RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 FBLN7Q53RD9 439 aa22.89■■□□□ 1.26
SSBP3-204ENST00000371320 RBM14Q96PK6 669 aaKnown RBP22.89■■□□□ 1.26
SSBP3-204ENST00000371320 TOMM40O96008 361 aa22.89■■□□□ 1.25
SSBP3-204ENST00000371320 TCRAP04437 139 aa22.89■■□□□ 1.25
SSBP3-204ENST00000371320 PAX1P15863 534 aa22.89■■□□□ 1.25
SSBP3-204ENST00000371320 CDKN1AP38936 164 aa22.89■■□□□ 1.25
SSBP3-204ENST00000371320 CCDC144NLQ6NUI1 221 aa22.89■■□□□ 1.25
SSBP3-204ENST00000371320 COL6A6A6NMZ7 2263 aa22.88■■□□□ 1.25
SSBP3-204ENST00000371320 A0A1W2PPR1 153 aa22.88■■□□□ 1.25
SSBP3-204ENST00000371320 C14orf144Q96I85 54 aa22.88■■□□□ 1.25
SSBP3-204ENST00000371320 NOL4LQ96MY1 436 aaPredicted RBP22.88■■□□□ 1.25
SSBP3-204ENST00000371320 ZNF586Q9NXT0 402 aa22.88■■□□□ 1.25
SSBP3-204ENST00000371320 KIR3DL3Q8N743 410 aa22.88■■□□□ 1.25
SSBP3-204ENST00000371320 TMEM68Q96MH6 324 aa22.88■■□□□ 1.25
SSBP3-204ENST00000371320 OTORQ9NRC9 128 aa22.88■■□□□ 1.25
SSBP3-204ENST00000371320 KLF17Q5JT82 389 aaPredicted RBP22.87■■□□□ 1.25
SSBP3-204ENST00000371320 RASL11AQ6T310 242 aa22.87■■□□□ 1.25
SSBP3-204ENST00000371320 NUP35Q8NFH5 326 aa22.87■■□□□ 1.25
SSBP3-204ENST00000371320 TSKUQ8WUA8 353 aa22.87■■□□□ 1.25
SSBP3-204ENST00000371320 MLST8Q9BVC4 326 aa22.87■■□□□ 1.25
SSBP3-204ENST00000371320 NAGKQ9UJ70 344 aa22.87■■□□□ 1.25
SSBP3-204ENST00000371320 APCSP02743 223 aa22.86■■□□□ 1.25
SSBP3-204ENST00000371320 ZFP36P26651 326 aaKnown RBP22.86■■□□□ 1.25
SSBP3-204ENST00000371320 OR10J3Q5JRS4 329 aa22.86■■□□□ 1.25
SSBP3-204ENST00000371320 UNQ6494/PRO21346Q6UXR6 183 aa22.86■■□□□ 1.25
SSBP3-204ENST00000371320 WIPF2Q8TF74 440 aaPredicted RBP22.86■■□□□ 1.25
SSBP3-204ENST00000371320 BMPR1BO00238 502 aa22.86■■□□□ 1.25
SSBP3-204ENST00000371320 LTAP01374 205 aa22.86■■□□□ 1.25
SSBP3-204ENST00000371320 SAMD10Q9BYL1 202 aa22.86■■□□□ 1.25
SSBP3-204ENST00000371320 REC114Q7Z4M0 266 aa22.85■■□□□ 1.25
SSBP3-204ENST00000371320 DYNAPQ8N1N2 210 aa22.85■■□□□ 1.25
SSBP3-204ENST00000371320 NCBP2LA6PVI3 153 aaKnown RBP22.85■■□□□ 1.25
SSBP3-204ENST00000371320 A8MWP6 167 aa22.85■■□□□ 1.25
SSBP3-204ENST00000371320 NDUFS7O75251 213 aa22.85■■□□□ 1.25
SSBP3-204ENST00000371320 ZNF562Q6V9R5 426 aa22.85■■□□□ 1.25
SSBP3-204ENST00000371320 Q6ZWC4 215 aa22.85■■□□□ 1.25
SSBP3-204ENST00000371320 NEU1Q99519 415 aa22.85■■□□□ 1.25
SSBP3-204ENST00000371320 SHANK2-AS3Q9BTD1 123 aa22.85■■□□□ 1.25
SSBP3-204ENST00000371320 OOSP1A8MZH6 123 aa22.84■■□□□ 1.25
SSBP3-204ENST00000371320 SRIP30626 198 aa22.84■■□□□ 1.25
SSBP3-204ENST00000371320 BRS3P32247 399 aa22.84■■□□□ 1.25
SSBP3-204ENST00000371320 ARPC1AQ92747 370 aa22.84■■□□□ 1.25
SSBP3-204ENST00000371320 HSPB9Q9BQS6 159 aa22.84■■□□□ 1.25
SSBP3-204ENST00000371320 HOXB4P17483 251 aaPredicted RBP22.83■■□□□ 1.25
SSBP3-204ENST00000371320 UBTD1Q9HAC8 227 aa22.83■■□□□ 1.25
SSBP3-204ENST00000371320 NPIPB5A8MRT5 1133 aa22.83■■□□□ 1.24
SSBP3-204ENST00000371320 HIGD1CA8MV81 97 aa22.83■■□□□ 1.24
SSBP3-204ENST00000371320 ZNF253O75346 499 aa22.83■■□□□ 1.24
SSBP3-204ENST00000371320 MINOS1Q5TGZ0 78 aa22.83■■□□□ 1.24
SSBP3-204ENST00000371320 MINOS1-NBL1R4GNA1 71 aa22.83■■□□□ 1.24
SSBP3-204ENST00000371320 BPIFA4PQ86YQ2 179 aa22.82■■□□□ 1.24
SSBP3-204ENST00000371320 EXOC3-AS1Q8N2X6 119 aa22.82■■□□□ 1.24
SSBP3-204ENST00000371320 ZNF491Q8N8L2 437 aa22.82■■□□□ 1.24
SSBP3-204ENST00000371320 RNF125Q96EQ8 232 aa22.82■■□□□ 1.24
SSBP3-204ENST00000371320 S4R3C0 116 aa22.82■■□□□ 1.24
SSBP3-204ENST00000371320 H3BRN7 92 aa22.81■■□□□ 1.24
SSBP3-204ENST00000371320 SFTPCP11686 197 aa22.81■■□□□ 1.24
SSBP3-204ENST00000371320 CD33P20138 364 aa22.81■■□□□ 1.24
SSBP3-204ENST00000371320 SLAQ13239 276 aa22.81■■□□□ 1.24
SSBP3-204ENST00000371320 RPP21Q9H633 154 aaKnown RBP22.81■■□□□ 1.24
SSBP3-204ENST00000371320 GNG7O60262 68 aa22.81■■□□□ 1.24
SSBP3-204ENST00000371320 IL4P05112 153 aa22.81■■□□□ 1.24
SSBP3-204ENST00000371320 LINC00322Q6ZN03 302 aaPredicted RBP22.81■■□□□ 1.24
SSBP3-204ENST00000371320 FANCD2OSQ96PS1 177 aa22.81■■□□□ 1.24
SSBP3-204ENST00000371320 RNF24Q9Y225 148 aa22.81■■□□□ 1.24
SSBP3-204ENST00000371320 IGLV11-55A0A075B6I3 123 aa22.8■■□□□ 1.24
SSBP3-204ENST00000371320 ZNF705FA8MVS1 300 aaPredicted RBP22.8■■□□□ 1.24
SSBP3-204ENST00000371320 ZNF705DP0CH99 300 aaPredicted RBP22.8■■□□□ 1.24
SSBP3-204ENST00000371320 ZNF705BP0CI00 300 aaPredicted RBP22.8■■□□□ 1.24
SSBP3-204ENST00000371320 Q8N6K4 173 aa22.8■■□□□ 1.24
SSBP3-204ENST00000371320 SIGLECL1Q8N7X8 197 aa22.8■■□□□ 1.24
SSBP3-204ENST00000371320 OR4F17Q8NGA8 305 aa22.8■■□□□ 1.24
SSBP3-204ENST00000371320 ZNF492Q9P255 531 aa22.8■■□□□ 1.24
SSBP3-204ENST00000371320 TRAV30A0A087WSZ9 112 aa22.8■■□□□ 1.24
SSBP3-204ENST00000371320 A6NNC1 897 aa22.8■■□□□ 1.24
SSBP3-204ENST00000371320 PRSS22Q9GZN4 317 aa22.8■■□□□ 1.24
SSBP3-204ENST00000371320 NCOR2Q9Y618 2525 aa22.79■■□□□ 1.24
SSBP3-204ENST00000371320 P01737 135 aa22.79■■□□□ 1.24
SSBP3-204ENST00000371320 MFAP4P55083 255 aa22.79■■□□□ 1.24
SSBP3-204ENST00000371320 NDPQ00604 133 aa22.79■■□□□ 1.24
SSBP3-204ENST00000371320 POLR3KQ9Y2Y1 108 aaPredicted RBP22.79■■□□□ 1.24
SSBP3-204ENST00000371320 TRBV19A0A075B6N1 114 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 TOX4O94842 621 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 EBI3Q14213 229 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 GDF5OSQ5U4N7 250 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 GOLT1AQ6ZVE7 132 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 Q86TA4 180 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 LURAP1LQ8IV03 231 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 TTC9CQ8N5M4 171 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 DAZAP1Q96EP5 407 aaKnown RBP22.78■■□□□ 1.24
SSBP3-204ENST00000371320 SIRPDQ9H106 197 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 SPTBN1Q01082 2364 aaKnown RBP22.78■■□□□ 1.24
SSBP3-204ENST00000371320 TRAV8-1A0A0A6YYK1 113 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 WI2-2373I1.2A0A1W2PRP0 233 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 C19orf71A6NCJ1 209 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 GPX1P07203 203 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 TMEM11P17152 192 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 ATP5L2Q7Z4Y8 100 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 KCNS1Q96KK3 526 aa22.78■■□□□ 1.24
SSBP3-204ENST00000371320 RCHY1Q96PM5 261 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms