RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 DNAJC30Q96LL9 226 aa14.34□□□□□ -0.11
COL27A1-201ENST00000356083 PSG8Q9UQ74 426 aa14.34□□□□□ -0.11
COL27A1-201ENST00000356083 TAL2Q16559 108 aa14.33□□□□□ -0.11
COL27A1-201ENST00000356083 FSTP19883 344 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 C5orf47Q569G3 176 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 PSPNO60542 156 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 SAMD5Q5TGI4 173 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 Q6AWC8 147 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 SIGMAR1Q99720 223 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A10PA6NDY2 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A18PA6NE21 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A16PA6NEW6 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A20PA6NIJ5 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A8PA6NJQ4 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A7PA6NKC0 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A22PA8MWA6 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A12PA8MX19 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A5PA8MXJ8 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A23PA8MXZ1 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A15PP0C7V4 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A13PP0C7W8 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A14PP0C7W9 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 FAM90A24PP0C7X0 464 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 MSRB2Q9Y3D2 182 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 TECTAO75443 2155 aa14.33□□□□□ -0.12
COL27A1-201ENST00000356083 C15orf61A6NNL5 157 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 DSCR9P59020 149 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 WDYHV1Q96HA8 205 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 IGLV1-36A0A0B4J1U3 117 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 UBE2BP63146 152 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 GAGE2BQ13066 116 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 ADAMTSL3P82987 1691 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 LINC00587B1AMM8 73 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 LY6HO94772 140 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 PRSS23O95084 383 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 GAGE13Q4V321 117 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 TMEM238C9JI98 176 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 RNF223E7ERA6 249 aa14.32□□□□□ -0.12
COL27A1-201ENST00000356083 CMC4P56277 68 aaPredicted RBP14.31□□□□□ -0.12
COL27A1-201ENST00000356083 H2BFSP57053 126 aa14.31□□□□□ -0.12
COL27A1-201ENST00000356083 TEX38Q6PEX7 206 aa14.31□□□□□ -0.12
COL27A1-201ENST00000356083 TMEM144Q7Z5S9 345 aa14.31□□□□□ -0.12
COL27A1-201ENST00000356083 Q9HAA7 133 aa14.31□□□□□ -0.12
COL27A1-201ENST00000356083 XCL2Q9UBD3 114 aa14.31□□□□□ -0.12
COL27A1-201ENST00000356083 PSG1P11464 419 aa14.31□□□□□ -0.12
COL27A1-201ENST00000356083 TPTE2P1Q5T6R2 138 aa14.31□□□□□ -0.12
COL27A1-201ENST00000356083 IGFL4Q6B9Z1 124 aa14.31□□□□□ -0.12
COL27A1-201ENST00000356083 UBR3Q6ZT12 1888 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 F2Z2F3 143 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 OR9G9P0C7N8 305 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 CSTL1Q9H114 145 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 CD160O95971 181 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 PLAC1Q9HBJ0 212 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 MMP23AO75900 390 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 IFI27L1Q96BM0 104 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 TRAV5A0A0B4J249 113 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 SERF1AO75920 110 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 RASL10AQ92737 203 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 PILRAQ9UKJ1 303 aa14.3□□□□□ -0.12
COL27A1-201ENST00000356083 COX5BP10606 129 aa14.29□□□□□ -0.12
COL27A1-201ENST00000356083 ZNF837Q96EG3 531 aaPredicted RBP14.29□□□□□ -0.12
COL27A1-201ENST00000356083 SYNJ2BPP57105 145 aa14.29□□□□□ -0.12
COL27A1-201ENST00000356083 GLI3P10071 1580 aa14.29□□□□□ -0.12
COL27A1-201ENST00000356083 NRN1Q9NPD7 142 aa14.29□□□□□ -0.12
COL27A1-201ENST00000356083 CUL9Q8IWT3 2517 aa14.29□□□□□ -0.12
COL27A1-201ENST00000356083 TNFRSF14Q92956 283 aa14.29□□□□□ -0.12
COL27A1-201ENST00000356083 WFDC6Q9BQY6 131 aa14.29□□□□□ -0.12
COL27A1-201ENST00000356083 C1QTNF4Q9BXJ3 329 aa14.29□□□□□ -0.12
COL27A1-201ENST00000356083 NHSL1Q5SYE7 1610 aa14.29□□□□□ -0.12
COL27A1-201ENST00000356083 TRAV9-2A0A087WT02 112 aa14.29□□□□□ -0.12
COL27A1-201ENST00000356083 MORN2Q502X0 79 aa14.29□□□□□ -0.12
COL27A1-201ENST00000356083 KNCNA6PVL3 124 aa14.28□□□□□ -0.12
COL27A1-201ENST00000356083 KLF17Q5JT82 389 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-201ENST00000356083 ANAPC1Q9H1A4 1944 aa14.28□□□□□ -0.12
COL27A1-201ENST00000356083 OVOL1O14753 267 aa14.28□□□□□ -0.12
COL27A1-201ENST00000356083 TCTEX1D4Q5JR98 221 aa14.28□□□□□ -0.12
COL27A1-201ENST00000356083 ZNF672Q499Z4 452 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-201ENST00000356083 C14orf178Q8N769 122 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-201ENST00000356083 RPUSD1Q9UJJ7 312 aaKnown RBP14.28□□□□□ -0.12
COL27A1-201ENST00000356083 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.28□□□□□ -0.12
COL27A1-201ENST00000356083 ATP5IP56385 69 aaPredicted RBP14.27□□□□□ -0.12
COL27A1-201ENST00000356083 FAM208BQ5VWN6 2430 aa14.27□□□□□ -0.12
COL27A1-201ENST00000356083 IGHG3P01860 377 aa14.27□□□□□ -0.12
COL27A1-201ENST00000356083 TMEM256Q8N2U0 113 aa14.27□□□□□ -0.12
COL27A1-201ENST00000356083 Q96MF0 132 aa14.27□□□□□ -0.12
COL27A1-201ENST00000356083 GTSF1LQ9H1H1 148 aa14.27□□□□□ -0.12
COL27A1-201ENST00000356083 LIMS1P48059 325 aa14.27□□□□□ -0.13
COL27A1-201ENST00000356083 PVRIGQ6DKI7 326 aa14.27□□□□□ -0.13
COL27A1-201ENST00000356083 Q8TAT8 98 aa14.27□□□□□ -0.13
COL27A1-201ENST00000356083 NXPH4O95158 308 aa14.27□□□□□ -0.13
COL27A1-201ENST00000356083 NMBP08949 121 aa14.27□□□□□ -0.13
COL27A1-201ENST00000356083 HAMPP81172 84 aa14.27□□□□□ -0.13
COL27A1-201ENST00000356083 CFHR1Q03591 330 aa14.27□□□□□ -0.13
COL27A1-201ENST00000356083 ZNF479Q96JC4 524 aa14.27□□□□□ -0.13
COL27A1-201ENST00000356083 MGST2Q99735 147 aa14.27□□□□□ -0.13
COL27A1-201ENST00000356083 PRCDQ00LT1 54 aa14.26□□□□□ -0.13
COL27A1-201ENST00000356083 A0A1B0GW15 77 aa14.26□□□□□ -0.13
COL27A1-201ENST00000356083 D6R8Y8 96 aa14.26□□□□□ -0.13
COL27A1-201ENST00000356083 ZNF525Q8N782 197 aa14.26□□□□□ -0.13
COL27A1-201ENST00000356083 ZNF708P17019 499 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms