RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 RYR2Q92736 4967 aa8.42□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ELOA3CA0A087WX78 387 aaPredicted RBP8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PSMB11A5LHX3 300 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 OR2T8A6NH00 312 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 COX7A2P2O60397 106 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 TOMM40O96008 361 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 CLEC3BP05452 202 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 CTSGP08311 255 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PSG1P11464 419 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 CDC34P49427 236 aaPredicted RBP8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 DEFA5Q01523 94 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 TEX38Q6PEX7 206 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 SPSB3Q6PJ21 355 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 LCN15Q6UWW0 184 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 IL34Q6ZMJ4 242 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 C18orf65Q6ZTR6 163 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ZNF329Q86UD4 541 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 GATAD1Q8WUU5 269 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 GPR61Q9BZJ8 451 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 KLK15Q9H2R5 256 aa8.41□□□□□ -1.06
HLA-DQA1-202ENST00000374949 RAB19A4D1S5 217 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 MAP1LC3B2A6NCE7 125 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 NUPL2O15504 423 aaKnown RBP8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 HYPMO75409 117 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ELANEP08246 267 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 ORM2P19652 201 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PSMB8P28062 276 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PLP1P60201 277 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 CCL20P78556 96 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 FOXE3Q13461 319 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 FAM78BQ5VT40 261 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 C10orf113Q5VZT2 155 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 CLEC19AQ6UXS0 136 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 PATE2Q6UY27 113 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 C8orf86Q6ZUL3 223 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 SSX7Q7RTT5 188 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 OR51G1Q8NGK1 321 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 TMEM37Q8WXS4 190 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 MAP1LC3BQ9GZQ8 125 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 SLC25A22Q9H936 323 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 FUT9Q9Y231 359 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 U3KQK5 164 aa8.4□□□□□ -1.06
HLA-DQA1-202ENST00000374949 A0A1B0GV50 99 aa8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 TGOLN2O43493 480 aa8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 OR5G3P0C626 314 aa8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 GPR183P32249 361 aa8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 FAM209BQ5JX69 171 aa8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 EIF4E3Q8N5X7 224 aaKnown RBP8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 OR1B1Q8NGR6 318 aa8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 CCDC140Q96MF4 163 aa8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 DUX3Q96PT4 197 aa8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 CHRDL1Q9BU40 450 aa8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 MRPL32Q9BYC8 188 aaKnown RBP8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 SEPSECSQ9HD40 501 aaKnown RBP8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 TECRQ9NZ01 308 aaKnown RBP8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 DOK5Q9P104 306 aa8.39□□□□□ -1.07
HLA-DQA1-202ENST00000374949 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 HMGB3O15347 200 aaKnown RBP8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 OR2C1O95371 312 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 CXorf1O96002 111 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 STAG3L2P0CL84 134 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 STAG3L3P0CL85 134 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 ADMP35318 185 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 FGF8P55075 233 aaPredicted RBP8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 TAS2R45P59539 299 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 LYZP61626 148 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 PMS2P11Q13670 270 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 KIAA0141Q14154 515 aaPredicted RBP8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 SPATA31B1PQ5VZV4 182 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 ZNF343Q6P1L6 599 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 ZNF600Q6ZNG1 722 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 LCNL1Q6ZST4 164 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 S100A7AQ86SG5 101 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 ZNF491Q8N8L2 437 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 KLHL30-AS1Q8NEE0 82 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 CITED4Q96RK1 184 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 PBDC1Q9BVG4 233 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 GNB4Q9HAV0 340 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 MRPL27Q9P0M9 148 aaKnown RBP8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 HIGD1AQ9Y241 93 aa8.38□□□□□ -1.07
HLA-DQA1-202ENST00000374949 RBFOX3A6NFN3 312 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 EIF3GO75821 320 aaKnown RBP eCLIP8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 IGHV3-11P01762 117 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 IL4P05112 153 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 RPLP1P05386 114 aaKnown RBP8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 C8orf88P0DMB2 117 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 S100A7P31151 101 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 ARL3P36405 182 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 PPT1P50897 306 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 RELQ04864 619 aaPredicted RBP8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 PEA15Q15121 130 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 GUK1Q16774 197 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 UQCC3Q6UW78 93 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 MIR17HGQ75NE6 70 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 LINC00305Q7Z4B0 112 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 RNF152Q8N8N0 203 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 RNF125Q96EQ8 232 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 FAM210AQ96ND0 272 aa8.37□□□□□ -1.07
HLA-DQA1-202ENST00000374949 PRR25Q96S07 402 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms