RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 hADV38S2A0JD32 116 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 PROP1O75360 226 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 ZNF134P52741 427 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 ZNF146Q15072 292 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 FAM120AOSQ5T036 256 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 PRNTQ86SH4 94 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 CD177Q8N6Q3 437 aa10.32□□□□□ -0.76
VAMP1-201ENST00000361716 MOSP00540 346 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 FCGR2BP31994 310 aaPredicted RBP10.31□□□□□ -0.76
VAMP1-201ENST00000361716 SSBP2P81877 361 aaPredicted RBP10.31□□□□□ -0.76
VAMP1-201ENST00000361716 NPIPB3Q92617 1050 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 RPP21Q9H633 154 aaKnown RBP10.31□□□□□ -0.76
VAMP1-201ENST00000361716 C1RLQ9NZP8 487 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 SPRR3Q9UBC9 169 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 IGKV3D-15A0A087WSY6 115 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 A0A1W2PPM0 123 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 PRR20EP86478 221 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 PRR20CP86479 221 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 PRR20DP86480 221 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 PRR20BP86481 221 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 PRR20AP86496 221 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 KLF5Q13887 457 aaPredicted RBP10.31□□□□□ -0.76
VAMP1-201ENST00000361716 AMTNQ6UX39 209 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 ATP6V0BQ99437 205 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 CREBBPQ92793 2442 aa10.31□□□□□ -0.76
VAMP1-201ENST00000361716 C9orf172C9J069 976 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.3□□□□□ -0.76
VAMP1-201ENST00000361716 H3BRM9 83 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 FAM106CPP0CH98 169 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 FAM106AQ4KMX7 169 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 C10orf55Q5SWW7 151 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 PEAR1Q5VY43 1037 aaPredicted RBP10.3□□□□□ -0.76
VAMP1-201ENST00000361716 HCP5Q6MZN7 132 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 LINC00322Q6ZN03 302 aaPredicted RBP10.3□□□□□ -0.76
VAMP1-201ENST00000361716 MS4A6AQ9H2W1 248 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 ZZEF1O43149 2961 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 TET2Q6N021 2002 aaPredicted RBP10.3□□□□□ -0.76
VAMP1-201ENST00000361716 ATP5G2Q06055 141 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 CIARTQ8N365 385 aaPredicted RBP10.3□□□□□ -0.76
VAMP1-201ENST00000361716 SRSF12Q8WXF0 261 aaKnown RBP10.3□□□□□ -0.76
VAMP1-201ENST00000361716 SLC25A10Q9UBX3 287 aaPredicted RBP10.3□□□□□ -0.76
VAMP1-201ENST00000361716 RELNP78509 3460 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 GAGE12HA6NDE8 117 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 J3QR89 54 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 CECR9P0C854 216 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 PPIFP30405 207 aaKnown RBP10.3□□□□□ -0.76
VAMP1-201ENST00000361716 CHCHD1Q96BP2 118 aaKnown RBP10.3□□□□□ -0.76
VAMP1-201ENST00000361716 MBD6Q96DN6 1003 aa10.3□□□□□ -0.76
VAMP1-201ENST00000361716 WFDC2Q14508 124 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 ARPC1AQ92747 370 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 CALYQ9NYX4 217 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 ANKRD11Q6UB99 2663 aaPredicted RBP10.29□□□□□ -0.76
VAMP1-201ENST00000361716 C15orf61A6NNL5 157 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 F2RL2O00254 374 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 CCL8P80075 99 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 LINC00305Q7Z4B0 112 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 GTSF1Q8WW33 167 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 ITLN1Q8WWA0 313 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 ADGRG4Q8IZF6 3080 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 COL12A1Q99715 3063 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 FAM87AP0C7U9 286 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 IFI27P40305 119 aaPredicted RBP10.29□□□□□ -0.76
VAMP1-201ENST00000361716 SRSF6Q13247 344 aaKnown RBP10.29□□□□□ -0.76
VAMP1-201ENST00000361716 SPRNQ5BIV9 151 aa10.29□□□□□ -0.76
VAMP1-201ENST00000361716 BCL6BQ8N143 479 aaPredicted RBP10.29□□□□□ -0.76
VAMP1-201ENST00000361716 ATRXP46100 2492 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 TACC2O95359 2948 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 KALRNO60229 2985 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 IGKV1-16P04430 117 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 SAA2P0DJI9 122 aaPredicted RBP10.28□□□□□ -0.76
VAMP1-201ENST00000361716 CRYBA4P53673 196 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 ZNF329Q86UD4 541 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 PRSS46E5RG02 174 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 ERVK11-1P61568 191 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 UFSP1Q6NVU6 142 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 ZADH2Q8N4Q0 377 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 FAM216BQ8N7L0 139 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 STXBP6Q8NFX7 210 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 NEU4Q8WWR8 484 aaPredicted RBP10.28□□□□□ -0.76
VAMP1-201ENST00000361716 SRSF8Q9BRL6 282 aaKnown RBP10.28□□□□□ -0.76
VAMP1-201ENST00000361716 C19orf24Q9BVV8 132 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 SLC25A2Q9BXI2 301 aa10.28□□□□□ -0.76
VAMP1-201ENST00000361716 NTN3O00634 580 aaPredicted RBP10.27□□□□□ -0.76
VAMP1-201ENST00000361716 NKX2-8O15522 239 aa10.27□□□□□ -0.76
VAMP1-201ENST00000361716 LOXL1Q08397 574 aaPredicted RBP10.27□□□□□ -0.76
VAMP1-201ENST00000361716 OR5A1Q8NGJ0 315 aa10.27□□□□□ -0.76
VAMP1-201ENST00000361716 OR1L4Q8NGR5 311 aa10.27□□□□□ -0.76
VAMP1-201ENST00000361716 MALRD1Q5VYJ5 2156 aa10.27□□□□□ -0.77
VAMP1-201ENST00000361716 H3BMG7 143 aa10.27□□□□□ -0.77
VAMP1-201ENST00000361716 SLC25A17O43808 307 aa10.27□□□□□ -0.77
VAMP1-201ENST00000361716 OR2J3O76001 311 aa10.27□□□□□ -0.77
VAMP1-201ENST00000361716 RBPMS2Q6ZRY4 209 aaKnown RBP10.27□□□□□ -0.77
VAMP1-201ENST00000361716 FAM169BQ8N8A8 192 aa10.27□□□□□ -0.77
VAMP1-201ENST00000361716 SVIPQ8NHG7 77 aa10.27□□□□□ -0.77
VAMP1-201ENST00000361716 HARBI1Q96MB7 349 aa10.27□□□□□ -0.77
VAMP1-201ENST00000361716 CFHR2P36980 270 aa10.27□□□□□ -0.77
VAMP1-201ENST00000361716 NRN1LQ496H8 165 aa10.27□□□□□ -0.77
VAMP1-201ENST00000361716 TMEM178AQ8NBL3 297 aa10.27□□□□□ -0.77
VAMP1-201ENST00000361716 WIPF2Q8TF74 440 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms