RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 HMGB3O15347 200 aaKnown RBP7.5□□□□□ -1.21
PTPN20-202ENST00000374339 OR7C2O60412 319 aa7.5□□□□□ -1.21
PTPN20-202ENST00000374339 ARL14EPLP0DKL9 152 aa7.5□□□□□ -1.21
PTPN20-202ENST00000374339 FGF8P55075 233 aaPredicted RBP7.5□□□□□ -1.21
PTPN20-202ENST00000374339 PEA15Q15121 130 aa7.5□□□□□ -1.21
PTPN20-202ENST00000374339 PATE2Q6UY27 113 aa7.5□□□□□ -1.21
PTPN20-202ENST00000374339 IQCF2Q8IXL9 164 aa7.5□□□□□ -1.21
PTPN20-202ENST00000374339 OR5AU1Q8NGC0 362 aa7.5□□□□□ -1.21
PTPN20-202ENST00000374339 OR4F5Q8NH21 305 aa7.5□□□□□ -1.21
PTPN20-202ENST00000374339 WFDC12Q8WWY7 111 aa7.5□□□□□ -1.21
PTPN20-202ENST00000374339 EIF5A2Q9GZV4 153 aaKnown RBP7.5□□□□□ -1.21
PTPN20-202ENST00000374339 MRPL27Q9P0M9 148 aaKnown RBP7.5□□□□□ -1.21
PTPN20-202ENST00000374339 PEF1Q9UBV8 284 aaKnown RBP7.5□□□□□ -1.21
PTPN20-202ENST00000374339 RABAC1Q9UI14 185 aa7.5□□□□□ -1.21
PTPN20-202ENST00000374339 NSD1Q96L73 2696 aaPredicted RBP7.5□□□□□ -1.21
PTPN20-202ENST00000374339 ANKRD34BA5PLL1 514 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 RBFOX3A6NFN3 312 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 NDUFA4O00483 81 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 GGCTO75223 188 aaKnown RBP7.49□□□□□ -1.21
PTPN20-202ENST00000374339 IGHV3-11P01762 117 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 RPLP1P05386 114 aaKnown RBP7.49□□□□□ -1.21
PTPN20-202ENST00000374339 GCHFRP30047 84 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 CDX1P47902 265 aaPredicted RBP7.49□□□□□ -1.21
PTPN20-202ENST00000374339 CCL20P78556 96 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 GUK1Q16774 197 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 C10orf99Q6UWK7 81 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 LCNL1Q6ZST4 164 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 MIR17HGQ75NE6 70 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 UHRF2Q96PU4 802 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 SHANK2-AS3Q9BTD1 123 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 SLC25A39Q9BZJ4 359 aaPredicted RBP7.49□□□□□ -1.21
PTPN20-202ENST00000374339 TMEM167BQ9NRX6 74 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 PGPEP1Q9NXJ5 209 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 GNG13Q9P2W3 67 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 ARL2-SNX15V9GYD0 113 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 ZFHX3Q15911 3703 aa7.49□□□□□ -1.21
PTPN20-202ENST00000374339 PPP5D1E7EU14 171 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 LGALS1P09382 135 aaKnown RBP7.48□□□□□ -1.21
PTPN20-202ENST00000374339 BCL2P10415 239 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 S100A1P23297 94 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 KIAA0141Q14154 515 aaPredicted RBP7.48□□□□□ -1.21
PTPN20-202ENST00000374339 USF2Q15853 346 aaPredicted RBP7.48□□□□□ -1.21
PTPN20-202ENST00000374339 TOR2AQ5JU69 321 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 SPATA31B1PQ5VZV4 182 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 TOMM20LQ6UXN7 152 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 LINC01006Q8NI28 216 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 TXNDC17Q9BRA2 123 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 SLC25A2Q9BXI2 301 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 TREM1Q9NP99 234 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 VAX2Q9UIW0 290 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 MTORP42345 2549 aa7.48□□□□□ -1.21
PTPN20-202ENST00000374339 IGHV3-35A0A0C4DH35 117 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 A0A1B0GUS0 222 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 H3BRN7 92 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 NDUFS6O75380 124 aaKnown RBP7.47□□□□□ -1.21
PTPN20-202ENST00000374339 UBE2L3P68036 154 aaKnown RBP7.47□□□□□ -1.21
PTPN20-202ENST00000374339 HAGHQ16775 308 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 FAM106AQ4KMX7 169 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 ZNF506Q5JVG8 444 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 MORN5Q5VZ52 161 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 BPIFA4PQ86YQ2 179 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 SUN5Q8TC36 379 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 WIPF2Q8TF74 440 aaPredicted RBP7.47□□□□□ -1.21
PTPN20-202ENST00000374339 C4orf3Q8WVX3 66 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 NARS2Q96I59 477 aaKnown RBP7.47□□□□□ -1.21
PTPN20-202ENST00000374339 FAM167A-AS1Q96KT0 104 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 METTL26Q96S19 204 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 PAXXQ9BUH6 204 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 OR51M1Q9H341 326 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 TMEM14CQ9P0S9 112 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 RNF114Q9Y508 228 aa7.47□□□□□ -1.21
PTPN20-202ENST00000374339 LOC102723971A0A1B0GUV8 181 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 CLPSL1A2RUU4 121 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 ZNF98A6NK75 572 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 KRBOX1C9JBD0 128 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 HSPB1P04792 205 aaKnown RBP7.46□□□□□ -1.21
PTPN20-202ENST00000374339 CD5P06127 495 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 NPPCP23582 126 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 MEF2BQ02080 365 aaPredicted RBP7.46□□□□□ -1.21
PTPN20-202ENST00000374339 RPEL1Q2QD12 228 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 C1orf194Q5T5A4 169 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 GPHB5Q86YW7 130 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 GPR82Q96P67 336 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 OR5B12Q96R08 314 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 SCRT1Q9BWW7 348 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 NKX6-2Q9C056 277 aaPredicted RBP7.46□□□□□ -1.21
PTPN20-202ENST00000374339 TMPRSS5Q9H3S3 457 aa7.46□□□□□ -1.21
PTPN20-202ENST00000374339 TRAV5A0A0B4J249 113 aa7.46□□□□□ -1.22
PTPN20-202ENST00000374339 A0A1W2PRE2 83 aa7.46□□□□□ -1.22
PTPN20-202ENST00000374339 I3L521 148 aa7.46□□□□□ -1.22
PTPN20-202ENST00000374339 PDE6DO43924 150 aa7.46□□□□□ -1.22
PTPN20-202ENST00000374339 PAGE4O60829 102 aa7.46□□□□□ -1.22
PTPN20-202ENST00000374339 EIF3GO75821 320 aaKnown RBP eCLIP7.46□□□□□ -1.22
PTPN20-202ENST00000374339 TRBV12-3P01733 135 aa7.46□□□□□ -1.22
PTPN20-202ENST00000374339 OR10J4P0C629 311 aa7.46□□□□□ -1.22
PTPN20-202ENST00000374339 GP9P14770 177 aa7.46□□□□□ -1.22
PTPN20-202ENST00000374339 RPL7P18124 248 aaKnown RBP7.46□□□□□ -1.22
PTPN20-202ENST00000374339 ZP3P21754 424 aa7.46□□□□□ -1.22
PTPN20-202ENST00000374339 CRYBB3P26998 211 aa7.46□□□□□ -1.22
PTPN20-202ENST00000374339 ICAM4Q14773 271 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms