RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 TGFBR1P36897 503 aa9.68□□□□□ -0.86
VPS29-201ENST00000360579 NMSQ5H8A3 153 aa9.68□□□□□ -0.86
VPS29-201ENST00000360579 SSX7Q7RTT5 188 aa9.68□□□□□ -0.86
VPS29-201ENST00000360579 TERB2Q8NHR7 220 aa9.68□□□□□ -0.86
VPS29-201ENST00000360579 PPP1R14BQ96C90 147 aa9.68□□□□□ -0.86
VPS29-201ENST00000360579 C16orf92Q96LL3 132 aa9.68□□□□□ -0.86
VPS29-201ENST00000360579 Q9H8V8 135 aa9.68□□□□□ -0.86
VPS29-201ENST00000360579 CBY3A6NI87 242 aa9.67□□□□□ -0.86
VPS29-201ENST00000360579 SNRPGP15A8MWD9 76 aa9.67□□□□□ -0.86
VPS29-201ENST00000360579 DUSP14O95147 198 aaKnown RBP9.67□□□□□ -0.86
VPS29-201ENST00000360579 TNFAIP8O95379 198 aa9.67□□□□□ -0.86
VPS29-201ENST00000360579 CD3DP04234 171 aa9.67□□□□□ -0.86
VPS29-201ENST00000360579 AMTNQ6UX39 209 aa9.67□□□□□ -0.86
VPS29-201ENST00000360579 OR13C8Q8NGS7 320 aa9.67□□□□□ -0.86
VPS29-201ENST00000360579 FAT1Q14517 4588 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 TEX13DA0A0J9YY54 714 aaPredicted RBP9.66□□□□□ -0.86
VPS29-201ENST00000360579 A0A1W2PPQ1 181 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 ZNF705GA8MUZ8 300 aaPredicted RBP9.66□□□□□ -0.86
VPS29-201ENST00000360579 GABARAPH6UMI1 98 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 GABARAPO95166 117 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 OR5AC1P0C628 307 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 INAFM2P0DMQ5 153 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 GPX4P36969 197 aaPredicted RBP9.66□□□□□ -0.86
VPS29-201ENST00000360579 GALR1P47211 349 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 ATP5IP56385 69 aaPredicted RBP9.66□□□□□ -0.86
VPS29-201ENST00000360579 KRTAP10-2P60368 255 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 LYZP61626 148 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 SCGB2B2Q4G0G5 96 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 GPR141Q7Z602 305 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 GLYATL2Q8WU03 294 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 RNF141Q8WVD5 230 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 SLC35E1Q96K37 410 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 Q9H3A6 140 aa9.66□□□□□ -0.86
VPS29-201ENST00000360579 C14orf166Q9Y224 244 aaKnown RBP9.66□□□□□ -0.86
VPS29-201ENST00000360579 LSM3P62310 102 aaKnown RBP9.65□□□□□ -0.86
VPS29-201ENST00000360579 ZNF90Q03938 601 aa9.65□□□□□ -0.86
VPS29-201ENST00000360579 SELENOHQ8IZQ5 122 aaKnown RBP9.65□□□□□ -0.86
VPS29-201ENST00000360579 LGI3Q8N145 548 aa9.65□□□□□ -0.86
VPS29-201ENST00000360579 LHFPL5Q8TAF8 219 aa9.65□□□□□ -0.86
VPS29-201ENST00000360579 MARCH1Q8TCQ1 289 aa9.65□□□□□ -0.86
VPS29-201ENST00000360579 NAA60Q9H7X0 242 aa9.65□□□□□ -0.86
VPS29-201ENST00000360579 PTTG2Q9NZH5 202 aa9.65□□□□□ -0.86
VPS29-201ENST00000360579 MYCBP2O75592 4640 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 CFDP00746 253 aaPredicted RBP9.64□□□□□ -0.87
VPS29-201ENST00000360579 SULT1A3P0DMM9 295 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 SULT1A4P0DMN0 295 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 ELK1P19419 428 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 CNN1P51911 297 aaKnown RBP9.64□□□□□ -0.87
VPS29-201ENST00000360579 GAMTQ14353 236 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 SPINK13Q1W4C9 94 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 TMEM268Q5VZI3 342 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 OR11H7Q8NGC8 314 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 DTD1Q8TEA8 209 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 ZNF503Q96F45 646 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 C20orf173Q96LM9 149 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 MTFP1Q9UDX5 166 aa9.64□□□□□ -0.87
VPS29-201ENST00000360579 VPS13BQ7Z7G8 4022 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 IGKV1D-37A0A075B6S9 117 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 PLAC8L1A1L4L8 177 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 M0R2Z0 102 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 CRXO43186 299 aaPredicted RBP9.63□□□□□ -0.87
VPS29-201ENST00000360579 ZNF182P17025 639 aaPredicted RBP9.63□□□□□ -0.87
VPS29-201ENST00000360579 S100A7P31151 101 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 TAS2R19P59542 299 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 MEF2DQ14814 521 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 SURF2Q15527 256 aaPredicted RBP9.63□□□□□ -0.87
VPS29-201ENST00000360579 RNASE12Q5GAN4 147 aaKnown RBP9.63□□□□□ -0.87
VPS29-201ENST00000360579 TMEM256Q8N2U0 113 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 OR52I2Q8NH67 350 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 C15orf40Q8WUR7 153 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 C16orf74Q96GX8 76 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 UPK3BQ9BT76 320 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 RSG1Q9BU20 258 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 KRTAP1-5Q9BYS1 174 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 SLC45A2Q9UMX9 530 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 TMEM56-RWDD3S4R434 201 aa9.63□□□□□ -0.87
VPS29-201ENST00000360579 FAM25AB3EWG3 89 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 FAM25CB3EWG5 89 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 FAM25GB3EWG6 89 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 HPGDSO60760 199 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 RAB3DO95716 219 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 PRM2P04554 102 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 TAS2R60P59551 318 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 FCN2Q15485 313 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 GPR107Q5VW38 600 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 BAP18Q8IXM2 172 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 TMEM229BQ8NBD8 167 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 OR4D10Q8NGI6 311 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 OR4D5Q8NGN0 318 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 OR1B1Q8NGR6 318 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 OR10J6PQ8NGY7 276 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 IL22RA2Q969J5 263 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 YIPF6Q96EC8 236 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 GNPNAT1Q96EK6 184 aaPredicted RBP9.62□□□□□ -0.87
VPS29-201ENST00000360579 GPR82Q96P67 336 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 LINC01587Q99440 93 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 TRGV9Q99603 122 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 RTBDNQ9BSG5 229 aaPredicted RBP9.62□□□□□ -0.87
VPS29-201ENST00000360579 VCX3AQ9NNX9 186 aa9.62□□□□□ -0.87
VPS29-201ENST00000360579 HSPB7Q9UBY9 170 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms