RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 A0A0D9SG52 128 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 J3KT08 172 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 BUB3O43684 328 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 PPYP01298 95 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 ZNF57Q68EA5 555 aaPredicted RBP2.99□□□□□ -1.93
MCF2-203ENST00000370576 KRTAP1-3Q8IUG1 177 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 DEFB125Q8N687 156 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 DOK5Q9P104 306 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 LINC00312Q9Y6C7 94 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 DYNC2H1Q8NCM8 4307 aaKnown RBP2.99□□□□□ -1.93
MCF2-203ENST00000370576 LOC107984640A0A0U1RRK4 108 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 C20orf202A1L168 122 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 C16orf97H3BN30 126 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 MGST3O14880 152 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 BCL2L11O43521 198 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 CA2P00918 260 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 IGHV3-9P01782 118 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 PATE4P0C8F1 98 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 HKR1P10072 659 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 VDAC2P45880 294 aaPredicted RBP2.99□□□□□ -1.93
MCF2-203ENST00000370576 AKR1D1P51857 326 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 TPTE2P1Q5T6R2 138 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 C6orf201Q7Z4U5 140 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 ARPC1AQ92747 370 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 BORCS8Q96FH0 119 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 ADAT1Q9BUB4 502 aaKnown RBP2.99□□□□□ -1.93
MCF2-203ENST00000370576 C1QTNF4Q9BXJ3 329 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 TTTY10Q9BZA0 68 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 RERGLQ9H628 205 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 PLEKHF2Q9H8W4 249 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 RBM12B-AS1Q9P1G2 102 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 MDFICQ9P1T7 246 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 ARL2-SNX15V9GYD0 113 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 RIF1Q5UIP0 2472 aaKnown RBP2.99□□□□□ -1.93
MCF2-203ENST00000370576 SPTBN4Q9H254 2564 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 NDUFA3O95167 84 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 IGKV1-5P01602 117 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 FAM106CPP0CH98 169 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 PTHLHP12272 177 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 GNB2P62879 340 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 RPL24P83731 157 aaKnown RBP2.99□□□□□ -1.93
MCF2-203ENST00000370576 CYCSP99999 105 aaKnown RBP2.99□□□□□ -1.93
MCF2-203ENST00000370576 SMAGPQ0VAQ4 97 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 KLF17Q5JT82 389 aaPredicted RBP2.99□□□□□ -1.93
MCF2-203ENST00000370576 C12orf54Q6X4T0 127 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 NPBQ8NG41 125 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 OR1N2Q8NGR9 330 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 CHCHD10Q8WYQ3 142 aaPredicted RBP2.99□□□□□ -1.93
MCF2-203ENST00000370576 CCL17Q92583 94 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 MALSU1Q96EH3 234 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 LINC00052Q96N35 136 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 SELENOIQ9C0D9 397 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 ZNF286AQ9HBT8 521 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 TMEM14BQ9NUH8 114 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 PKD1L2Q7Z442 2459 aa2.99□□□□□ -1.93
MCF2-203ENST00000370576 TRAV4A0A0B4J268 109 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 ZNF728P0DKX0 622 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 PIGPP57054 158 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 ARL16Q0P5N6 197 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 ZNF818PQ6ZRF7 136 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 PPP1R27Q86WC6 154 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 ZNF843Q8N446 348 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 BORCS7Q96B45 105 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 GINS4Q9BRT9 223 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 SMDT1Q9H4I9 107 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 IL36RNQ9UBH0 155 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 PIEZO2Q9H5I5 2752 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 A0A1W2PPR1 153 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 TMEM30CPA0ZSE6 113 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 C12orf77C9JDV5 145 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 FAM229AH3BQW9 127 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 M0R1W7 72 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 LDLRAD2Q5SZI1 272 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 HEPN1Q6WQI6 88 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 LRP11Q86VZ4 500 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 TMEM219Q86XT9 240 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 GBGT1Q8N5D6 347 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 ZNF502Q8TBZ5 544 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 TP53RKQ96S44 253 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 C19orf24Q9BVV8 132 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 ASF1BQ9NVP2 202 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 RPUSD1Q9UJJ7 312 aaKnown RBP2.98□□□□□ -1.93
MCF2-203ENST00000370576 POLR1DQ9Y2S0 133 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 F5H5P2 479 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 AMTP48728 403 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 GPM6AP51674 278 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 RND2P52198 227 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 UBA52P62987 128 aaKnown RBP2.98□□□□□ -1.93
MCF2-203ENST00000370576 C12orf74Q32Q52 190 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 PRR30Q53SZ7 412 aaPredicted RBP2.98□□□□□ -1.93
MCF2-203ENST00000370576 UFSP1Q6NVU6 142 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 Q6ZSN1 163 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 PRR15Q8IV56 129 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 OR1J1Q8NGS3 322 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 OR1L1Q8NH94 360 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 ARL11Q969Q4 196 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 PSMG3Q9BT73 122 aaPredicted RBP2.98□□□□□ -1.93
MCF2-203ENST00000370576 ENY2Q9NPA8 101 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 CTSZQ9UBR2 303 aa2.98□□□□□ -1.93
MCF2-203ENST00000370576 C14orf166Q9Y224 244 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms