RNA–Protein interactions for RNA: ENST00000360439.8

SIN3A-201, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 5,050 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-201ENST00000360439 HRCT1Q6UXD1 115 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 Q6ZSR3 168 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 OR4X2Q8NGF9 303 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 ZNF488Q96MN9 340 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 SSBP3Q9BWW4 388 aaPredicted RBP8.22□□□□□ -1.09
SIN3A-201ENST00000360439 MED13LQ71F56 2210 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 S100A7L2Q5SY68 101 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 TTC9CQ8N5M4 171 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 ZNF524Q96C55 264 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 CCL13Q99616 98 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 FBXL15Q9H469 300 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 TRAV9-1A0A075B6T8 112 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 FAM181BA6NEQ2 426 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 RNF138Q8WVD3 245 aa8.22□□□□□ -1.09
SIN3A-201ENST00000360439 TRAV2A0A0B4J234 112 aa8.21□□□□□ -1.09
SIN3A-201ENST00000360439 PFN1P07737 140 aaKnown RBP8.21□□□□□ -1.09
SIN3A-201ENST00000360439 AGMATQ9BSE5 352 aa8.21□□□□□ -1.09
SIN3A-201ENST00000360439 ZNF525Q8N782 197 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 AMY1AP04745 511 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 CELA3BP08861 270 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 OPRK1P41145 380 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 GGNQ86UU5 652 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 KIAA2026Q5HYC2 2103 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.21□□□□□ -1.16e-7■■■■□ 23.5
SIN3A-201ENST00000360439 WNT2P09544 360 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 HSPE1P61604 102 aaKnown RBP8.21□□□□□ -1.1
SIN3A-201ENST00000360439 ZNF56Q15929 161 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 NMSQ5H8A3 153 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 SP5Q6BEB4 398 aaPredicted RBP8.21□□□□□ -1.1
SIN3A-201ENST00000360439 ZIC4Q8N9L1 334 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 GLMPQ8WWB7 406 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 SLC25A10Q9UBX3 287 aaPredicted RBP8.21□□□□□ -1.1
SIN3A-201ENST00000360439 EPDR1Q9UM22 224 aa8.21□□□□□ -1.1
SIN3A-201ENST00000360439 HEATR5AQ86XA9 2040 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 TRBV9A0A0B4J1U6 114 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 NPIPB11E5RHQ5 1161 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 TRACP01848 142 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 IGHG3P01860 377 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 RPL31P62899 125 aaKnown RBP8.2□□□□□ -1.1
SIN3A-201ENST00000360439 COA6Q5JTJ3 125 aaKnown RBP8.2□□□□□ -1.1
SIN3A-201ENST00000360439 FGFRL1Q8N441 504 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 OR9G4Q8NGQ1 327 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 JMJD8Q96S16 334 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 ATRXP46100 2492 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 FAM106CPP0CH98 169 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 FAM106AQ4KMX7 169 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 IGKV1-27A0A075B6S5 117 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 CRYBB3P26998 211 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 RPRMLQ8N4K4 120 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 FAM168AQ92567 244 aa8.2□□□□□ -1.1
SIN3A-201ENST00000360439 NPFFO15130 113 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 TMEM50AO95807 157 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 PMVKQ15126 192 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 FAM157AC9JC47 383 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 NAPSAO96009 420 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 FOXG1P55316 489 aaPredicted RBP8.19□□□□□ -1.1
SIN3A-201ENST00000360439 C1orf195Q5TG92 126 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 ZCCHC24Q8N2G6 241 aaKnown RBP8.19□□□□□ -1.1
SIN3A-201ENST00000360439 OR10J6PQ8NGY7 276 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 PRADC1Q9BSG0 188 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 IGKV1-12A0A0C4DH73 117 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 A0A1W2PS18 150 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 FCGR3BO75015 233 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 IGKV1D-12P01611 117 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 RNF144BQ7Z419 303 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 PPDPFLQ8WWR9 84 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 WNK2Q9Y3S1 2297 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 IGKV3D-15A0A087WSY6 115 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 MLNRO43193 412 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 PRDX2P32119 198 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 NDUFV3P56181 108 aaKnown RBP8.19□□□□□ -1.1
SIN3A-201ENST00000360439 ERHP84090 104 aaKnown RBP8.19□□□□□ -1.1
SIN3A-201ENST00000360439 SIRPDQ9H106 197 aa8.19□□□□□ -1.1
SIN3A-201ENST00000360439 CADP27708 2225 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 SH2D7A6NKC9 451 aaPredicted RBP8.18□□□□□ -1.1
SIN3A-201ENST00000360439 FCGR2BP31994 310 aaPredicted RBP8.18□□□□□ -1.1
SIN3A-201ENST00000360439 OR10J3Q5JRS4 329 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 NXT2Q9NPJ8 142 aaKnown RBP8.18□□□□□ -1.1
SIN3A-201ENST00000360439 Q6ZUT4 128 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 IL36BQ9NZH7 164 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 F2Z2F3 143 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 K7ERJ3 54 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 RPL8P62917 257 aaKnown RBP8.18□□□□□ -1.1
SIN3A-201ENST00000360439 UBE2L3P68036 154 aaKnown RBP8.18□□□□□ -1.1
SIN3A-201ENST00000360439 MRPL27Q9P0M9 148 aaKnown RBP8.18□□□□□ -1.1
SIN3A-201ENST00000360439 RANBP2P49792 3224 aaKnown RBP8.18□□□□□ -1.1
SIN3A-201ENST00000360439 ANKRD11Q6UB99 2663 aaPredicted RBP8.18□□□□□ -1.1
SIN3A-201ENST00000360439 LOC107984640A0A0U1RRK4 108 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 FAM90A9PA6NNJ1 464 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 LINC00694P0DN24 101 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 EDN2P20800 178 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 DRAM1Q8N682 238 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 SSUH2Q9Y2M2 353 aa8.18□□□□□ -1.1
SIN3A-201ENST00000360439 MBD3L4A6NDZ8 208 aaPredicted RBP8.17□□□□□ -1.1
SIN3A-201ENST00000360439 MBD3L3A6NE82 208 aaPredicted RBP8.17□□□□□ -1.1
SIN3A-201ENST00000360439 MBD3L5A6NJ08 208 aaPredicted RBP8.17□□□□□ -1.1
SIN3A-201ENST00000360439 MBD3L2Q8NHZ7 208 aaPredicted RBP8.17□□□□□ -1.1
SIN3A-201ENST00000360439 COMMD5Q9GZQ3 224 aa8.17□□□□□ -1.1
SIN3A-201ENST00000360439 PRNDQ9UKY0 176 aa8.17□□□□□ -1.1
SIN3A-201ENST00000360439 TINCRA0A1B0GVN0 87 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms