RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 MLANAQ16655 118 aa11.37□□□□□ -0.59
RPF1-202ENST00000370656 ZNF343Q6P1L6 599 aa11.37□□□□□ -0.59
RPF1-202ENST00000370656 EIF4E3Q8N5X7 224 aaKnown RBP11.37□□□□□ -0.59
RPF1-202ENST00000370656 FANCD2OSQ96PS1 177 aa11.37□□□□□ -0.59
RPF1-202ENST00000370656 MGST2Q99735 147 aa11.37□□□□□ -0.59
RPF1-202ENST00000370656 SLC45A2Q9UMX9 530 aa11.37□□□□□ -0.59
RPF1-202ENST00000370656 IGKV1OR2-108A0A075B7D4 117 aa11.36□□□□□ -0.59
RPF1-202ENST00000370656 TRAV1-1A0A0B4J248 108 aa11.36□□□□□ -0.59
RPF1-202ENST00000370656 ZNF705EA8MWA4 302 aaPredicted RBP11.36□□□□□ -0.59
RPF1-202ENST00000370656 TMEM182Q6ZP80 229 aaPredicted RBP11.36□□□□□ -0.59
RPF1-202ENST00000370656 SLC7A5P1Q8MH63 180 aa11.36□□□□□ -0.59
RPF1-202ENST00000370656 ZNF709Q8N972 641 aa11.36□□□□□ -0.59
RPF1-202ENST00000370656 MBD3L1Q8WWY6 194 aa11.36□□□□□ -0.59
RPF1-202ENST00000370656 SLC35E1Q96K37 410 aa11.36□□□□□ -0.59
RPF1-202ENST00000370656 GGTLC1Q9BX51 225 aa11.36□□□□□ -0.59
RPF1-202ENST00000370656 KCNIP2Q9NS61 270 aa11.36□□□□□ -0.59
RPF1-202ENST00000370656 RPRMQ9NS64 109 aa11.36□□□□□ -0.59
RPF1-202ENST00000370656 K7EIM0 57 aa11.35□□□□□ -0.59
RPF1-202ENST00000370656 AGPAT2O15120 278 aa11.35□□□□□ -0.59
RPF1-202ENST00000370656 LINC00869P0C866 280 aa11.35□□□□□ -0.59
RPF1-202ENST00000370656 HIST1H1BP16401 226 aaKnown RBP11.35□□□□□ -0.59
RPF1-202ENST00000370656 FCGR2BP31994 310 aaPredicted RBP11.35□□□□□ -0.59
RPF1-202ENST00000370656 CAMLGP49069 296 aa11.35□□□□□ -0.59
RPF1-202ENST00000370656 RAB31Q13636 194 aa11.35□□□□□ -0.59
RPF1-202ENST00000370656 AKR1C8PQ5T2L2 129 aa11.35□□□□□ -0.59
RPF1-202ENST00000370656 PXDC1Q5TGL8 231 aa11.35□□□□□ -0.59
RPF1-202ENST00000370656 DYNLRB2Q8TF09 96 aa11.35□□□□□ -0.59
RPF1-202ENST00000370656 PCNPQ8WW12 178 aaKnown RBP11.35□□□□□ -0.59
RPF1-202ENST00000370656 CXorf58Q96LI9 332 aa11.35□□□□□ -0.59
RPF1-202ENST00000370656 SRD5A3Q9H8P0 318 aa11.35□□□□□ -0.59
RPF1-202ENST00000370656 IGKV1D-37A0A075B6S9 117 aa11.34□□□□□ -0.59
RPF1-202ENST00000370656 TRBV9A0A0B4J1U6 114 aa11.34□□□□□ -0.59
RPF1-202ENST00000370656 OR11H12B2RN74 326 aa11.34□□□□□ -0.59
RPF1-202ENST00000370656 CYB5BO43169 146 aa11.34□□□□□ -0.59
RPF1-202ENST00000370656 PMS2P11Q13670 270 aa11.34□□□□□ -0.59
RPF1-202ENST00000370656 TMEM41BQ5BJD5 291 aa11.34□□□□□ -0.59
RPF1-202ENST00000370656 C19orf35Q6ZS72 473 aa11.34□□□□□ -0.59
RPF1-202ENST00000370656 DEFB125Q8N687 156 aa11.34□□□□□ -0.59
RPF1-202ENST00000370656 OR4X1Q8NH49 305 aa11.34□□□□□ -0.59
RPF1-202ENST00000370656 MRPL36Q9P0J6 103 aaKnown RBP11.34□□□□□ -0.59
RPF1-202ENST00000370656 SMCO3A2RU48 225 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 RAB19A4D1S5 217 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 MFSD2BA6NFX1 497 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 YIF1AO95070 293 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 MT-CO2P00403 227 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 TRBV12-3P01733 135 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 APELAP0DMC3 54 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 M6PRP20645 277 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 FHITP49789 147 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 AKR1C1Q04828 323 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 GUCA2BQ16661 112 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 CD300EQ496F6 205 aaPredicted RBP11.33□□□□□ -0.6
RPF1-202ENST00000370656 SPSB3Q6PJ21 355 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 Q6ZRG5 221 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 RPP25LQ8N5L8 163 aaKnown RBP11.33□□□□□ -0.6
RPF1-202ENST00000370656 NPIPB3Q92617 1050 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 TRGV9Q99603 122 aa11.33□□□□□ -0.6
RPF1-202ENST00000370656 LOC100996750A0A140TA64 210 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 CXorf65A6NEN9 183 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 NUPR2A6NF83 97 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 PRH1P02810 166 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 CD7P09564 240 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 DEFA4P12838 97 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 SELENOTP62341 195 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 DEFA5Q01523 94 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 ACOT6Q3I5F7 207 aaPredicted RBP11.32□□□□□ -0.6
RPF1-202ENST00000370656 FFAR4Q5NUL3 377 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 VN1R17PQ8TDU5 208 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 MARC2Q969Z3 335 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 MISP3Q96FF7 219 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 ATP6V0BQ99437 205 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 KRTAP4-6Q9BYQ5 205 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 VSIRQ9H7M9 311 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 THYN1Q9P016 225 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 PFDN2Q9UHV9 154 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 PXMP4Q9Y6I8 212 aa11.32□□□□□ -0.6
RPF1-202ENST00000370656 HERC2O95714 4834 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 ZNF785A8K8V0 405 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 ATP6V1G1O75348 118 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 LORP23490 312 aaPredicted RBP11.31□□□□□ -0.6
RPF1-202ENST00000370656 OR10J1P30954 320 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 RND2P52198 227 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 CYP2G1PQ6ZSU1 146 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 COMMD7Q86VX2 200 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 FAM213BQ8TBF2 198 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 TXN2Q99757 166 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 SCRT1Q9BWW7 348 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 SLC39A9Q9NUM3 307 aa11.31□□□□□ -0.6
RPF1-202ENST00000370656 TECRQ9NZ01 308 aaKnown RBP11.31□□□□□ -0.6
RPF1-202ENST00000370656 FAM223BA6NKX1 122 aa11.3□□□□□ -0.6
RPF1-202ENST00000370656 CLN5O75503 358 aa11.3□□□□□ -0.6
RPF1-202ENST00000370656 H2AFB1P0C5Y9 115 aa11.3□□□□□ -0.6
RPF1-202ENST00000370656 PLP1P60201 277 aa11.3□□□□□ -0.6
RPF1-202ENST00000370656 RAB2AP61019 212 aa11.3□□□□□ -0.6
RPF1-202ENST00000370656 B2MP61769 119 aa11.3□□□□□ -0.6
RPF1-202ENST00000370656 ATP5G2Q06055 141 aa11.3□□□□□ -0.6
RPF1-202ENST00000370656 DEFB114Q30KQ6 69 aa11.3□□□□□ -0.6
RPF1-202ENST00000370656 FAM209BQ5JX69 171 aa11.3□□□□□ -0.6
RPF1-202ENST00000370656 MIC13Q5XKP0 118 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms