RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 IGFBP2P18065 325 aa9.86□□□□□ -0.83
C9orf3-203ENST00000375315 C5orf64Q2M2E5 130 aa9.86□□□□□ -0.83
C9orf3-203ENST00000375315 ZCCHC24Q8N2G6 241 aaKnown RBP9.86□□□□□ -0.83
C9orf3-203ENST00000375315 TEX50A0A1B0GTY4 177 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 OR2H2O95918 312 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 SMIM13P0DJ93 91 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 VDAC2P45880 294 aaPredicted RBP9.85□□□□□ -0.83
C9orf3-203ENST00000375315 PRR20EP86478 221 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 PRR20CP86479 221 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 PRR20DP86480 221 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 PRR20BP86481 221 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 PRR20AP86496 221 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 ABHD12Q8N2K0 398 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 KLF14Q8TD94 323 aaPredicted RBP9.85□□□□□ -0.83
C9orf3-203ENST00000375315 NABP2Q9BQ15 211 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 SOX21Q9Y651 276 aaPredicted RBP9.85□□□□□ -0.83
C9orf3-203ENST00000375315 IGHV1-18A0A0C4DH31 117 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 C1orf159Q96HA4 380 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 PKIBQ9C010 78 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 FBLL1A6NHQ2 334 aaKnown RBP9.85□□□□□ -0.83
C9orf3-203ENST00000375315 FAM90A9PA6NNJ1 464 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 SMAD7O15105 426 aaKnown RBP9.85□□□□□ -0.83
C9orf3-203ENST00000375315 CEBPDP49716 269 aaPredicted RBP9.85□□□□□ -0.83
C9orf3-203ENST00000375315 BOD1L2Q8IYS8 172 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 VGLL1Q99990 258 aa9.85□□□□□ -0.83
C9orf3-203ENST00000375315 COL8A2P25067 703 aa9.84□□□□□ -0.83
C9orf3-203ENST00000375315 NRN1LQ496H8 165 aa9.84□□□□□ -0.83
C9orf3-203ENST00000375315 ASPHD1Q5U4P2 390 aa9.84□□□□□ -0.83
C9orf3-203ENST00000375315 CFAP46Q8IYW2 2715 aa9.84□□□□□ -0.83
C9orf3-203ENST00000375315 Q6ZR03 302 aa9.84□□□□□ -0.83
C9orf3-203ENST00000375315 MRPL16Q9NX20 251 aaKnown RBP9.84□□□□□ -0.83
C9orf3-203ENST00000375315 J3QT63 122 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 CCL21O00585 134 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 IGHV3-7P01780 117 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 ERVK-16P61578 105 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 PRR7Q8TB68 274 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 ZNF503Q96F45 646 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 NDFIP1Q9BT67 221 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 SPANXB1Q9NS25 103 aaPredicted RBP9.83□□□□□ -0.84
C9orf3-203ENST00000375315 MPC1Q9Y5U8 109 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 IGSF10Q6WRI0 2623 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 LINC00473A8K010 186 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 F8W1H4 67 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 WNT9BO14905 357 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 SPRY3O43610 288 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 GRNP28799 593 aaKnown RBP9.83□□□□□ -0.84
C9orf3-203ENST00000375315 CSN1S1P47710 185 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 GPR12P47775 334 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 C19orf24Q9BVV8 132 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 AMMECR1Q9Y4X0 333 aaPredicted RBP9.83□□□□□ -0.84
C9orf3-203ENST00000375315 CENPEQ02224 2701 aa9.83□□□□□ -0.84
C9orf3-203ENST00000375315 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.82□□□□□ -0.84
C9orf3-203ENST00000375315 CHEK1O14757 476 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 PRR31Q5SQ13 230 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 LINC00479Q96M42 142 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 TMUB1Q9BVT8 246 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 TMEM30CPA0ZSE6 113 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 CD24P25063 80 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 UCNP55089 124 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 MSMPQ1L6U9 139 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 LINC01560Q8TB33 94 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 ZNF747Q9BV97 191 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 A8MWL6 223 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 VWC2LB2RUY7 222 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 C8orf88P0DMB2 117 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 FCGR2BP31994 310 aaPredicted RBP9.82□□□□□ -0.84
C9orf3-203ENST00000375315 Q8IYB0 196 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 SSUH2Q9Y2M2 353 aa9.82□□□□□ -0.84
C9orf3-203ENST00000375315 C12orf77C9JDV5 145 aa9.81□□□□□ -0.84
C9orf3-203ENST00000375315 DUTP33316 252 aaKnown RBP9.81□□□□□ -0.84
C9orf3-203ENST00000375315 ZNF138P52744 262 aa9.81□□□□□ -0.84
C9orf3-203ENST00000375315 FAM201AQ5SY85 155 aa9.81□□□□□ -0.84
C9orf3-203ENST00000375315 NEU4Q8WWR8 484 aaPredicted RBP9.81□□□□□ -0.84
C9orf3-203ENST00000375315 RND1Q92730 232 aa9.81□□□□□ -0.84
C9orf3-203ENST00000375315 ENY2Q9NPA8 101 aa9.81□□□□□ -0.84
C9orf3-203ENST00000375315 AP5S1Q9NUS5 200 aa9.81□□□□□ -0.84
C9orf3-203ENST00000375315 TCF19Q9Y242 345 aa9.81□□□□□ -0.84
C9orf3-203ENST00000375315 SLC25A15Q9Y619 301 aa9.81□□□□□ -0.84
C9orf3-203ENST00000375315 FCGR3BO75015 233 aa9.81□□□□□ -0.84
C9orf3-203ENST00000375315 UBE2L3P68036 154 aaKnown RBP9.81□□□□□ -0.84
C9orf3-203ENST00000375315 USP24Q9UPU5 2620 aa9.81□□□□□ -0.84
C9orf3-203ENST00000375315 OOEPA6NGQ2 149 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 FNDC10F2Z333 226 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 PEX7O00628 323 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 IGKV3-15P01624 115 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 CSN3P07498 182 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 LINC00205P59089 165 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 SPRNQ5BIV9 151 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 WDR86Q86TI4 376 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 DEFB108BQ8NET1 73 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 SPAG8Q99932 426 aaPredicted RBP9.8□□□□□ -0.84
C9orf3-203ENST00000375315 SIGLEC8Q9NYZ4 499 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 FLNCQ14315 2725 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 OR11H12B2RN74 326 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 ZNF137PP52743 207 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 CDSNQ15517 529 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 TMEM116Q8NCL8 245 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 OR11H1Q8NG94 326 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 OR11H2Q8NH07 326 aa9.8□□□□□ -0.84
C9orf3-203ENST00000375315 RPP21Q9H633 154 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms