RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 C8orf31Q8N9H6 132 aa3.97□□□□□ -1.77
SCN3A-202ENST00000360093 LINC00473A8K010 186 aa3.96□□□□□ -1.77
SCN3A-202ENST00000360093 H3BVH4 76 aa3.96□□□□□ -1.77
SCN3A-202ENST00000360093 AMBPP02760 352 aa3.96□□□□□ -1.77
SCN3A-202ENST00000360093 PLAURQ03405 335 aa3.96□□□□□ -1.77
SCN3A-202ENST00000360093 OR5AN1Q8NGI8 311 aa3.96□□□□□ -1.77
SCN3A-202ENST00000360093 IGHV2-70DA0A0C4DH43 119 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 TMEM170BQ5T4T1 132 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 TMEM170AQ8WVE7 144 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 KLK15Q9H2R5 256 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 RFNGQ9Y644 331 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 EIF3GO75821 320 aaKnown RBP eCLIP3.96□□□□□ -1.78
SCN3A-202ENST00000360093 TMEM50AO95807 157 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 LYPD2Q6UXB3 125 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 DAZ1Q9NQZ3 744 aaKnown RBP3.96□□□□□ -1.78
SCN3A-202ENST00000360093 TMEM14BQ9NUH8 114 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 TMEM160Q9NX00 188 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 GRIFINA4D1Z8 144 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 PYYP10082 97 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 HOXA5P20719 270 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 PIP4P2Q8N4L2 257 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 RNASE7Q9H1E1 156 aaKnown RBP3.96□□□□□ -1.78
SCN3A-202ENST00000360093 GAGE10A6NGK3 116 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 PMS2P5A8MQ11 134 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 K7ERU9 68 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 IGLV3-1P01715 115 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 ERVK11-1P61568 191 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 KLRD1Q13241 179 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 SLX1AQ9BQ83 275 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 CYSLTR1Q9Y271 337 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 IGHV1-69DA0A0B4J2H0 117 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 IGHV1-69P01742 117 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 ZNF415Q09FC8 603 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 RNF138Q8WVD3 245 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 WFDC1Q9HC57 220 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-202ENST00000360093 DNAL4O96015 105 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 RNASE2P10153 161 aaKnown RBP3.96□□□□□ -1.78
SCN3A-202ENST00000360093 RPL24P83731 157 aaKnown RBP3.96□□□□□ -1.78
SCN3A-202ENST00000360093 PRADC1Q9BSG0 188 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 BEX4Q9NWD9 120 aaPredicted RBP3.96□□□□□ -1.78
SCN3A-202ENST00000360093 GPR179Q6PRD1 2367 aa3.96□□□□□ -1.78
SCN3A-202ENST00000360093 USF3Q68DE3 2245 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 C5orf63A6NC05 138 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 J3QKU1 62 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 OCC1Q8TAD7 63 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 VCX2Q9H322 139 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 TRBV24-1A0A075B6N3 115 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 SAP30O75446 220 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 HBDP02042 147 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 LINC00614P0C842 121 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 TCF15Q12870 199 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 FAM110DQ8TAY7 271 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-202ENST00000360093 SMPXQ9UHP9 88 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 LOC107984156A0A0G2JMH3 177 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 ZNF25P17030 456 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-202ENST00000360093 DDTP30046 118 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 FOXA3P55318 350 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-202ENST00000360093 YPEL3P61236 119 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-202ENST00000360093 PSG3Q16557 428 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 C1orf194Q5T5A4 169 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 TMEM219Q86XT9 240 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 ARL17AQ8IVW1 177 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 COL4A4P53420 1690 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-202ENST00000360093 TDGF1P13385 188 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 GNG5P63218 68 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 C15orf62A8K5M9 175 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 CNTFRP26992 372 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 Q5PR19 223 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 VOPP1Q96AW1 172 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 CYTL1Q9NRR1 136 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 KLF2Q9Y5W3 355 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-202ENST00000360093 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.95□□□□□ -1.78
SCN3A-202ENST00000360093 NBASA2RRP1 2371 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 TRGV4A0A0C4DH28 118 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 SMIM13P0DJ93 91 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 LAMTOR2Q9Y2Q5 125 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 LINC00587B1AMM8 73 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 PRB3Q04118 309 aaPredicted RBP3.95□□□□□ -1.78
SCN3A-202ENST00000360093 Q8NFD4 153 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 FAM215AQ9Y5M1 114 aa3.95□□□□□ -1.78
SCN3A-202ENST00000360093 CADP27708 2225 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 IGHV3OR16-8A0A075B7F1 116 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 NPIPB5A8MRT5 1133 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 H3BUA1 57 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 TCRAP04437 139 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 C1QL4Q86Z23 238 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 TTC9CQ8N5M4 171 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 SCRT1Q9BWW7 348 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 GFRA4Q9GZZ7 299 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 NDUFA4L2Q9NRX3 87 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 TECTAO75443 2155 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 SPTAN1Q13813 2472 aaKnown RBP3.94□□□□□ -1.78
SCN3A-202ENST00000360093 C1QTNF9P0C862 333 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 MALP21145 153 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 NTF4P34130 210 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 PRR30Q53SZ7 412 aaPredicted RBP3.94□□□□□ -1.78
SCN3A-202ENST00000360093 RPP25LQ8N5L8 163 aaKnown RBP3.94□□□□□ -1.78
SCN3A-202ENST00000360093 NUDT10Q8NFP7 164 aa3.94□□□□□ -1.78
SCN3A-202ENST00000360093 MRAP2Q96G30 205 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms