RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ANKRD34BA5PLL1 514 aa18.46■□□□□ 0.55
SNX3-203ENST00000368979 C9JQL5 133 aa18.46■□□□□ 0.55
SNX3-203ENST00000368979 GCHFRP30047 84 aa18.46■□□□□ 0.55
SNX3-203ENST00000368979 ICAM4Q14773 271 aa18.46■□□□□ 0.55
SNX3-203ENST00000368979 USF2Q15853 346 aaPredicted RBP18.46■□□□□ 0.55
SNX3-203ENST00000368979 IQCF2Q8IXL9 164 aa18.46■□□□□ 0.55
SNX3-203ENST00000368979 JMJD8Q96S16 334 aa18.46■□□□□ 0.55
SNX3-203ENST00000368979 MANBALQ9NQG1 85 aa18.46■□□□□ 0.55
SNX3-203ENST00000368979 HIVEP2P31629 2446 aa18.46■□□□□ 0.55
SNX3-203ENST00000368979 IGHV3-11P01762 117 aa18.45■□□□□ 0.54
SNX3-203ENST00000368979 PPT1P50897 306 aa18.45■□□□□ 0.54
SNX3-203ENST00000368979 OR5AU1Q8NGC0 362 aa18.45■□□□□ 0.54
SNX3-203ENST00000368979 SLC25A39Q9BZJ4 359 aaPredicted RBP18.45■□□□□ 0.54
SNX3-203ENST00000368979 SMDT1Q9H4I9 107 aa18.45■□□□□ 0.54
SNX3-203ENST00000368979 GNB4Q9HAV0 340 aa18.45■□□□□ 0.54
SNX3-203ENST00000368979 PPP5D1E7EU14 171 aa18.44■□□□□ 0.54
SNX3-203ENST00000368979 ARL3P36405 182 aa18.44■□□□□ 0.54
SNX3-203ENST00000368979 OR4X2Q8NGF9 303 aa18.44■□□□□ 0.54
SNX3-203ENST00000368979 ZFAND3Q9H8U3 227 aa18.44■□□□□ 0.54
SNX3-203ENST00000368979 TMEM218A2RU14 115 aa18.44■□□□□ 0.54
SNX3-203ENST00000368979 H3BRN7 92 aa18.44■□□□□ 0.54
SNX3-203ENST00000368979 OR7C2O60412 319 aa18.44■□□□□ 0.54
SNX3-203ENST00000368979 TRBV12-3P01733 135 aa18.44■□□□□ 0.54
SNX3-203ENST00000368979 RPLP1P05386 114 aaKnown RBP18.44■□□□□ 0.54
SNX3-203ENST00000368979 CRYBA1P05813 215 aa18.44■□□□□ 0.54
SNX3-203ENST00000368979 RELQ04864 619 aaPredicted RBP18.44■□□□□ 0.54
SNX3-203ENST00000368979 LINC00052Q96N35 136 aa18.44■□□□□ 0.54
SNX3-203ENST00000368979 F8P00451 2351 aa18.43■□□□□ 0.54
SNX3-203ENST00000368979 KRBOX1C9JBD0 128 aa18.43■□□□□ 0.54
SNX3-203ENST00000368979 CRLF1O75462 422 aa18.43■□□□□ 0.54
SNX3-203ENST00000368979 ZP3P21754 424 aa18.43■□□□□ 0.54
SNX3-203ENST00000368979 TAGLN2P37802 199 aaKnown RBP18.43■□□□□ 0.54
SNX3-203ENST00000368979 TOMM20LQ6UXN7 152 aa18.43■□□□□ 0.54
SNX3-203ENST00000368979 SUN5Q8TC36 379 aa18.43■□□□□ 0.54
SNX3-203ENST00000368979 RXFP4Q8TDU9 374 aa18.43■□□□□ 0.54
SNX3-203ENST00000368979 NARS2Q96I59 477 aaKnown RBP18.43■□□□□ 0.54
SNX3-203ENST00000368979 SHANK2-AS3Q9BTD1 123 aa18.43■□□□□ 0.54
SNX3-203ENST00000368979 VAX2Q9UIW0 290 aa18.43■□□□□ 0.54
SNX3-203ENST00000368979 IGHV3-35A0A0C4DH35 117 aa18.42■□□□□ 0.54
SNX3-203ENST00000368979 HSPB1P04792 205 aaKnown RBP18.42■□□□□ 0.54
SNX3-203ENST00000368979 FAM209BQ5JX69 171 aa18.42■□□□□ 0.54
SNX3-203ENST00000368979 KLHDC1Q8N7A1 406 aa18.42■□□□□ 0.54
SNX3-203ENST00000368979 C16orf95Q9H693 158 aa18.42■□□□□ 0.54
SNX3-203ENST00000368979 TMEM167BQ9NRX6 74 aa18.42■□□□□ 0.54
SNX3-203ENST00000368979 OR51M1Q9H341 326 aa18.41■□□□□ 0.54
SNX3-203ENST00000368979 HIVEP1P15822 2718 aa18.41■□□□□ 0.54
SNX3-203ENST00000368979 BMPR1BO00238 502 aa18.4■□□□□ 0.54
SNX3-203ENST00000368979 PAGE4O60829 102 aa18.4■□□□□ 0.54
SNX3-203ENST00000368979 STXBP6Q8NFX7 210 aa18.4■□□□□ 0.54
SNX3-203ENST00000368979 PAXXQ9BUH6 204 aa18.4■□□□□ 0.54
SNX3-203ENST00000368979 SRP19P09132 144 aaKnown RBP18.39■□□□□ 0.54
SNX3-203ENST00000368979 OR10J4P0C629 311 aa18.39■□□□□ 0.54
SNX3-203ENST00000368979 SFTA3P0C7M3 94 aa18.39■□□□□ 0.54
SNX3-203ENST00000368979 PYYP10082 97 aa18.39■□□□□ 0.54
SNX3-203ENST00000368979 ADCYAP1P18509 176 aa18.39■□□□□ 0.54
SNX3-203ENST00000368979 MEF2BQ02080 365 aaPredicted RBP18.39■□□□□ 0.54
SNX3-203ENST00000368979 LEMD1Q68G75 181 aa18.39■□□□□ 0.54
SNX3-203ENST00000368979 S100A7AQ86SG5 101 aa18.39■□□□□ 0.54
SNX3-203ENST00000368979 WIPF2Q8TF74 440 aaPredicted RBP18.39■□□□□ 0.54
SNX3-203ENST00000368979 RABAC1Q9UI14 185 aa18.39■□□□□ 0.54
SNX3-203ENST00000368979 GP9P14770 177 aa18.39■□□□□ 0.53
SNX3-203ENST00000368979 UBE2L3P68036 154 aaKnown RBP18.39■□□□□ 0.53
SNX3-203ENST00000368979 FXYD5Q96DB9 178 aa18.39■□□□□ 0.53
SNX3-203ENST00000368979 UBE2E2Q96LR5 201 aa18.39■□□□□ 0.53
SNX3-203ENST00000368979 SLC35B3Q9H1N7 401 aa18.39■□□□□ 0.53
SNX3-203ENST00000368979 PEF1Q9UBV8 284 aaKnown RBP18.39■□□□□ 0.53
SNX3-203ENST00000368979 ARL2-SNX15V9GYD0 113 aa18.39■□□□□ 0.53
SNX3-203ENST00000368979 NDUFS6O75380 124 aaKnown RBP18.38■□□□□ 0.53
SNX3-203ENST00000368979 CD81P60033 236 aa18.38■□□□□ 0.53
SNX3-203ENST00000368979 UBE2G2P60604 165 aa18.38■□□□□ 0.53
SNX3-203ENST00000368979 TMEM14CQ9P0S9 112 aa18.38■□□□□ 0.53
SNX3-203ENST00000368979 CLPSL1A2RUU4 121 aa18.37■□□□□ 0.53
SNX3-203ENST00000368979 ZNF98A6NK75 572 aa18.37■□□□□ 0.53
SNX3-203ENST00000368979 NDUFA4O00483 81 aa18.37■□□□□ 0.53
SNX3-203ENST00000368979 TCF21O43680 179 aa18.37■□□□□ 0.53
SNX3-203ENST00000368979 GGCTO75223 188 aaKnown RBP18.37■□□□□ 0.53
SNX3-203ENST00000368979 NDUFA7O95182 113 aa18.37■□□□□ 0.53
SNX3-203ENST00000368979 LGALS1P09382 135 aaKnown RBP18.37■□□□□ 0.53
SNX3-203ENST00000368979 LINC01006Q8NI28 216 aa18.37■□□□□ 0.53
SNX3-203ENST00000368979 OR5B12Q96R08 314 aa18.37■□□□□ 0.53
SNX3-203ENST00000368979 YTHDF2Q9Y5A9 579 aaKnown RBP18.37■□□□□ 0.53
SNX3-203ENST00000368979 IGHV3OR16-8A0A075B7F1 116 aa18.36■□□□□ 0.53
SNX3-203ENST00000368979 FAM74A7A6NL05 159 aa18.36■□□□□ 0.53
SNX3-203ENST00000368979 C10orf91Q5T1B1 145 aa18.36■□□□□ 0.53
SNX3-203ENST00000368979 CUBNO60494 3623 aa18.36■□□□□ 0.53
SNX3-203ENST00000368979 ATP5G3P48201 142 aa18.35■□□□□ 0.53
SNX3-203ENST00000368979 TCTEX1D4Q5JR98 221 aa18.35■□□□□ 0.53
SNX3-203ENST00000368979 TXNDC17Q9BRA2 123 aa18.35■□□□□ 0.53
SNX3-203ENST00000368979 SEC11CQ9BY50 192 aa18.35■□□□□ 0.53
SNX3-203ENST00000368979 MTORP42345 2549 aa18.34■□□□□ 0.53
SNX3-203ENST00000368979 C11orf94C9JXX5 98 aa18.34■□□□□ 0.53
SNX3-203ENST00000368979 F8W036 122 aa18.34■□□□□ 0.53
SNX3-203ENST00000368979 S100A7P31151 101 aa18.34■□□□□ 0.53
SNX3-203ENST00000368979 MRPS12O15235 138 aaKnown RBP18.33■□□□□ 0.53
SNX3-203ENST00000368979 CST9LP1Q5W188 147 aa18.33■□□□□ 0.53
SNX3-203ENST00000368979 UNQ9165/PRO28630Q6UXU0 137 aa18.33■□□□□ 0.53
SNX3-203ENST00000368979 BPIFA4PQ86YQ2 179 aa18.33■□□□□ 0.53
SNX3-203ENST00000368979 CYB561D1Q8N8Q1 229 aa18.33■□□□□ 0.53
SNX3-203ENST00000368979 RNF24Q9Y225 148 aa18.33■□□□□ 0.53
SNX3-203ENST00000368979 CARHSP1Q9Y2V2 147 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms