RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SP9P0CG40 484 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 SPSB3Q6PJ21 355 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 RASL10AQ92737 203 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 RNASE6Q93091 150 aaKnown RBP11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 SS18Q15532 418 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 UBE2WQ96B02 151 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 TMEM8BA6NDV4 472 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 C1orf43Q9BWL3 253 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 FAM208BQ5VWN6 2430 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 ZNF625Q96I27 306 aaPredicted RBP11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 OTOGLQ3ZCN5 2332 aa11.04□□□□□ -0.64
SRGAP3-201ENST00000360413 MYO18BQ8IUG5 2567 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 SYS1-DBNDD2H3BUS1 97 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 TM2D1Q9BX74 207 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 DEPPQ9NTK1 212 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 NCR2O95944 276 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 SCRT1Q9BWW7 348 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 CD55P08174 381 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 LCNL1Q6ZST4 164 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 C17orf98A8MV24 154 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 CRYBA2P53672 197 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 CLEC19AQ6UXS0 136 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 SIGLEC15Q6ZMC9 328 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 PEBP1P30086 187 aaKnown RBP11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 MRPS18CQ9Y3D5 142 aaKnown RBP11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 IL9P15248 144 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 ERCC8Q13216 396 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 LY6G6FQ5SQ64 297 aa11.03□□□□□ -0.64
SRGAP3-201ENST00000360413 C3orf79P0CE67 100 aa11.02□□□□□ -0.64
SRGAP3-201ENST00000360413 COLCA1Q6ZS62 124 aa11.02□□□□□ -0.64
SRGAP3-201ENST00000360413 BSPH1Q075Z2 132 aa11.02□□□□□ -0.64
SRGAP3-201ENST00000360413 TEX43Q6ZNM6 134 aa11.02□□□□□ -0.64
SRGAP3-201ENST00000360413 EML5Q05BV3 1969 aa11.02□□□□□ -0.64
SRGAP3-201ENST00000360413 FAM231BA6NCW3 169 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 GREM1O60565 184 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 D6R8Y8 96 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 PRR14LQ5THK1 2151 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 TRBV7-1A0A0A6YYK4 115 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 WISP3O95389 354 aaPredicted RBP11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 WNT2P09544 360 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 SLC25A48Q6ZT89 311 aaKnown RBP11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 TMEM144Q7Z5S9 345 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 CCL1P22362 96 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 C1QL2Q7Z5L3 287 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 REG4Q9BYZ8 158 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 AZU1P20160 251 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 MPZP25189 248 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 RNF125Q96EQ8 232 aa11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 NCOA6Q14686 2063 aaPredicted RBP11.02□□□□□ -0.65
SRGAP3-201ENST00000360413 A0A0G2JK05 382 aa11.01□□□□□ -0.65
SRGAP3-201ENST00000360413 C20orf204Q6ZNR8 217 aa11.01□□□□□ -0.65
SRGAP3-201ENST00000360413 INS-IGF2F8WCM5 200 aa11.01□□□□□ -0.65
SRGAP3-201ENST00000360413 INSP01308 110 aa11.01□□□□□ -0.65
SRGAP3-201ENST00000360413 PAX8Q06710 450 aa11.01□□□□□ -0.65
SRGAP3-201ENST00000360413 LINC01590Q5TEZ4 76 aa11.01□□□□□ -0.65
SRGAP3-201ENST00000360413 ARHGAP21Q5T5U3 1957 aa11.01□□□□□ -0.65
SRGAP3-201ENST00000360413 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.01□□□□□ -0.65
SRGAP3-201ENST00000360413 YPEL1O60688 119 aa11.01□□□□□ -0.65
SRGAP3-201ENST00000360413 RPRMLQ8N4K4 120 aa11.01□□□□□ -0.65
SRGAP3-201ENST00000360413 YPEL2Q96QA6 119 aa11.01□□□□□ -0.65
SRGAP3-201ENST00000360413 OOSP1A8MZH6 123 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 PPIFP30405 207 aaKnown RBP11□□□□□ -0.65
SRGAP3-201ENST00000360413 WFDC1Q9HC57 220 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 EFNB3Q15768 340 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 USMG5Q96IX5 58 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 PTPN13Q12923 2485 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
SRGAP3-201ENST00000360413 MYMXA0A1B0GTQ4 84 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 GAGE1Q13065 139 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 SNHG12Q9BXW3 62 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 SS18L2Q9UHA2 77 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 F8W1H4 67 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 FOXS1O43638 330 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 C6orf226Q5I0X4 101 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 CSPG4Q6UVK1 2322 aa11□□□□□ -0.65
SRGAP3-201ENST00000360413 A0A1B0GW64 132 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 ZNRF1Q8ND25 227 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 GAGE12HA6NDE8 117 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 PYYP10082 97 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 COX6A1P12074 109 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 FXYD7P58549 80 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 BOD1L2Q8IYS8 172 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 GLMPQ8WWB7 406 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 POLR3KQ9Y2Y1 108 aaPredicted RBP10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 GLI3P10071 1580 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 IGHV3OR16-8A0A075B7F1 116 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 K7EP13 123 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 NEGR1Q7Z3B1 354 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 VCYO14598 125 aa10.99□□□□□ -0.65
SRGAP3-201ENST00000360413 C9orf118A6NHY6 69 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 SELLP14151 372 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 TFF2Q03403 129 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 ZNF114Q8NC26 417 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 MBNL3Q9NUK0 354 aaKnown RBP10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 TRBV20-1A0A075B6N2 111 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 PPDPFLQ8WWR9 84 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 NPIPB5A8MRT5 1133 aa10.98□□□□□ -0.65
SRGAP3-201ENST00000360413 C17orf100A8MU93 164 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms