RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 OR8B3Q8NGG8 313 aa13.57□□□□□ -0.24
RXRB-201ENST00000374680 OR8B2Q96RD0 313 aa13.57□□□□□ -0.24
RXRB-201ENST00000374680 Q9H3A6 140 aa13.57□□□□□ -0.24
RXRB-201ENST00000374680 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.57□□□□□ -0.241e-7■■■□□ 15.5
RXRB-201ENST00000374680 AMY1AP04745 511 aa13.57□□□□□ -0.24
RXRB-201ENST00000374680 CIARTQ8N365 385 aaPredicted RBP13.57□□□□□ -0.24
RXRB-201ENST00000374680 RNF2Q99496 336 aa13.57□□□□□ -0.24
RXRB-201ENST00000374680 NDUFAF3Q9BU61 184 aa13.57□□□□□ -0.24
RXRB-201ENST00000374680 ZNF596Q8TC21 504 aa13.57□□□□□ -0.24
RXRB-201ENST00000374680 PGLYRP4Q96LB8 373 aa13.57□□□□□ -0.24
RXRB-201ENST00000374680 F11RQ9Y624 299 aaKnown RBP13.57□□□□□ -0.24
RXRB-201ENST00000374680 SMIM27A0A1W2PRY6 76 aa13.56□□□□□ -0.24
RXRB-201ENST00000374680 ETFRF1Q6IPR1 90 aa13.56□□□□□ -0.24
RXRB-201ENST00000374680 GOLT1AQ6ZVE7 132 aa13.56□□□□□ -0.24
RXRB-201ENST00000374680 PRNTQ86SH4 94 aa13.56□□□□□ -0.24
RXRB-201ENST00000374680 RASL11BQ9BPW5 248 aa13.56□□□□□ -0.24
RXRB-201ENST00000374680 A0A1W2PS18 150 aa13.56□□□□□ -0.24
RXRB-201ENST00000374680 TAS2R60P59551 318 aa13.56□□□□□ -0.24
RXRB-201ENST00000374680 NOL4LQ96MY1 436 aaPredicted RBP13.56□□□□□ -0.24
RXRB-201ENST00000374680 NRN1Q9NPD7 142 aa13.56□□□□□ -0.24
RXRB-201ENST00000374680 IZUMO1RA6ND01 250 aa13.55□□□□□ -0.24
RXRB-201ENST00000374680 BRS3P32247 399 aa13.55□□□□□ -0.24
RXRB-201ENST00000374680 PMCHL1Q16048 86 aa13.55□□□□□ -0.24
RXRB-201ENST00000374680 LCN12Q6JVE5 192 aa13.55□□□□□ -0.24
RXRB-201ENST00000374680 HIGD1AQ9Y241 93 aa13.55□□□□□ -0.24
RXRB-201ENST00000374680 GPX1P07203 203 aa13.55□□□□□ -0.24
RXRB-201ENST00000374680 TPPP3Q9BW30 176 aa13.55□□□□□ -0.24
RXRB-201ENST00000374680 CRYGBP07316 175 aa13.54□□□□□ -0.24
RXRB-201ENST00000374680 HTR1DP28221 377 aa13.54□□□□□ -0.24
RXRB-201ENST00000374680 RPL19P84098 196 aaKnown RBP13.54□□□□□ -0.24
RXRB-201ENST00000374680 FAM71F2Q6NXP2 309 aa13.54□□□□□ -0.24
RXRB-201ENST00000374680 WDR73Q6P4I2 378 aa13.54□□□□□ -0.24
RXRB-201ENST00000374680 ARL2-SNX15V9GYD0 113 aa13.54□□□□□ -0.24
RXRB-201ENST00000374680 SH2D7A6NKC9 451 aaPredicted RBP13.54□□□□□ -0.24
RXRB-201ENST00000374680 LIPFP07098 398 aa13.54□□□□□ -0.24
RXRB-201ENST00000374680 LY6DQ14210 128 aa13.54□□□□□ -0.24
RXRB-201ENST00000374680 TPTE2P1Q5T6R2 138 aa13.54□□□□□ -0.24
RXRB-201ENST00000374680 TMEM116Q8NCL8 245 aa13.54□□□□□ -0.24
RXRB-201ENST00000374680 SNHG12Q9BXW3 62 aa13.54□□□□□ -0.24
RXRB-201ENST00000374680 ZNF586Q9NXT0 402 aa13.54□□□□□ -0.24
RXRB-201ENST00000374680 CRYGCP07315 174 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 IGLC1P0CG04 106 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 CA7P43166 264 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 PAFAH1B2P68402 229 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 ADORA2A-AS1P86434 159 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 TRGV9Q99603 122 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 DIRC3C9JPN6 131 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 INS-IGF2F8WCM5 200 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 G0S2P27469 103 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 FCGR2BP31994 310 aaPredicted RBP13.53□□□□□ -0.24
RXRB-201ENST00000374680 RNASEKQ6P5S7 137 aaKnown RBP13.53□□□□□ -0.24
RXRB-201ENST00000374680 C8orf31Q8N9H6 132 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 SLC25A39Q9BZJ4 359 aaPredicted RBP13.53□□□□□ -0.24
RXRB-201ENST00000374680 M0R3E3 92 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 C1orf194Q5T5A4 169 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 C8orf46Q8TAG6 207 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 DAZAP1Q96EP5 407 aaKnown RBP13.53□□□□□ -0.24
RXRB-201ENST00000374680 RBM14Q96PK6 669 aaKnown RBP13.53□□□□□ -0.24
RXRB-201ENST00000374680 CHODLQ9H9P2 273 aa13.53□□□□□ -0.24
RXRB-201ENST00000374680 TRAV9-1A0A075B6T8 112 aa13.52□□□□□ -0.24
RXRB-201ENST00000374680 IGKV1-17P01599 117 aa13.52□□□□□ -0.24
RXRB-201ENST00000374680 IL4P05112 153 aa13.52□□□□□ -0.24
RXRB-201ENST00000374680 LBHQ53QV2 105 aaPredicted RBP13.52□□□□□ -0.24
RXRB-201ENST00000374680 GPR82Q96P67 336 aa13.52□□□□□ -0.24
RXRB-201ENST00000374680 VAMP8Q9BV40 100 aa13.52□□□□□ -0.24
RXRB-201ENST00000374680 LPAR2Q9HBW0 351 aa13.52□□□□□ -0.24
RXRB-201ENST00000374680 HLA-DQA1P01909 254 aa13.52□□□□□ -0.25
RXRB-201ENST00000374680 GP9P14770 177 aa13.52□□□□□ -0.25
RXRB-201ENST00000374680 Q0VG73 95 aa13.52□□□□□ -0.25
RXRB-201ENST00000374680 MAJINQ3KP22 176 aa13.52□□□□□ -0.25
RXRB-201ENST00000374680 CRYBG3Q68DQ2 2970 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 MUC21A0A0G2JKD1 596 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 MUC21A0A140T8X8 626 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 TCRAP04437 139 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 TMEM183BQ1AE95 376 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 MUC21Q5SSG8 566 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 IGFL4Q6B9Z1 124 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 DYNAPQ8N1N2 210 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 TSKUQ8WUA8 353 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 GRAMD2BQ96HH9 432 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 RAB1BQ9H0U4 201 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 DPM3Q9P2X0 92 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 I3L2K1 104 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 P01737 135 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 ZNF138P52744 262 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 C18orf32Q8TCD1 76 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 CENPEQ02224 2701 aa13.51□□□□□ -0.25
RXRB-201ENST00000374680 ITPR1Q14643 2758 aa13.5□□□□□ -0.25
RXRB-201ENST00000374680 LOC105371242A0A075B767 164 aa13.5□□□□□ -0.25
RXRB-201ENST00000374680 HIST1H1EP10412 219 aaKnown RBP13.5□□□□□ -0.25
RXRB-201ENST00000374680 PAX1P15863 534 aa13.5□□□□□ -0.25
RXRB-201ENST00000374680 MYCNOSP40205 109 aa13.5□□□□□ -0.25
RXRB-201ENST00000374680 TMSB15BA0A087X1C1 80 aa13.5□□□□□ -0.25
RXRB-201ENST00000374680 MT-ND6P03923 174 aa13.5□□□□□ -0.25
RXRB-201ENST00000374680 GTSF1Q8WW33 167 aa13.5□□□□□ -0.25
RXRB-201ENST00000374680 TRBV9A0A0B4J1U6 114 aa13.5□□□□□ -0.25
RXRB-201ENST00000374680 HSBP1O75506 76 aa13.5□□□□□ -0.25
RXRB-201ENST00000374680 COL8A1P27658 744 aa13.5□□□□□ -0.25
RXRB-201ENST00000374680 BEND2Q8NDZ0 799 aa13.5□□□□□ -0.25
RXRB-201ENST00000374680 STXBP6Q8NFX7 210 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms