RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 SFRP2Q96HF1 295 aa14.59□□□□□ -0.07
RXRB-202ENST00000374685 NCBP2LA6PVI3 153 aaKnown RBP14.59□□□□□ -0.07
RXRB-202ENST00000374685 HSBP1L1C9JCN9 74 aa14.59□□□□□ -0.07
RXRB-202ENST00000374685 FNDC10F2Z333 226 aa14.59□□□□□ -0.07
RXRB-202ENST00000374685 YPEL3P61236 119 aaPredicted RBP14.59□□□□□ -0.07
RXRB-202ENST00000374685 DPM3Q9P2X0 92 aa14.59□□□□□ -0.07
RXRB-202ENST00000374685 CBY3A6NI87 242 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 SPINK4O60575 86 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 CD99P14209 185 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 PATE2Q6UY27 113 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 PQLC2Q6ZP29 291 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 LINC00305Q7Z4B0 112 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 RNF2Q99496 336 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 CELSR2Q9HCU4 2923 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 TCRBV4S1A1TA0A5B7 111 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 K7EN84 100 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 IGLC2P0DOY2 106 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 IGLC3P0DOY3 106 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 MGST1P10620 155 aaKnown RBP14.58□□□□□ -0.08
RXRB-202ENST00000374685 ADMP35318 185 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 NEU4Q8WWR8 484 aaPredicted RBP14.58□□□□□ -0.08
RXRB-202ENST00000374685 ITLN2Q8WWU7 325 aaPredicted RBP14.58□□□□□ -0.08
RXRB-202ENST00000374685 SLC25A2Q9BXI2 301 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 TMEM167BQ9NRX6 74 aa14.58□□□□□ -0.08
RXRB-202ENST00000374685 FOXL1Q12952 345 aa14.57□□□□□ -0.08
RXRB-202ENST00000374685 TMEM249Q2WGJ8 235 aa14.57□□□□□ -0.08
RXRB-202ENST00000374685 CENPWQ5EE01 88 aa14.57□□□□□ -0.08
RXRB-202ENST00000374685 VMO1Q7Z5L0 202 aa14.57□□□□□ -0.08
RXRB-202ENST00000374685 Q8N976 141 aa14.57□□□□□ -0.08
RXRB-202ENST00000374685 CSTL1Q9H114 145 aa14.57□□□□□ -0.08
RXRB-202ENST00000374685 POLQO75417 2590 aa14.57□□□□□ -0.08
RXRB-202ENST00000374685 TOX4O94842 621 aa14.57□□□□□ -0.08
RXRB-202ENST00000374685 RBP4P02753 201 aa14.57□□□□□ -0.08
RXRB-202ENST00000374685 HNRNPA3P51991 378 aaKnown RBP14.57□□□□□ -0.08
RXRB-202ENST00000374685 KIR3DL3Q8N743 410 aa14.57□□□□□ -0.08
RXRB-202ENST00000374685 OR4C5Q8NGB2 326 aa14.57□□□□□ -0.08
RXRB-202ENST00000374685 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.57□□□□□ -0.081e-7■■■□□ 15.5
RXRB-202ENST00000374685 TRAV34A0A0B4J273 112 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 HELTA6NFD8 242 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 ATP5IP56385 69 aaPredicted RBP14.56□□□□□ -0.08
RXRB-202ENST00000374685 RPS20P60866 119 aaKnown RBP14.56□□□□□ -0.08
RXRB-202ENST00000374685 FXYD3Q14802 87 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 MAJINQ3KP22 176 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 VPS25Q9BRG1 176 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 TMEM238LA0A1B0GVL6 79 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 HYPMO75409 117 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 GNG4P50150 75 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 SPATA45Q537H7 98 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 DYNAPQ8N1N2 210 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 LY6G5BQ8NDX9 201 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 PAXXQ9BUH6 204 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 TEX22C9J3V5 150 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 TMEM238C9JI98 176 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 SLC35B1P78383 322 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 WNT10AQ9GZT5 417 aa14.56□□□□□ -0.08
RXRB-202ENST00000374685 GRIFINA4D1Z8 144 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 SERF1AO75920 110 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 CRYGBP07316 175 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 LYZP61626 148 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 UNQ5815/PRO19632Q6UWF5 114 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 Q6ZN92 141 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 OR10G8Q8NGN5 311 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 C8orf46Q8TAG6 207 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 FAM167A-AS1Q96KT0 104 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 TXN2Q99757 166 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 RNASE7Q9H1E1 156 aaKnown RBP14.55□□□□□ -0.08
RXRB-202ENST00000374685 LRRK2Q5S007 2527 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 TRAV30A0A087WSZ9 112 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 BPESC1Q9GZL8 116 aa14.55□□□□□ -0.08
RXRB-202ENST00000374685 LY6LH3BQJ8 138 aa14.54□□□□□ -0.08
RXRB-202ENST00000374685 TCL1AP56279 114 aa14.54□□□□□ -0.08
RXRB-202ENST00000374685 GNG5P63218 68 aa14.54□□□□□ -0.08
RXRB-202ENST00000374685 MRPS16Q9Y3D3 137 aaKnown RBP14.54□□□□□ -0.08
RXRB-202ENST00000374685 PSMB11A5LHX3 300 aa14.54□□□□□ -0.08
RXRB-202ENST00000374685 M0QZ24 198 aa14.54□□□□□ -0.08
RXRB-202ENST00000374685 EAF1Q96JC9 268 aaPredicted RBP14.54□□□□□ -0.08
RXRB-202ENST00000374685 SERTAD4Q9NUC0 356 aa14.54□□□□□ -0.08
RXRB-202ENST00000374685 FBXL7Q9UJT9 491 aa14.54□□□□□ -0.08
RXRB-202ENST00000374685 Q6ZVH6 145 aa14.53□□□□□ -0.08
RXRB-202ENST00000374685 F11RQ9Y624 299 aaKnown RBP14.53□□□□□ -0.08
RXRB-202ENST00000374685 IGHV3OR16-10A0A075B7F0 116 aa14.53□□□□□ -0.08
RXRB-202ENST00000374685 DIRC3C9JPN6 131 aa14.53□□□□□ -0.08
RXRB-202ENST00000374685 NBR2O15453 112 aa14.53□□□□□ -0.08
RXRB-202ENST00000374685 RPL19P84098 196 aaKnown RBP14.53□□□□□ -0.08
RXRB-202ENST00000374685 DTX2Q86UW9 622 aa14.53□□□□□ -0.08
RXRB-202ENST00000374685 TXNDC17Q9BRA2 123 aa14.53□□□□□ -0.08
RXRB-202ENST00000374685 ZNF462Q96JM2 2506 aa14.53□□□□□ -0.08
RXRB-202ENST00000374685 IGHV3-23P01764 117 aa14.52□□□□□ -0.08
RXRB-202ENST00000374685 PRTN3P24158 256 aa14.52□□□□□ -0.08
RXRB-202ENST00000374685 CEACAM3P40198 252 aa14.52□□□□□ -0.08
RXRB-202ENST00000374685 OR1L4Q8NGR5 311 aa14.52□□□□□ -0.08
RXRB-202ENST00000374685 INS-IGF2F8WCM5 200 aa14.52□□□□□ -0.09
RXRB-202ENST00000374685 CRISP2P16562 243 aa14.52□□□□□ -0.09
RXRB-202ENST00000374685 PRR27Q6MZM9 219 aa14.52□□□□□ -0.09
RXRB-202ENST00000374685 EPG5Q9HCE0 2579 aa14.52□□□□□ -0.09
RXRB-202ENST00000374685 FRMD6-AS1P0C7T7 363 aa14.51□□□□□ -0.09
RXRB-202ENST00000374685 TIGITQ495A1 244 aa14.51□□□□□ -0.09
RXRB-202ENST00000374685 OCIAD2Q56VL3 154 aa14.51□□□□□ -0.09
RXRB-202ENST00000374685 RNF114Q9Y508 228 aa14.51□□□□□ -0.09
RXRB-202ENST00000374685 USP9YO00507 2555 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 688.9 ms