RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 ZNF492Q9P255 531 aa13.75□□□□□ -0.21
NID1-202ENST00000366595 APC2O95996 2303 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 A0A0A6YYD4 124 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 OR11H6Q8NGC7 330 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 LY75O60449 1722 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 BTAF1O14981 1849 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 TRAV13-1A0A0B4J241 112 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 SRRM5B3KS81 715 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 NDUFS6O75380 124 aaKnown RBP13.74□□□□□ -0.21
NID1-202ENST00000366595 SRD5A1P18405 259 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 FOXF2Q12947 444 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 MRPL14Q6P1L8 145 aaKnown RBP13.74□□□□□ -0.21
NID1-202ENST00000366595 BMPERQ8N8U9 685 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 C9orf106Q8NAJ2 232 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 PSCAO43653 123 aa13.74□□□□□ -0.21
NID1-202ENST00000366595 RPL15P61313 204 aaKnown RBP13.74□□□□□ -0.21
NID1-202ENST00000366595 TSSC4Q9Y5U2 329 aaPredicted RBP13.74□□□□□ -0.21
NID1-202ENST00000366595 ZNF837Q96EG3 531 aaPredicted RBP13.73□□□□□ -0.21
NID1-202ENST00000366595 ATP6V0BQ99437 205 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 CABIN1Q9Y6J0 2220 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 IGHV2-26A0A0B4J1V2 119 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 IGHV1-24A0A0C4DH33 117 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 ZNF114Q8NC26 417 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 TRBV6-6A0A0A6YYG2 114 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 CEACAM8P31997 349 aaPredicted RBP13.73□□□□□ -0.21
NID1-202ENST00000366595 TAL2Q16559 108 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 SCN4AP35499 1836 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 HEATR5BQ9P2D3 2071 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 Q86TA4 180 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 MMP23AO75900 390 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 IL17RELQ6ZVW7 336 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 BOD1L2Q8IYS8 172 aa13.73□□□□□ -0.21
NID1-202ENST00000366595 IGKV1D-8A0A087WSZ0 117 aa13.72□□□□□ -0.21
NID1-202ENST00000366595 FAM223BA6NKX1 122 aa13.72□□□□□ -0.21
NID1-202ENST00000366595 EREGO14944 169 aa13.72□□□□□ -0.21
NID1-202ENST00000366595 FAM223AQ8IWN6 122 aa13.72□□□□□ -0.21
NID1-202ENST00000366595 DICER1Q9UPY3 1922 aaKnown RBP13.72□□□□□ -0.21
NID1-202ENST00000366595 SCN7AQ01118 1682 aa13.72□□□□□ -0.21
NID1-202ENST00000366595 K7EP34 96 aa13.72□□□□□ -0.21
NID1-202ENST00000366595 CRYGSP22914 178 aa13.72□□□□□ -0.21
NID1-202ENST00000366595 SUPT4H1P63272 117 aaKnown RBP13.72□□□□□ -0.21
NID1-202ENST00000366595 IGLV3-12A0A075B6K2 115 aa13.72□□□□□ -0.21
NID1-202ENST00000366595 AMN1Q8IY45 258 aa13.72□□□□□ -0.21
NID1-202ENST00000366595 ANKRD31Q8N7Z5 1873 aa13.72□□□□□ -0.21
NID1-202ENST00000366595 TRAV40A0A0B4J280 105 aa13.71□□□□□ -0.21
NID1-202ENST00000366595 TCF15Q12870 199 aa13.71□□□□□ -0.21
NID1-202ENST00000366595 ECM29Q5VYK3 1845 aa13.71□□□□□ -0.21
NID1-202ENST00000366595 IGHV3-73A0A0B4J1V6 119 aa13.71□□□□□ -0.21
NID1-202ENST00000366595 NABP1Q96AH0 204 aa13.71□□□□□ -0.21
NID1-202ENST00000366595 SAP30O75446 220 aa13.71□□□□□ -0.21
NID1-202ENST00000366595 HAMPP81172 84 aa13.71□□□□□ -0.21
NID1-202ENST00000366595 PAPPAQ13219 1627 aa13.71□□□□□ -0.22
NID1-202ENST00000366595 IGHV1-3A0A0C4DH29 117 aa13.71□□□□□ -0.22
NID1-202ENST00000366595 LYL1P12980 280 aa13.71□□□□□ -0.22
NID1-202ENST00000366595 POLR3KQ9Y2Y1 108 aaPredicted RBP13.71□□□□□ -0.22
NID1-202ENST00000366595 GAGE1Q13065 139 aa13.7□□□□□ -0.22
NID1-202ENST00000366595 ZNF329Q86UD4 541 aa13.7□□□□□ -0.22
NID1-202ENST00000366595 MIA3Q5JRA6 1907 aa13.7□□□□□ -0.22
NID1-202ENST00000366595 IGHV1-8P0DP01 117 aa13.7□□□□□ -0.22
NID1-202ENST00000366595 CDKN1AP38936 164 aa13.7□□□□□ -0.22
NID1-202ENST00000366595 IGHV1-46P01743 117 aa13.7□□□□□ -0.22
NID1-202ENST00000366595 Q8N8P6 123 aa13.7□□□□□ -0.22
NID1-202ENST00000366595 IGKV1-5P01602 117 aa13.7□□□□□ -0.22
NID1-202ENST00000366595 IGHG3P01860 377 aa13.7□□□□□ -0.22
NID1-202ENST00000366595 QSER1Q2KHR3 1735 aa13.7□□□□□ -0.22
NID1-202ENST00000366595 FXYD7P58549 80 aa13.69□□□□□ -0.22
NID1-202ENST00000366595 K7EP13 123 aa13.69□□□□□ -0.22
NID1-202ENST00000366595 IGHV1-18A0A0C4DH31 117 aa13.69□□□□□ -0.22
NID1-202ENST00000366595 CD24P25063 80 aa13.69□□□□□ -0.22
NID1-202ENST00000366595 GFI1Q99684 422 aa13.69□□□□□ -0.22
NID1-202ENST00000366595 KLHDC3Q9BQ90 382 aa13.69□□□□□ -0.22
NID1-202ENST00000366595 BCORQ6W2J9 1755 aa13.69□□□□□ -0.22
NID1-202ENST00000366595 C5orf64Q2M2E5 130 aa13.69□□□□□ -0.22
NID1-202ENST00000366595 WFDC12Q8WWY7 111 aa13.69□□□□□ -0.22
NID1-202ENST00000366595 RNF166Q96A37 237 aaPredicted RBP13.69□□□□□ -0.22
NID1-202ENST00000366595 DSCR8Q96T75 97 aa13.69□□□□□ -0.22
NID1-202ENST00000366595 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.68□□□□□ -0.22
NID1-202ENST00000366595 GAGE12JA6NER3 117 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 GAGE7O76087 117 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 GAGE12FP0CL80 117 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 GAGE12GP0CL81 117 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 GAGE12IP0CL82 117 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 GAGE4Q13068 117 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 C10orf55Q5SWW7 151 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 TMEM75Q8N9X5 138 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 PRSS46E5RG02 174 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 TGFBR3LH3BV60 316 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 M0R1W7 72 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 Q6ZS49 121 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 LYPD3O95274 346 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 CSRP2Q16527 193 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 STPG4Q8N801 248 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 Q8TAT8 98 aa13.68□□□□□ -0.22
NID1-202ENST00000366595 ARAP2Q8WZ64 1704 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 IGKV1-12A0A0C4DH73 117 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 IGKV1D-12P01611 117 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 NKAPP1Q8N9T2 125 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 SELENOKQ9Y6D0 94 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 TRAV13-2A0A0B4J235 113 aa13.67□□□□□ -0.22
NID1-202ENST00000366595 FCN3O75636 299 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms