RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 OR5D13Q8NGL4 314 aa5.53□□□□□ -1.52
CSDE1-204ENST00000369530 ZNF502Q8TBZ5 544 aa5.53□□□□□ -1.52
CSDE1-204ENST00000369530 TMEM70Q9BUB7 260 aa5.53□□□□□ -1.52
CSDE1-204ENST00000369530 SS18L2Q9UHA2 77 aa5.53□□□□□ -1.52
CSDE1-204ENST00000369530 NAT8BQ9UHF3 227 aa5.53□□□□□ -1.52
CSDE1-204ENST00000369530 TEP1Q99973 2627 aaKnown RBP5.53□□□□□ -1.52
CSDE1-204ENST00000369530 DNAH11Q96DT5 4516 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 TRBV20OR9-2A0A075B6H5 130 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 IGKV1-12A0A0C4DH73 117 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 MDFIC2A0A1B0GVS7 189 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 PHF1O43189 567 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-204ENST00000369530 SSSCA1O60232 199 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 PDCD6O75340 191 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 IGKV1D-12P01611 117 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 ATP5IP56385 69 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-204ENST00000369530 RNF183Q96D59 192 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 C5orf30Q96GV9 206 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 KCNS2Q9ULS6 477 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-204ENST00000369530 C3orf85A0A1B0GTC6 90 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 AMY1AP04745 511 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 PSG7Q13046 419 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 CR1LQ2VPA4 569 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 C5orf47Q569G3 176 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 LCN12Q6JVE5 192 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 ZNF114Q8NC26 417 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 TAF15Q92804 592 aaKnown RBP eCLIP5.52□□□□□ -1.53
CSDE1-204ENST00000369530 Q96M66 194 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 RTL8AQ9BWD3 113 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 FNDC4Q9H6D8 234 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-204ENST00000369530 KMT2AQ03164 3969 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 A0A1B0GW15 77 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 SMIM27A0A1W2PRY6 76 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 CRLF1O75462 422 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 AVPP01185 164 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 CT45A6P0DMU7 189 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 CT45A5P0DMU8 189 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 CT45A7P0DMV0 189 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 EFNA4P52798 201 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 CLEC12BQ2HXU8 276 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 CT45A1Q5HYN5 189 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 CXorf66Q5JRM2 361 aaPredicted RBP5.52□□□□□ -1.53
CSDE1-204ENST00000369530 OR1L1Q8NH94 360 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 CT45A3Q8NHU0 189 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 SCGB1C1Q8TD33 95 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 FAM103A1Q9BTL3 118 aaKnown RBP5.52□□□□□ -1.53
CSDE1-204ENST00000369530 SLC39A9Q9NUM3 307 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 KAAG1Q9UBP8 84 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 PRO0461Q9UI25 63 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 CYSLTR1Q9Y271 337 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 ZNF257Q9Y2Q1 563 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 OR2W1Q9Y3N9 320 aa5.52□□□□□ -1.53
CSDE1-204ENST00000369530 TRAV25A0A0B4J276 109 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 CENPVL3A0A0U1RRI6 287 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 SNURFLB1AK76 121 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 TNFSF12O43508 249 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 IGHV1-46P01743 117 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 DSCR9P59020 149 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 RPEL1Q2QD12 228 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 GAPTQ8N292 157 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 GPHA2Q96T91 129 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 SPAG8Q99932 426 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-204ENST00000369530 HSPB8Q9UJY1 196 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 OR4C46A6NHA9 309 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 C15orf65H3BRN8 121 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 RAB29O14966 203 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 CST7O76096 145 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 NXPH3O95157 252 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 CRYAAP02489 173 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 NHLRC4P0CG21 123 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-204ENST00000369530 AREGP15514 252 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 USF1P22415 310 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-204ENST00000369530 RBM11P57052 281 aaKnown RBP5.51□□□□□ -1.53
CSDE1-204ENST00000369530 KLF17Q5JT82 389 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-204ENST00000369530 ZNF826PQ6ZT77 177 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 PIFOQ8TCI5 191 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 TM2D2Q9BX73 214 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 OR1A1Q9P1Q5 309 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 SPCS1Q9Y6A9 102 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 TRGV10A0A0A0MS01 117 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 SYS1-DBNDD2H3BUS1 97 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 CHST1O43916 411 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 ARL3P36405 182 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 PAX8Q06710 450 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 EDDM3AQ14507 147 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 ZNF718Q3SXZ3 478 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 LINC01545Q5VT33 79 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 ADAMTSL5Q6ZMM2 481 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 OR4A16Q8NH70 328 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 PHLDA1Q8WV24 401 aaPredicted RBP5.51□□□□□ -1.53
CSDE1-204ENST00000369530 CHCHD1Q96BP2 118 aaKnown RBP5.51□□□□□ -1.53
CSDE1-204ENST00000369530 VGLL1Q99990 258 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 NDFIP1Q9BT67 221 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 C1QTNF4Q9BXJ3 329 aa5.51□□□□□ -1.53
CSDE1-204ENST00000369530 FN1P02751 2386 aaKnown RBP5.5□□□□□ -1.53
CSDE1-204ENST00000369530 MYO9AB2RTY4 2548 aa5.5□□□□□ -1.53
CSDE1-204ENST00000369530 C11orf94C9JXX5 98 aa5.5□□□□□ -1.53
CSDE1-204ENST00000369530 SERPINE2P07093 398 aa5.5□□□□□ -1.53
CSDE1-204ENST00000369530 OR5AL1P0C617 328 aa5.5□□□□□ -1.53
CSDE1-204ENST00000369530 PMCHP20382 165 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms