RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 RNF152Q8N8N0 203 aa14.03□□□□□ -0.16
SMARCD3-202ENST00000356800 OR51G1Q8NGK1 321 aa14.03□□□□□ -0.16
SMARCD3-202ENST00000356800 OR1B1Q8NGR6 318 aa14.03□□□□□ -0.16
SMARCD3-202ENST00000356800 MYOZ3Q8TDC0 251 aa14.03□□□□□ -0.16
SMARCD3-202ENST00000356800 A0A0G2JLM5 398 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 NUPL2O15504 423 aaKnown RBP14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 TGOLN2O43493 480 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 TCF21O43680 179 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 NDUFS6O75380 124 aaKnown RBP14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 OR2C1O95371 312 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 TRBV12-3P01733 135 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 ELANEP08246 267 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 GCHFRP30047 84 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 SRSF2Q01130 221 aaKnown RBP14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 MORN5Q5VZ52 161 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 ZNF343Q6P1L6 599 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 IQCF2Q8IXL9 164 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 RXFP4Q8TDU9 374 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 C16orf95Q9H693 158 aa14.02□□□□□ -0.16
SMARCD3-202ENST00000356800 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 WI2-2373I1.2A0A1W2PRP0 233 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 PPP5D1E7EU14 171 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 LINC00305Q7Z4B0 112 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 KLHDC1Q8N7A1 406 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 ZNF491Q8N8L2 437 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 WIPF2Q8TF74 440 aaPredicted RBP14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 FAM167A-AS1Q96KT0 104 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 UHRF2Q96PU4 802 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 MRPL27Q9P0M9 148 aaKnown RBP14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 CARHSP1Q9Y2V2 147 aaKnown RBP14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 IGHV3-35A0A0C4DH35 117 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 F8W036 122 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 LYZP61626 148 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 OR4X2Q8NGF9 303 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 LINC01006Q8NI28 216 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 Q8WTZ3 238 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 ZNF503Q96F45 646 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 SLC25A2Q9BXI2 301 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 TMEM167BQ9NRX6 74 aa14.01□□□□□ -0.17
SMARCD3-202ENST00000356800 SRP19P09132 144 aaKnown RBP14□□□□□ -0.17
SMARCD3-202ENST00000356800 MEF2BQ02080 365 aaPredicted RBP14□□□□□ -0.17
SMARCD3-202ENST00000356800 TCTEX1D4Q5JR98 221 aa14□□□□□ -0.17
SMARCD3-202ENST00000356800 SUN5Q8TC36 379 aa14□□□□□ -0.17
SMARCD3-202ENST00000356800 RNF125Q96EQ8 232 aa14□□□□□ -0.17
SMARCD3-202ENST00000356800 HIGD1AQ9Y241 93 aa14□□□□□ -0.17
SMARCD3-202ENST00000356800 PAGE4O60829 102 aa13.99□□□□□ -0.17
SMARCD3-202ENST00000356800 NDUFA7O95182 113 aa13.99□□□□□ -0.17
SMARCD3-202ENST00000356800 IL4P05112 153 aa13.99□□□□□ -0.17
SMARCD3-202ENST00000356800 USF2Q15853 346 aaPredicted RBP13.99□□□□□ -0.17
SMARCD3-202ENST00000356800 ZNF600Q6ZNG1 722 aa13.99□□□□□ -0.17
SMARCD3-202ENST00000356800 OR5AU1Q8NGC0 362 aa13.99□□□□□ -0.17
SMARCD3-202ENST00000356800 OR5B12Q96R08 314 aa13.99□□□□□ -0.17
SMARCD3-202ENST00000356800 GNB4Q9HAV0 340 aa13.99□□□□□ -0.17
SMARCD3-202ENST00000356800 PUS1Q9Y606 427 aaKnown RBP eCLIP13.99□□□□□ -0.17
SMARCD3-202ENST00000356800 ARL2-SNX15V9GYD0 113 aa13.99□□□□□ -0.17
SMARCD3-202ENST00000356800 TRAV5A0A0B4J249 113 aa13.98□□□□□ -0.17
SMARCD3-202ENST00000356800 OR7C2O60412 319 aa13.98□□□□□ -0.17
SMARCD3-202ENST00000356800 APOC3P02656 99 aa13.98□□□□□ -0.17
SMARCD3-202ENST00000356800 ARL3P36405 182 aa13.98□□□□□ -0.17
SMARCD3-202ENST00000356800 CD81P60033 236 aa13.98□□□□□ -0.17
SMARCD3-202ENST00000356800 STXBP6Q8NFX7 210 aa13.98□□□□□ -0.17
SMARCD3-202ENST00000356800 TXNDC17Q9BRA2 123 aa13.98□□□□□ -0.17
SMARCD3-202ENST00000356800 NIPBLQ6KC79 2804 aaeCLIP13.98□□□□□ -0.17
SMARCD3-202ENST00000356800 TOMM20LQ6UXN7 152 aa13.98□□□□□ -0.17
SMARCD3-202ENST00000356800 S100A7AQ86SG5 101 aa13.98□□□□□ -0.17
SMARCD3-202ENST00000356800 ZFAND3Q9H8U3 227 aa13.98□□□□□ -0.17
SMARCD3-202ENST00000356800 IGHV3OR16-8A0A075B7F1 116 aa13.97□□□□□ -0.17
SMARCD3-202ENST00000356800 BMPR1BO00238 502 aa13.97□□□□□ -0.17
SMARCD3-202ENST00000356800 SOHLH1Q5JUK2 328 aa13.97□□□□□ -0.17
SMARCD3-202ENST00000356800 CYB561D1Q8N8Q1 229 aa13.97□□□□□ -0.17
SMARCD3-202ENST00000356800 SLC25A39Q9BZJ4 359 aaPredicted RBP13.97□□□□□ -0.17
SMARCD3-202ENST00000356800 TEP1Q99973 2627 aaKnown RBP13.96□□□□□ -0.17
SMARCD3-202ENST00000356800 TMEM250H0YL14 139 aa13.96□□□□□ -0.17
SMARCD3-202ENST00000356800 SVBPQ8N300 66 aa13.96□□□□□ -0.17
SMARCD3-202ENST00000356800 UBE2E2Q96LR5 201 aa13.96□□□□□ -0.17
SMARCD3-202ENST00000356800 SHANK2-AS3Q9BTD1 123 aa13.96□□□□□ -0.17
SMARCD3-202ENST00000356800 PAXXQ9BUH6 204 aa13.96□□□□□ -0.17
SMARCD3-202ENST00000356800 OR51M1Q9H341 326 aa13.96□□□□□ -0.17
SMARCD3-202ENST00000356800 SETD2Q9BYW2 2564 aaPredicted RBP13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 FAM74A7A6NL05 159 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 C11orf94C9JXX5 98 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 RELQ04864 619 aaPredicted RBP13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 HIST2H2BDQ6DRA6 164 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 CCDC28AQ8IWP9 274 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 PEF1Q9UBV8 284 aaKnown RBP13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 C2CD3Q4AC94 2353 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 MAST4O15021 2626 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 H3BRN7 92 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 PDE6DO43924 150 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 LGALS1P09382 135 aaKnown RBP13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 UBE2G2P60604 165 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 UBE2L3P68036 154 aaKnown RBP13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 CST9LP1Q5W188 147 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 LEMD1Q68G75 181 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 C18orf65Q6ZTR6 163 aa13.95□□□□□ -0.18
SMARCD3-202ENST00000356800 CLPSL1A2RUU4 121 aa13.94□□□□□ -0.18
SMARCD3-202ENST00000356800 OR10J4P0C629 311 aa13.94□□□□□ -0.18
SMARCD3-202ENST00000356800 GUCA2BQ16661 112 aa13.94□□□□□ -0.18
SMARCD3-202ENST00000356800 OR4F5Q8NH21 305 aa13.94□□□□□ -0.18
SMARCD3-202ENST00000356800 FXYD5Q96DB9 178 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms