTPDC1-202ENST00000375360 IGHV2-70DA0A0C4DH43 119 aa14.45□□□□□ -0.1
PTPDC1-202ENST00000375360 SRSF9Q13242 221 aaKnown RBP eCLIP14.45□□□□□ -0.1
PTPDC1-202ENST00000375360 CXCL1P09341 107 aa14.45□□□□□ -0.1
PTPDC1-202ENST00000375360 TRBV9A0A0B4J1U6 114 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms