RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CSRP1P21291 193 aaKnown RBP4.76□□□□□ -1.65
BRCA1-203ENST00000357654 TMEM30BQ3MIR4 351 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 HRCT1Q6UXD1 115 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 NABP1Q96AH0 204 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 PLEKHB2Q96CS7 222 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 MGST2Q99735 147 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 LTBP1Q14766 1721 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 PSG3Q16557 428 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 DMKNQ6E0U4 476 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-203ENST00000357654 CAMK2N2Q96S95 79 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 ACYP1P07311 99 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 CXCL3P19876 107 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 DYNAPQ8N1N2 210 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 AMELYQ99218 206 aa4.76□□□□□ -1.65
BRCA1-203ENST00000357654 SNRNP200O75643 2136 aaKnown RBP4.75□□□□□ -1.65
BRCA1-203ENST00000357654 A0A1W2PPV9 198 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 KLK8O60259 260 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 IGFBP3P17936 291 aaPredicted RBP4.75□□□□□ -1.65
BRCA1-203ENST00000357654 FAM90A2PQ658T7 463 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 IGHV1-3A0A0C4DH29 117 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 AMBPP02760 352 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 NANOS3P60323 173 aaKnown RBP4.75□□□□□ -1.65
BRCA1-203ENST00000357654 OVOL2Q9BRP0 275 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 REG4Q9BYZ8 158 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 A6NNC1 897 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 NCR3O14931 201 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 C9orf66Q5T8R8 295 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 DEPPQ9NTK1 212 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 MYH4Q9Y623 1939 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 UPK2O00526 184 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 UBE2D3P61077 147 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 ZNF124Q15973 351 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 MORN5Q5VZ52 161 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 IFI27L1Q96BM0 104 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 IL36BQ9NZH7 164 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 IZUMO1RA6ND01 250 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 D6R8Y8 96 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 IGLV3-25P01717 112 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 SPINK8P0C7L1 97 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 GP9P14770 177 aa4.75□□□□□ -1.65
BRCA1-203ENST00000357654 TIMP3P35625 211 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 SCAND1P57086 179 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 PKIGQ9Y2B9 76 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 COL5A3P25940 1745 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-203ENST00000357654 IGLV2-18A0A075B6J9 118 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 FAM223BA6NKX1 122 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 SH2D1AO60880 128 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 RAMP3O60896 148 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 IGHMP01871 453 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 APRG1Q8IVJ8 170 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 FAM223AQ8IWN6 122 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 SMIM8Q96KF7 97 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 TRAF4Q9BUZ4 470 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-203ENST00000357654 TMEM242Q9NWH2 141 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 TSSC4Q9Y5U2 329 aaPredicted RBP4.74□□□□□ -1.65
BRCA1-203ENST00000357654 TAF1P21675 1872 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 CA7P43166 264 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 HERV-K104P63124 156 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 PRR4Q16378 134 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 ZC2HC1AQ96GY0 325 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 UBL5Q9BZL1 73 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 DICER1Q9UPY3 1922 aaKnown RBP4.74□□□□□ -1.65
BRCA1-203ENST00000357654 IGKV1-16P04430 117 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 VSIRQ9H7M9 311 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 DAZ1Q9NQZ3 744 aaKnown RBP4.74□□□□□ -1.65
BRCA1-203ENST00000357654 ZNFX1Q9P2E3 1918 aaKnown RBP4.74□□□□□ -1.65
BRCA1-203ENST00000357654 TRBV9A0A0B4J1U6 114 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 A0A0G2JK05 382 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 A0A0J9YWU9 116 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 CHAC1Q9BUX1 264 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 IGKV1-27A0A075B6S5 117 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 ERVH48-1M5A8F1 160 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 LYZL1Q6UWQ5 148 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 NRGNQ92686 78 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 USMG5Q96IX5 58 aa4.74□□□□□ -1.65
BRCA1-203ENST00000357654 ZNF708P17019 499 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 NOVP48745 357 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 ZNF138P52744 262 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 ICOSQ9Y6W8 199 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 EVPLQ92817 2033 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 CCL24O00175 119 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 PEX11BO96011 259 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 RBM3P98179 157 aaKnown RBP4.73□□□□□ -1.65
BRCA1-203ENST00000357654 SAMD5Q5TGI4 173 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 C8orf86Q6ZUL3 223 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 LY6G5BQ8NDX9 201 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 PLPPR1Q8TBJ4 325 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 LAMB4A4D0S4 1761 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 ANKRD36CQ5JPF3 1778 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 PINLYPA6NC86 204 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 C9JAW5 83 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 HLA-DQB1P01920 261 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 CD55P08174 381 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 IGHV1-8P0DP01 117 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 CFHR2P36980 270 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 LYPD2Q6UXB3 125 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.73□□□□□ -1.65
BRCA1-203ENST00000357654 B9D2Q9BPU9 175 aa4.73□□□□□ -1.65
BRCA1-203ENST00000357654 SLIRPQ9GZT3 109 aaKnown RBP4.73□□□□□ -1.65
BRCA1-203ENST00000357654 X6R8D5 127 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms