RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 OR51M1Q9H341 326 aa11.15□□□□□ -0.62
LDB3-204ENST00000372066 MRPL36Q9P0J6 103 aaKnown RBP11.15□□□□□ -0.62
LDB3-204ENST00000372066 IGHV2-70DA0A0C4DH43 119 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 GGTLC3B5MD39 225 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 CNIH1O95406 144 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 RPL19P84098 196 aaKnown RBP11.14□□□□□ -0.63
LDB3-204ENST00000372066 TIGITQ495A1 244 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 DNLZQ5SXM8 178 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 LDLRAD2Q5SZI1 272 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 PATE2Q6UY27 113 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 VMO1Q7Z5L0 202 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.14□□□□□ -0.63
LDB3-204ENST00000372066 ELOVL1Q9BW60 279 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 LPAR2Q9HBW0 351 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 PITPNC1Q9UKF7 332 aa11.14□□□□□ -0.63
LDB3-204ENST00000372066 PLXNB1O43157 2135 aa11.13□□□□□ -0.63
LDB3-204ENST00000372066 HYPMO75409 117 aa11.13□□□□□ -0.63
LDB3-204ENST00000372066 CRYBB3P26998 211 aa11.13□□□□□ -0.63
LDB3-204ENST00000372066 LGALS4P56470 323 aa11.13□□□□□ -0.63
LDB3-204ENST00000372066 KLRD1Q13241 179 aa11.13□□□□□ -0.63
LDB3-204ENST00000372066 C5orf64Q2M2E5 130 aa11.13□□□□□ -0.63
LDB3-204ENST00000372066 LINC00305Q7Z4B0 112 aa11.13□□□□□ -0.63
LDB3-204ENST00000372066 HIF1ANQ9NWT6 349 aa11.13□□□□□ -0.63
LDB3-204ENST00000372066 HILPDAQ9Y5L2 63 aa11.13□□□□□ -0.63
LDB3-204ENST00000372066 I3L2K1 104 aa11.12□□□□□ -0.63
LDB3-204ENST00000372066 S100A2P29034 98 aa11.12□□□□□ -0.63
LDB3-204ENST00000372066 SUMO1P63165 101 aaKnown RBP11.12□□□□□ -0.63
LDB3-204ENST00000372066 PRB3Q04118 309 aaPredicted RBP11.12□□□□□ -0.63
LDB3-204ENST00000372066 CENPWQ5EE01 88 aa11.12□□□□□ -0.63
LDB3-204ENST00000372066 ACTL10Q5JWF8 245 aa11.12□□□□□ -0.63
LDB3-204ENST00000372066 OSTCQ9NRP0 149 aa11.12□□□□□ -0.63
LDB3-204ENST00000372066 IL36BQ9NZH7 164 aa11.12□□□□□ -0.63
LDB3-204ENST00000372066 PGPEP1LA6NFU8 196 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 NPIPB5A8MRT5 1133 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 IGLC1P0CG04 106 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 CNN1P51911 297 aaKnown RBP11.11□□□□□ -0.63
LDB3-204ENST00000372066 FXYD3Q14802 87 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 MORN5Q5VZ52 161 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 LHFPL4Q7Z7J7 247 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 S100A7AQ86SG5 101 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 Q8N6K4 173 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 SGMS2Q8NHU3 365 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 FXYD5Q96DB9 178 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 SMIM12Q96EX1 92 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 ZNF48Q96MX3 618 aaPredicted RBP11.11□□□□□ -0.63
LDB3-204ENST00000372066 WNT10AQ9GZT5 417 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 GAR1Q9NY12 217 aaKnown RBP11.11□□□□□ -0.63
LDB3-204ENST00000372066 TRAV30A0A087WSZ9 112 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 TRAV5A0A0B4J249 113 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 K7EN84 100 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 FCN1O00602 326 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 MSMBP08118 114 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 UBE2E1P51965 193 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 HES1Q14469 280 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
LDB3-204ENST00000372066 ZNF562Q6V9R5 426 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 OR1B1Q8NGR6 318 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 RASL11BQ9BPW5 248 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 C1RLQ9NZP8 487 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 HIGD1AQ9Y241 93 aa11.11□□□□□ -0.63
LDB3-204ENST00000372066 ISLRO14498 428 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 GCGP01275 180 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 IGHV3-48P01763 117 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 ORM2P19652 201 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 ZFP36P26651 326 aaKnown RBP11.1□□□□□ -0.63
LDB3-204ENST00000372066 SCGB2A2Q13296 93 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 COX19Q49B96 90 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 ZNF329Q86UD4 541 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 HIST3H2BBQ8N257 126 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 ZNF418Q8TF45 676 aaPredicted RBP11.1□□□□□ -0.63
LDB3-204ENST00000372066 IGF2BP2-AS1Q96M15 143 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 AURKAIP1Q9NWT8 199 aaPredicted RBP11.1□□□□□ -0.63
LDB3-204ENST00000372066 TMEM14CQ9P0S9 112 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 RNF24Q9Y225 148 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 POLR3KQ9Y2Y1 108 aaPredicted RBP11.1□□□□□ -0.63
LDB3-204ENST00000372066 DMRT1Q9Y5R6 373 aa11.1□□□□□ -0.63
LDB3-204ENST00000372066 ARHGAP32A7KAX9 2087 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 A0A0U1RQK1 487 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 ZNF320A2RRD8 509 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 K7EIM0 57 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 PEX7O00628 323 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 TOX4O94842 621 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 PYYP10082 97 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 MYCNOSP40205 109 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 ERVFC1-1P60608 527 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 RPEL1Q2QD12 228 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 TMEM183AQ8IXX5 376 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 ARPC1AQ92747 370 aa11.09□□□□□ -0.63
LDB3-204ENST00000372066 TRBV9A0A0B4J1U6 114 aa11.08□□□□□ -0.64
LDB3-204ENST00000372066 SCGB2A1O75556 95 aa11.08□□□□□ -0.64
LDB3-204ENST00000372066 GP9P14770 177 aa11.08□□□□□ -0.64
LDB3-204ENST00000372066 BRS3P32247 399 aa11.08□□□□□ -0.64
LDB3-204ENST00000372066 YPEL3P61236 119 aaPredicted RBP11.08□□□□□ -0.64
LDB3-204ENST00000372066 RPL15P61313 204 aaKnown RBP11.08□□□□□ -0.64
LDB3-204ENST00000372066 LMO4P61968 165 aa11.08□□□□□ -0.64
LDB3-204ENST00000372066 CHRDL1Q9BU40 450 aa11.08□□□□□ -0.64
LDB3-204ENST00000372066 THYN1Q9P016 225 aa11.08□□□□□ -0.64
LDB3-204ENST00000372066 TRAV20A0A0B4J274 112 aa11.07□□□□□ -0.64
LDB3-204ENST00000372066 TOMM40O96008 361 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms