RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 NGBQ9NPG2 151 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 OSTCQ9NRP0 149 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 A0A1B0GUS0 222 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 A0A1W2PPI3 338 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 TCRBV4S1A1TA0A5B7 111 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 ISLRO14498 428 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 CBLN1P23435 193 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 SIGLEC15Q6ZMC9 328 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 TGIF2LXQ8IUE1 241 aa5.81□□□□□ -1.48
CLCN3-202ENST00000360642 MRPL36Q9P0J6 103 aaKnown RBP5.81□□□□□ -1.48
CLCN3-202ENST00000360642 PLXNB1O43157 2135 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 IGHV1-69-2A0A0G2JMI3 117 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-202ENST00000360642 A8MWP6 167 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 CRYGCP07315 174 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 CRYGBP07316 175 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 FRMD6-AS1P0C7T7 363 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 ESDP10768 282 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 LGALS7P47929 136 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 SUB1P53999 127 aaKnown RBP eCLIP5.8□□□□□ -1.48
CLCN3-202ENST00000360642 CDSNQ15517 529 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 TMEM133Q9H2Q1 129 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 PRO1933Q9H354 126 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 TRBV9A0A0B4J1U6 114 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 IGLC7A0M8Q6 106 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 IGHV3-48P01763 117 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 CX3CL1P78423 397 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 VMA21Q3ZAQ7 101 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 RUSC1-AS1Q66K80 236 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 TEX45Q8NA69 505 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 TNFRSF14Q92956 283 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 MS4A10Q96PG2 267 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 GNB1LQ9BYB4 327 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 RNASE7Q9H1E1 156 aaKnown RBP5.8□□□□□ -1.48
CLCN3-202ENST00000360642 DYNLRB1Q9NP97 96 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 ZMAT5Q9UDW3 170 aaKnown RBP5.8□□□□□ -1.48
CLCN3-202ENST00000360642 TLN1Q9Y490 2541 aaKnown RBP5.8□□□□□ -1.48
CLCN3-202ENST00000360642 ATRXP46100 2492 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 K7ENP7 123 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 IGLV1-47P01700 117 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 RAB4BP61018 213 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 TIGITQ495A1 244 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 ZNF841Q6ZN19 808 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 OR5AU1Q8NGC0 362 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 OR1L6Q8NGR2 347 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 OR1L4Q8NGR5 311 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 NOL4LQ96MY1 436 aaPredicted RBP5.8□□□□□ -1.48
CLCN3-202ENST00000360642 ZNF355PQ9NSJ1 428 aa5.8□□□□□ -1.48
CLCN3-202ENST00000360642 ABCA1O95477 2261 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 SMIM27A0A1W2PRY6 76 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 GRIFINA4D1Z8 144 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 MYCNOSP40205 109 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 MFAP2P55001 183 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 TAS2R60P59551 318 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 Q0VG73 95 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 C10orf113Q5VZT2 155 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 LHFPL4Q7Z7J7 247 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 OR8I2Q8N0Y5 310 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 ST6GALNAC3Q8NDV1 305 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 WIPF2Q8TF74 440 aaPredicted RBP5.79□□□□□ -1.48
CLCN3-202ENST00000360642 FXYD5Q96DB9 178 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 MAP6D1Q9H9H5 199 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 COX7A2P2O60397 106 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 NDUFS7O75251 213 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 PYYP10082 97 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 IER3P46695 156 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 UBE2L3P68036 154 aaKnown RBP5.79□□□□□ -1.48
CLCN3-202ENST00000360642 PAX2Q02962 417 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 IQCJQ1A5X6 159 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 ZNF329Q86UD4 541 aa5.79□□□□□ -1.48
CLCN3-202ENST00000360642 IGHV2-26A0A0B4J1V2 119 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 ZNF705GA8MUZ8 300 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-202ENST00000360642 FCN1O00602 326 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 PRB4P10163 310 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-202ENST00000360642 IBA57Q5T440 356 aaKnown RBP5.78□□□□□ -1.48
CLCN3-202ENST00000360642 PAXXQ9BUH6 204 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 ABCA4P78363 2273 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 IGF2RP11717 2491 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 IGHV3-72A0A0B4J1Y9 119 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 SNURFLB1AK76 121 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 REG1AP05451 166 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 CRISP2P16562 243 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 FXYD3Q14802 87 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 ETFRF1Q6IPR1 90 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 TMEM136Q6ZRR5 245 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 CMTM2Q8TAZ6 248 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 LINC00479Q96M42 142 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 TRGV9Q99603 122 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 AMMECR1Q9Y4X0 333 aaPredicted RBP5.78□□□□□ -1.48
CLCN3-202ENST00000360642 BUB1B-PAK6H3BSN5 160 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 ENSAO43768 121 aaKnown RBP5.78□□□□□ -1.48
CLCN3-202ENST00000360642 APELAP0DMC3 54 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 CNTFRP26992 372 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 PRRX1P54821 245 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 PAFAH1B2P68402 229 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 FAM231DQ6ZW35 169 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 LINC00305Q7Z4B0 112 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 SIGLEC9Q9Y336 463 aa5.78□□□□□ -1.48
CLCN3-202ENST00000360642 MED13LQ71F56 2210 aa5.77□□□□□ -1.49
CLCN3-202ENST00000360642 IGHV1-3A0A0C4DH29 117 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms