RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 H3BRM9 83 aa0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 KLF7O75840 302 aaPredicted RBP0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 RPS17P08708 135 aaKnown RBP0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 ERP29P30040 261 aaKnown RBP0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 SPINK9Q5DT21 86 aa0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 C22orf39Q6P5X5 142 aa0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 PSMF1Q92530 271 aa0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 PPP1R14BQ96C90 147 aa0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 SLC25A21Q9BQT8 299 aaPredicted RBP0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 IMUPQ9GZP8 106 aa0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 TMEM133Q9H2Q1 129 aa0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 PARVGQ9HBI0 331 aa0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 UQCC1Q9NVA1 299 aa0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 PLXNA4Q9HCM2 1894 aa0.3□□□□□ -2.36
RNU6-428P-201ENST00000362942 TRAV10A0A0B4J240 114 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 C17orf112F2Z3M2 114 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 NDUFB3O43676 98 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 GGCTO75223 188 aaKnown RBP0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 ERC2-IT1O76042 136 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 LYPLA2O95372 231 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 RNASE4P34096 147 aaKnown RBP0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 PIGPP57054 158 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 RANP62826 216 aaKnown RBP0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 RRN3P1Q2M238 152 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 ZNF833PQ6ZTB9 187 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 PDZD9Q8IXQ8 264 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 OR52L1Q8NGH7 329 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 OR5D14Q8NGL3 314 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 LYSMD1Q96S90 227 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 RNASE7Q9H1E1 156 aaKnown RBP0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 NMNAT1Q9HAN9 279 aaPredicted RBP0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 PARVBQ9HBI1 364 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 TMEM138Q9NPI0 162 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 PCTPQ9UKL6 214 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 CHD3Q12873 2000 aaKnown RBP0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 PLB1Q6P1J6 1458 aa0.29□□□□□ -2.36
RNU6-428P-201ENST00000362942 UBR2Q8IWV8 1755 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 TRBV19A0A075B6N1 114 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 E7EUB6 86 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 F8W1H4 67 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 OR7C1O76099 320 aaPredicted RBP0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 HAND1O96004 215 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 IFNA7P01567 189 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 COX7CP15954 63 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 HOXA6P31267 233 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 DSCR4P56555 118 aaPredicted RBP0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 MYL6P60660 151 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 AKIRIN2Q53H80 203 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 KRTAP26-1Q6PEX3 210 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 GRINAQ7Z429 371 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 Q8IYB0 196 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 EXOC3-AS1Q8N2X6 119 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 OR11H6Q8NGC7 330 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 OR8J2Q8NGG1 315 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 OR10K1Q8NGX5 313 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 PBOV1Q9GZY1 135 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 TMEM126AQ9H061 195 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 PSTPIP2Q9H939 334 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 MYLKQ15746 1914 aa0.28□□□□□ -2.36
RNU6-428P-201ENST00000362942 MDN1Q9NU22 5596 aa0.28□□□□□ -2.37
RNU6-428P-201ENST00000362942 SCN8AQ9UQD0 1980 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 MYO18AQ92614 2054 aaKnown RBP0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 TCRBP04435 133 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 CD2P06729 351 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 OR10J4P0C629 311 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 SRIP30626 198 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 FXYD6P3P58550 94 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 CDK6Q00534 326 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 EIF5AL1Q6IS14 154 aaKnown RBP0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 MUCL1Q96DR8 90 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 SIGMAR1Q99720 223 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 PLAC8Q9NZF1 115 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 HSPB8Q9UJY1 196 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 SLC22A13Q9Y226 551 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 RNF11Q9Y3C5 154 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 CECR2Q9BXF3 1484 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 ARHGEF11O15085 1522 aa0.27□□□□□ -2.37
RNU6-428P-201ENST00000362942 PTPRFP10586 1907 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 TRAV4A0A0B4J268 109 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 FAM159BA6NKW6 160 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 PHGR1C9JFL3 82 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 CXCL8P10145 99 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 CDKN2CP42773 168 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 ROMO1P60602 79 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 LSM6P62312 80 aaKnown RBP0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 UBE2BP63146 152 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 ITGB3BPQ13352 177 aaPredicted RBP0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 LIN52Q52LA3 116 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 Q6ZS92 163 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 OR10AG1Q8NH19 301 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 TEX37Q96LM6 180 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 PARD6GQ9BYG4 376 aaPredicted RBP0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 OR52A1Q9UKL2 312 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 CITO14578 2027 aa0.26□□□□□ -2.37
RNU6-428P-201ENST00000362942 HEATR1Q9H583 2144 aaKnown RBP0.25□□□□□ -2.37
RNU6-428P-201ENST00000362942 PHRF1Q9P1Y6 1649 aaKnown RBP0.25□□□□□ -2.37
RNU6-428P-201ENST00000362942 MACF1Q9UPN3 7388 aaKnown RBP0.25□□□□□ -2.37
RNU6-428P-201ENST00000362942 TMEM114B3SHH9 223 aa0.25□□□□□ -2.37
RNU6-428P-201ENST00000362942 M0R233 179 aa0.25□□□□□ -2.37
RNU6-428P-201ENST00000362942 DEFA3P59666 94 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms