RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 OCC1Q8TAD7 63 aa14.56□□□□□ -0.08
VEGFA-206ENST00000372077 SRSF12Q8WXF0 261 aaKnown RBP14.56□□□□□ -0.08
VEGFA-206ENST00000372077 RASL11BQ9BPW5 248 aa14.56□□□□□ -0.08
VEGFA-206ENST00000372077 GGTLC1Q9BX51 225 aa14.56□□□□□ -0.08
VEGFA-206ENST00000372077 WDR83OSQ9Y284 106 aa14.56□□□□□ -0.08
VEGFA-206ENST00000372077 LY6EQ16553 131 aa14.55□□□□□ -0.08
VEGFA-206ENST00000372077 MIR17HGQ75NE6 70 aa14.55□□□□□ -0.08
VEGFA-206ENST00000372077 SGK494Q96LW2 274 aa14.55□□□□□ -0.08
VEGFA-206ENST00000372077 SMR3AQ99954 134 aa14.55□□□□□ -0.08
VEGFA-206ENST00000372077 TRAPPC1Q9Y5R8 145 aa14.55□□□□□ -0.08
VEGFA-206ENST00000372077 TEX22C9J3V5 150 aa14.55□□□□□ -0.08
VEGFA-206ENST00000372077 F2Z2F3 143 aa14.55□□□□□ -0.08
VEGFA-206ENST00000372077 LY6G6DO95868 133 aa14.55□□□□□ -0.08
VEGFA-206ENST00000372077 CX3CL1P78423 397 aa14.55□□□□□ -0.08
VEGFA-206ENST00000372077 TMEM242Q9NWH2 141 aa14.55□□□□□ -0.08
VEGFA-206ENST00000372077 IGLC7A0M8Q6 106 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 SCGB1D1O95968 90 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 IGHV4-59P01825 116 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 WT1-ASQ06250 92 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 KIAA1644Q3SXP7 199 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 DMRTA1Q5VZB9 504 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 ETFRF1Q6IPR1 90 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 OR5R1Q8NH85 324 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 SRSF8Q9BRL6 282 aaKnown RBP14.54□□□□□ -0.08
VEGFA-206ENST00000372077 SNHG12Q9BXW3 62 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 IGHV7-81A0A0B4J1V7 117 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 CNIH1O95406 144 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 AMY1AP04745 511 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 SRP14P37108 136 aaKnown RBP14.54□□□□□ -0.08
VEGFA-206ENST00000372077 ERHP84090 104 aaKnown RBP14.54□□□□□ -0.08
VEGFA-206ENST00000372077 STPG3Q8N7X2 389 aa14.54□□□□□ -0.08
VEGFA-206ENST00000372077 IGHV3-21A0A0B4J1V1 117 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 F6UZH7 168 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 ATP5IP56385 69 aaPredicted RBP14.53□□□□□ -0.08
VEGFA-206ENST00000372077 ATP6V1FQ16864 119 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 C19orf35Q6ZS72 473 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 SLC24A4Q8NFF2 622 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 CTDSP1Q9GZU7 261 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 TIMM9Q9Y5J7 89 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 BAHCC1Q9P281 2608 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 TMEM250H0YL14 139 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 LINC00614P0C842 121 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 CD99P14209 185 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 MANBALQ9NQG1 85 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 OTOGQ6ZRI0 2925 aa14.53□□□□□ -0.08
VEGFA-206ENST00000372077 NOL4LQ96MY1 436 aaPredicted RBP14.52□□□□□ -0.08
VEGFA-206ENST00000372077 CA1P00915 261 aaPredicted RBP14.52□□□□□ -0.09
VEGFA-206ENST00000372077 RNASE2P10153 161 aaKnown RBP14.52□□□□□ -0.09
VEGFA-206ENST00000372077 NPY1RP25929 384 aa14.52□□□□□ -0.09
VEGFA-206ENST00000372077 NDPQ00604 133 aa14.52□□□□□ -0.09
VEGFA-206ENST00000372077 C2orf83Q53S99 150 aa14.52□□□□□ -0.09
VEGFA-206ENST00000372077 M0QZK8 103 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 REG1AP05451 166 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 ARPC1AQ92747 370 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 LINC00479Q96M42 142 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 HSPB9Q9BQS6 159 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 TRAV5A0A0B4J249 113 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 TEX38Q6PEX7 206 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 ACY3Q96HD9 319 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 ACANP16112 2415 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 K7EN84 100 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 OR7C2O60412 319 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 EGR2P11161 476 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-206ENST00000372077 CENPVQ7Z7K6 275 aaPredicted RBP14.51□□□□□ -0.09
VEGFA-206ENST00000372077 SFRP2Q96HF1 295 aa14.51□□□□□ -0.09
VEGFA-206ENST00000372077 FAM103A1Q9BTL3 118 aaKnown RBP14.51□□□□□ -0.09
VEGFA-206ENST00000372077 RNASE7Q9H1E1 156 aaKnown RBP14.51□□□□□ -0.09
VEGFA-206ENST00000372077 AREGP15514 252 aa14.5□□□□□ -0.09
VEGFA-206ENST00000372077 CRYBB3P26998 211 aa14.5□□□□□ -0.09
VEGFA-206ENST00000372077 ADMP35318 185 aa14.5□□□□□ -0.09
VEGFA-206ENST00000372077 SIGLECL1Q8N7X8 197 aa14.5□□□□□ -0.09
VEGFA-206ENST00000372077 PRSS46E5RG02 174 aa14.5□□□□□ -0.09
VEGFA-206ENST00000372077 ZNF90Q03938 601 aa14.5□□□□□ -0.09
VEGFA-206ENST00000372077 TDRG1Q3Y452 100 aa14.5□□□□□ -0.09
VEGFA-206ENST00000372077 MORN5Q5VZ52 161 aa14.5□□□□□ -0.09
VEGFA-206ENST00000372077 PVRIGQ6DKI7 326 aa14.5□□□□□ -0.09
VEGFA-206ENST00000372077 UHRF2Q96PU4 802 aa14.5□□□□□ -0.09
VEGFA-206ENST00000372077 VPREB3Q9UKI3 123 aa14.5□□□□□ -0.09
VEGFA-206ENST00000372077 IGKV1OR2-108A0A075B7D4 117 aa14.49□□□□□ -0.09
VEGFA-206ENST00000372077 HOXA3O43365 443 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-206ENST00000372077 GAGE1Q13065 139 aa14.49□□□□□ -0.09
VEGFA-206ENST00000372077 ZNF705FA8MVS1 300 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-206ENST00000372077 H3BTX0 84 aa14.49□□□□□ -0.09
VEGFA-206ENST00000372077 ZNF705DP0CH99 300 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-206ENST00000372077 ZNF705BP0CI00 300 aaPredicted RBP14.49□□□□□ -0.09
VEGFA-206ENST00000372077 CNN1P51911 297 aaKnown RBP14.49□□□□□ -0.09
VEGFA-206ENST00000372077 OR2T6Q8NHC8 308 aa14.49□□□□□ -0.09
VEGFA-206ENST00000372077 ANK3Q12955 4377 aaKnown RBP14.49□□□□□ -0.09
VEGFA-206ENST00000372077 FLNBO75369 2602 aaKnown RBP14.48□□□□□ -0.09
VEGFA-206ENST00000372077 SH2D7A6NKC9 451 aaPredicted RBP14.48□□□□□ -0.09
VEGFA-206ENST00000372077 MGST1P10620 155 aaKnown RBP14.48□□□□□ -0.09
VEGFA-206ENST00000372077 GCHFRP30047 84 aa14.48□□□□□ -0.09
VEGFA-206ENST00000372077 SERTAD4Q9NUC0 356 aa14.48□□□□□ -0.09
VEGFA-206ENST00000372077 TMEM238LA0A1B0GVL6 79 aa14.48□□□□□ -0.09
VEGFA-206ENST00000372077 SUB1P53999 127 aaKnown RBP eCLIP14.48□□□□□ -0.09
VEGFA-206ENST00000372077 ACTL10Q5JWF8 245 aa14.48□□□□□ -0.09
VEGFA-206ENST00000372077 KCNIP4Q6PIL6 250 aa14.48□□□□□ -0.09
VEGFA-206ENST00000372077 C16orf54Q6UWD8 224 aa14.48□□□□□ -0.09
VEGFA-206ENST00000372077 PYGO2Q9BRQ0 406 aa14.48□□□□□ -0.09
VEGFA-206ENST00000372077 M0R143 59 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms