RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 OR4F17Q8NGA8 305 aa14.34□□□□□ -0.11
CD40-201ENST00000372276 OR4B1Q8NGF8 309 aa14.34□□□□□ -0.11
CD40-201ENST00000372276 SHANK2-AS3Q9BTD1 123 aa14.34□□□□□ -0.11
CD40-201ENST00000372276 PRO1933Q9H354 126 aa14.34□□□□□ -0.11
CD40-201ENST00000372276 ZNF586Q9NXT0 402 aa14.34□□□□□ -0.11
CD40-201ENST00000372276 TP53TG3Q9ULZ0 132 aa14.34□□□□□ -0.11
CD40-201ENST00000372276 ZFYVE26Q68DK2 2539 aa14.34□□□□□ -0.11
CD40-201ENST00000372276 ANKHD1Q8IWZ3 2542 aaKnown RBP14.34□□□□□ -0.11
CD40-201ENST00000372276 CHD6Q8TD26 2715 aa14.34□□□□□ -0.11
CD40-201ENST00000372276 K7EIM0 57 aa14.33□□□□□ -0.11
CD40-201ENST00000372276 TCL1AP56279 114 aa14.33□□□□□ -0.11
CD40-201ENST00000372276 EBI3Q14213 229 aa14.33□□□□□ -0.11
CD40-201ENST00000372276 CYB5R2Q6BCY4 276 aa14.33□□□□□ -0.11
CD40-201ENST00000372276 IGFBPL1Q8WX77 278 aa14.33□□□□□ -0.11
CD40-201ENST00000372276 RPP21Q9H633 154 aaKnown RBP14.33□□□□□ -0.11
CD40-201ENST00000372276 GNB4Q9HAV0 340 aa14.33□□□□□ -0.11
CD40-201ENST00000372276 TLN1Q9Y490 2541 aaKnown RBP14.33□□□□□ -0.12
CD40-201ENST00000372276 TRAV34A0A0B4J273 112 aa14.33□□□□□ -0.12
CD40-201ENST00000372276 NUPR1O60356 82 aa14.33□□□□□ -0.12
CD40-201ENST00000372276 ZNF253O75346 499 aa14.33□□□□□ -0.12
CD40-201ENST00000372276 IGKV1-17P01599 117 aa14.33□□□□□ -0.12
CD40-201ENST00000372276 MFAP4P55083 255 aa14.33□□□□□ -0.12
CD40-201ENST00000372276 MRPL54Q6P161 138 aaKnown RBP14.33□□□□□ -0.12
CD40-201ENST00000372276 ARL6IP6Q8N6S5 226 aa14.33□□□□□ -0.12
CD40-201ENST00000372276 NUP35Q8NFH5 326 aa14.33□□□□□ -0.12
CD40-201ENST00000372276 KCNS1Q96KK3 526 aa14.33□□□□□ -0.12
CD40-201ENST00000372276 PRSS22Q9GZN4 317 aa14.33□□□□□ -0.12
CD40-201ENST00000372276 C1RLQ9NZP8 487 aa14.33□□□□□ -0.12
CD40-201ENST00000372276 ZMAT5Q9UDW3 170 aaKnown RBP14.33□□□□□ -0.12
CD40-201ENST00000372276 TBL2Q9Y4P3 447 aaKnown RBP14.33□□□□□ -0.12
CD40-201ENST00000372276 BOD1L1Q8NFC6 3051 aa14.32□□□□□ -0.12
CD40-201ENST00000372276 PIEZO2Q9H5I5 2752 aa14.32□□□□□ -0.12
CD40-201ENST00000372276 OR2J3O76001 311 aa14.32□□□□□ -0.12
CD40-201ENST00000372276 P01737 135 aa14.32□□□□□ -0.12
CD40-201ENST00000372276 GPX1P07203 203 aa14.32□□□□□ -0.12
CD40-201ENST00000372276 TTC9CQ8N5M4 171 aa14.32□□□□□ -0.12
CD40-201ENST00000372276 NHLRC2Q8NBF2 726 aa14.32□□□□□ -0.12
CD40-201ENST00000372276 HILPDAQ9Y5L2 63 aa14.32□□□□□ -0.12
CD40-201ENST00000372276 SERTM2A0A1B0GWG4 89 aa14.31□□□□□ -0.12
CD40-201ENST00000372276 H3BRN7 92 aa14.31□□□□□ -0.12
CD40-201ENST00000372276 BMPR1BO00238 502 aa14.31□□□□□ -0.12
CD40-201ENST00000372276 PLXNB1O43157 2135 aa14.31□□□□□ -0.12
CD40-201ENST00000372276 APELAP0DMC3 54 aa14.31□□□□□ -0.12
CD40-201ENST00000372276 DLX1P56177 255 aa14.31□□□□□ -0.12
CD40-201ENST00000372276 GNG5P63218 68 aa14.31□□□□□ -0.12
CD40-201ENST00000372276 KLF5Q13887 457 aaPredicted RBP14.31□□□□□ -0.12
CD40-201ENST00000372276 PDE6HQ13956 83 aa14.31□□□□□ -0.12
CD40-201ENST00000372276 RUSC1-AS1Q66K80 236 aa14.31□□□□□ -0.12
CD40-201ENST00000372276 MRPL52Q86TS9 123 aaKnown RBP14.31□□□□□ -0.12
CD40-201ENST00000372276 ZFP30Q9Y2G7 519 aa14.31□□□□□ -0.12
CD40-201ENST00000372276 IGHV3-21A0A0B4J1V1 117 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 WI2-2373I1.2A0A1W2PRP0 233 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 C19orf71A6NCJ1 209 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 ZNF705FA8MVS1 300 aaPredicted RBP14.3□□□□□ -0.12
CD40-201ENST00000372276 SPINK4O60575 86 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 ZNF705DP0CH99 300 aaPredicted RBP14.3□□□□□ -0.12
CD40-201ENST00000372276 ZNF705BP0CI00 300 aaPredicted RBP14.3□□□□□ -0.12
CD40-201ENST00000372276 LINC00310P59036 64 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 LY6DQ14210 128 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 HES1Q14469 280 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 C19orf35Q6ZS72 473 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 TXN2Q99757 166 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 HSPB9Q9BQS6 159 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 KIR2DL5BA0A0G2JN68 375 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 KIR2DL5BA0A0G2JPC4 375 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 FBLL1A6NHQ2 334 aaKnown RBP14.3□□□□□ -0.12
CD40-201ENST00000372276 HIGD1CA8MV81 97 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 HOXB4P17483 251 aaPredicted RBP14.3□□□□□ -0.12
CD40-201ENST00000372276 SRIP30626 198 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 DMRTA1Q5VZB9 504 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 PRR27Q6MZM9 219 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 VMO1Q7Z5L0 202 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 KIR2DL5AQ8N109 375 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 Q8N6K4 173 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 TMEM75Q8N9X5 138 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 FAM168AQ92567 244 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 ARPC1AQ92747 370 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 RNF125Q96EQ8 232 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 BBC3Q96PG8 261 aaPredicted RBP14.3□□□□□ -0.12
CD40-201ENST00000372276 NEU1Q99519 415 aa14.3□□□□□ -0.12
CD40-201ENST00000372276 FAM208BQ5VWN6 2430 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 IGLV11-55A0A075B6I3 123 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 TRBV19A0A075B6N1 114 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 A0A1B0GUS0 222 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 GNG7O60262 68 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 RAB4AP20338 218 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 HBBP68871 147 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 LDLRAD2Q5SZI1 272 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 TEX43Q6ZNM6 134 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 Q6ZWC4 215 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 ZNF491Q8N8L2 437 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 TBX15Q96SF7 602 aa14.29□□□□□ -0.12
CD40-201ENST00000372276 A0A1B0GXF2 115 aa14.28□□□□□ -0.12
CD40-201ENST00000372276 NPIPB6E9PJ23 425 aa14.28□□□□□ -0.12
CD40-201ENST00000372276 FCGR2BP31994 310 aaPredicted RBP14.28□□□□□ -0.12
CD40-201ENST00000372276 SLC35B1P78383 322 aa14.28□□□□□ -0.12
CD40-201ENST00000372276 CDSNQ15517 529 aa14.28□□□□□ -0.12
CD40-201ENST00000372276 RBPMS2Q6ZRY4 209 aaKnown RBP14.28□□□□□ -0.12
CD40-201ENST00000372276 Q86TA4 180 aa14.28□□□□□ -0.12
CD40-201ENST00000372276 A6NNC1 897 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms