RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 KBTBD11-OT1A0A1B0GTJ5 212 aa11.78□□□□□ -0.52
TOP3B-201ENST00000357179 SMIM13P0DJ93 91 aa11.78□□□□□ -0.52
TOP3B-201ENST00000357179 ZNRF1Q8ND25 227 aa11.78□□□□□ -0.52
TOP3B-201ENST00000357179 TRAV26-1A0A087WT03 109 aa11.78□□□□□ -0.52
TOP3B-201ENST00000357179 J3QR89 54 aa11.78□□□□□ -0.52
TOP3B-201ENST00000357179 UPK2O00526 184 aa11.78□□□□□ -0.52
TOP3B-201ENST00000357179 ZNF207O43670 478 aaKnown RBP11.78□□□□□ -0.52
TOP3B-201ENST00000357179 COX7A2P2O60397 106 aa11.78□□□□□ -0.52
TOP3B-201ENST00000357179 LHBP01229 141 aa11.78□□□□□ -0.52
TOP3B-201ENST00000357179 IGHV3-13P01766 116 aa11.78□□□□□ -0.52
TOP3B-201ENST00000357179 FCGR2BP31994 310 aaPredicted RBP11.78□□□□□ -0.52
TOP3B-201ENST00000357179 FSTL3O95633 263 aa11.77□□□□□ -0.52
TOP3B-201ENST00000357179 SLC25A5P05141 298 aaKnown RBP11.77□□□□□ -0.52
TOP3B-201ENST00000357179 TMEM30BQ3MIR4 351 aa11.77□□□□□ -0.52
TOP3B-201ENST00000357179 C10orf113Q5VZT2 155 aa11.77□□□□□ -0.52
TOP3B-201ENST00000357179 C9orf106Q8NAJ2 232 aa11.77□□□□□ -0.52
TOP3B-201ENST00000357179 SPANXB1Q9NS25 103 aaPredicted RBP11.77□□□□□ -0.52
TOP3B-201ENST00000357179 IGHV3OR15-7A0A075B7D8 119 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 A0A096LNJ9 63 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 C22orf46C9J442 243 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 NPIPB6E9PJ23 425 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 LTAP01374 205 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 RNASE2P10153 161 aaKnown RBP11.77□□□□□ -0.53
TOP3B-201ENST00000357179 PATE2Q6UY27 113 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 OR1L8Q8NGR8 309 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 PRR33A8MZF0 331 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 OVOL3O00110 214 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 CRYBA4P53673 196 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 DHRS13Q6UX07 377 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 RPRMLQ8N4K4 120 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 OR1L4Q8NGR5 311 aa11.77□□□□□ -0.53
TOP3B-201ENST00000357179 OR8A1Q8NGG7 326 aa11.76□□□□□ -0.53
TOP3B-201ENST00000357179 DAZAP1Q96EP5 407 aaKnown RBP11.76□□□□□ -0.53
TOP3B-201ENST00000357179 ARRDC1-AS1Q9H2J1 176 aa11.76□□□□□ -0.53
TOP3B-201ENST00000357179 LINC00574Q9H8X3 128 aa11.76□□□□□ -0.53
TOP3B-201ENST00000357179 COL6A3P12111 3177 aa11.76□□□□□ -0.53
TOP3B-201ENST00000357179 CD59P13987 128 aa11.76□□□□□ -0.53
TOP3B-201ENST00000357179 UTF1Q5T230 341 aa11.76□□□□□ -0.53
TOP3B-201ENST00000357179 PDPNQ86YL7 162 aa11.76□□□□□ -0.53
TOP3B-201ENST00000357179 CACNG8Q8WXS5 425 aa11.76□□□□□ -0.53
TOP3B-201ENST00000357179 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
TOP3B-201ENST00000357179 FMC1Q96HJ9 113 aa11.76□□□□□ -0.53
TOP3B-201ENST00000357179 ZNF48Q96MX3 618 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-201ENST00000357179 ZNF71Q9NQZ8 489 aaPredicted RBP11.76□□□□□ -0.53
TOP3B-201ENST00000357179 AHCTF1Q8WYP5 2266 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 SPAARA0A1B0GVQ0 90 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 ATP1A1-AS1Q5TC04 95 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 PCP2Q8IVA1 136 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 PRSS3P2Q8NHM4 247 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 SIGLEC8Q9NYZ4 499 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 FRYQ5TBA9 3013 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 PGPA6NDG6 321 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 F8W1H4 67 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 MOGAT3Q86VF5 341 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 OR5AN1Q8NGI8 311 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 C18orf15Q96N68 181 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 DKK4Q9UBT3 224 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 SLC25A15Q9Y619 301 aa11.75□□□□□ -0.53
TOP3B-201ENST00000357179 MSMPQ1L6U9 139 aa11.74□□□□□ -0.53
TOP3B-201ENST00000357179 GATD1Q8NB37 220 aa11.74□□□□□ -0.53
TOP3B-201ENST00000357179 BLNKQ8WV28 456 aa11.74□□□□□ -0.53
TOP3B-201ENST00000357179 FAM186AA6NE01 2351 aa11.74□□□□□ -0.53
TOP3B-201ENST00000357179 TCTAP57738 103 aa11.74□□□□□ -0.53
TOP3B-201ENST00000357179 CACNG7P62955 275 aa11.74□□□□□ -0.53
TOP3B-201ENST00000357179 SSBP2P81877 361 aaPredicted RBP11.74□□□□□ -0.53
TOP3B-201ENST00000357179 MRAP2Q96G30 205 aa11.74□□□□□ -0.53
TOP3B-201ENST00000357179 KNTC1P50748 2209 aa11.74□□□□□ -0.53
TOP3B-201ENST00000357179 DLL1O00548 723 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 NKX2-8O15522 239 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 FAM106CPP0CH98 169 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 MC5RP33032 325 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 GATA4P43694 442 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 FXYD2P54710 66 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 FAM106AQ4KMX7 169 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 PHLDA1Q8WV24 401 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-201ENST00000357179 PROCRQ9UNN8 238 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 FBLL1A6NHQ2 334 aaKnown RBP11.73□□□□□ -0.53
TOP3B-201ENST00000357179 INS-IGF2F8WCM5 200 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 WFDC2Q14508 124 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 SPAG8Q99932 426 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-201ENST00000357179 A0A1B0GUT8 65 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 TM4SF5O14894 197 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 NMUP48645 174 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 LOXL1Q08397 574 aaPredicted RBP11.73□□□□□ -0.53
TOP3B-201ENST00000357179 TM4SF20Q53R12 229 aa11.73□□□□□ -0.53
TOP3B-201ENST00000357179 SLC25A48Q6ZT89 311 aaKnown RBP11.73□□□□□ -0.53
TOP3B-201ENST00000357179 DYSFO75923 2080 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 CT45A6P0DMU7 189 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 CT45A5P0DMU8 189 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 CT45A7P0DMV0 189 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 COL8A1P27658 744 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 SPRNQ5BIV9 151 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 STXBP6Q8NFX7 210 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 F11RQ9Y624 299 aaKnown RBP11.72□□□□□ -0.53
TOP3B-201ENST00000357179 FREM2Q5SZK8 3169 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 K7EQM0 130 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 GLRXP35754 106 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 IFI27P40305 119 aaPredicted RBP11.72□□□□□ -0.53
TOP3B-201ENST00000357179 LINC00305Q7Z4B0 112 aa11.72□□□□□ -0.53
TOP3B-201ENST00000357179 BCL6BQ8N143 479 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms