RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 GREM1O60565 184 aa10.8□□□□□ -0.68
SLC44A1-202ENST00000374723 LHBP01229 141 aa10.8□□□□□ -0.68
SLC44A1-202ENST00000374723 C1orf159Q96HA4 380 aa10.8□□□□□ -0.68
SLC44A1-202ENST00000374723 KLF12Q9Y4X4 402 aa10.8□□□□□ -0.68
SLC44A1-202ENST00000374723 TICRRQ7Z2Z1 1910 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 FOXF2Q12947 444 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 TMEM200BQ69YZ2 307 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 SPSB3Q6PJ21 355 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 LURAP1LQ8IV03 231 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 EFNB3Q15768 340 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 LSM4Q9Y4Z0 139 aaKnown RBP10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 RPL23P62829 140 aaKnown RBP10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 MINOS1Q5TGZ0 78 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 MINOS1-NBL1R4GNA1 71 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 IFI27L1Q96BM0 104 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 EXOC3-AS1Q8N2X6 119 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 ROS1P08922 2347 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 LINC01549A6NIU2 74 aa10.79□□□□□ -0.68
SLC44A1-202ENST00000374723 UNQ6494/PRO21346Q6UXR6 183 aa10.78□□□□□ -0.68
SLC44A1-202ENST00000374723 CHCHD1Q96BP2 118 aaKnown RBP10.78□□□□□ -0.68
SLC44A1-202ENST00000374723 SLC25A39Q9BZJ4 359 aaPredicted RBP10.78□□□□□ -0.68
SLC44A1-202ENST00000374723 A0A087WWC5 75 aa10.78□□□□□ -0.68
SLC44A1-202ENST00000374723 ZNF625Q96I27 306 aaPredicted RBP10.78□□□□□ -0.68
SLC44A1-202ENST00000374723 THSD7AQ9UPZ6 1657 aa10.78□□□□□ -0.68
SLC44A1-202ENST00000374723 ZNF561-AS1K7EIQ3 104 aa10.78□□□□□ -0.68
SLC44A1-202ENST00000374723 LINC00271P0C7V0 271 aa10.78□□□□□ -0.68
SLC44A1-202ENST00000374723 DUTP33316 252 aaKnown RBP10.78□□□□□ -0.68
SLC44A1-202ENST00000374723 TPTE2P1Q5T6R2 138 aa10.78□□□□□ -0.68
SLC44A1-202ENST00000374723 FBLIM1Q8WUP2 373 aa10.78□□□□□ -0.68
SLC44A1-202ENST00000374723 SEC11AP67812 179 aa10.77□□□□□ -0.68
SLC44A1-202ENST00000374723 USMG5Q96IX5 58 aa10.77□□□□□ -0.68
SLC44A1-202ENST00000374723 F5H768 121 aa10.77□□□□□ -0.68
SLC44A1-202ENST00000374723 OVOL2Q9BRP0 275 aa10.77□□□□□ -0.68
SLC44A1-202ENST00000374723 IGHV1-3A0A0C4DH29 117 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 C1QTNF9P0C862 333 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 ZNF329Q86UD4 541 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 TRAV13-1A0A0B4J241 112 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 IGKV1D-13A0A0B4J2D9 117 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 IGHV1-8P0DP01 117 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 IGKV1-13P0DP09 117 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 PLEKHB2Q96CS7 222 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 TMEM126AQ9H061 195 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 MRPL14Q6P1L8 145 aaKnown RBP10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 OSTCQ9NRP0 149 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 TIMP3P35625 211 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 RBMY1FQ15415 496 aaKnown RBP10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 GTF3AQ92664 365 aaKnown RBP10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 DNAJC30Q96LL9 226 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 SCRT1Q9BWW7 348 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 GNB1LQ9BYB4 327 aa10.77□□□□□ -0.69
SLC44A1-202ENST00000374723 A0A1W2PRE2 83 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 FAM90A9PA6NNJ1 464 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 TNFSF13O75888 250 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 GATA4P43694 442 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 DLX4Q92988 240 aaPredicted RBP10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 PKDREJQ9NTG1 2253 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 ZNF138P52744 262 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 SAMD5Q5TGI4 173 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 EML6Q6ZMW3 1958 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 PSG1P11464 419 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 A8MXK9 166 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 TMEM178BH3BS89 294 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 NCR2O95944 276 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 USF3Q68DE3 2245 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 FAM223BA6NKX1 122 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 FAM223AQ8IWN6 122 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 TRAV5A0A0B4J249 113 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 TGFBR3LH3BV60 316 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 GAGE13Q4V321 117 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 LINC00477Q96M19 166 aa10.76□□□□□ -0.69
SLC44A1-202ENST00000374723 PLCE1Q9P212 2302 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 IL18BPO95998 194 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 NKAPP1Q8N9T2 125 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 SNHG12Q9BXW3 62 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 VCYO14598 125 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 DAD1P61803 113 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 TSKUQ8WUA8 353 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 D6R8Y8 96 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 CSTL1Q9H114 145 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 ZNF114Q8NC26 417 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 LAMTOR2Q9Y2Q5 125 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 IGLV3-19P01714 112 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 A0A0G2JNJ9 132 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 Q9UFV3 132 aa10.75□□□□□ -0.69
SLC44A1-202ENST00000374723 E9PQ18 207 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 PINLYPA6NC86 204 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 ERVH48-1M5A8F1 160 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 CFHR3Q02985 330 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 ZNF479Q96JC4 524 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 LYZL4Q96KX0 146 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 MGAMO43451 1857 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 NRXN2Q9P2S2 1712 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 TRAV9-2A0A087WT02 112 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 M0R1W7 72 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 WDR81Q562E7 1941 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 OCC1Q8TAD7 63 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 ADAMTS7Q9UKP4 1686 aa10.74□□□□□ -0.69
SLC44A1-202ENST00000374723 SHANK1Q9Y566 2161 aa10.73□□□□□ -0.69
SLC44A1-202ENST00000374723 Q5PR19 223 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms