RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 PTPRFP10586 1907 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 NRXN3Q9Y4C0 1643 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 IGHV2-26A0A0B4J1V2 119 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 EPOPA6NHQ4 379 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 FBLIM1Q8WUP2 373 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 TCRAP04437 139 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 EXOC3-AS1Q8N2X6 119 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 RNF166Q96A37 237 aaPredicted RBP4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 BCORQ6W2J9 1755 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 DMRTC2Q8IXT2 367 aaPredicted RBP4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 MMP23AO75900 390 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 C20orf204Q6ZNR8 217 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 TBX6O95947 436 aaPredicted RBP4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 LINC00271P0C7V0 271 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 SCRT1Q9BWW7 348 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 MRPS18CQ9Y3D5 142 aaKnown RBP4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 INAFM2P0DMQ5 153 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 B4DSR2 109 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 ZNF138P52744 262 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 TRAV25A0A0B4J276 109 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 A0A1W2PR77 199 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 ZNF672Q499Z4 452 aaPredicted RBP4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 COL11A1P12107 1806 aaPredicted RBP4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 CD5LO43866 347 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 PLPPR1Q8TBJ4 325 aa4.78□□□□□ -1.64
SRGAP1-201ENST00000355086 MLNRO43193 412 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 DEFB130BP0DP73 79 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 DEFB130AP0DP74 79 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 LCN12Q6JVE5 192 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 ZNF837Q96EG3 531 aaPredicted RBP4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 DUTP33316 252 aaKnown RBP4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 NDPQ00604 133 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 MINOS1Q5TGZ0 78 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 TMEM190Q8WZ59 177 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 MINOS1-NBL1R4GNA1 71 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 WISP3O95389 354 aaPredicted RBP4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 TNFSF13O75888 250 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 NDUFS5O43920 106 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 NDUFAF3Q9BU61 184 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 ATAD5Q96QE3 1844 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 IGKV1D-13A0A0B4J2D9 117 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 IGKV1-13P0DP09 117 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 USMG5Q96IX5 58 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 SCN7AQ01118 1682 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 IGHV1-18A0A0C4DH31 117 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 DOCK4Q8N1I0 1966 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 FAM90A9PA6NNJ1 464 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 BCL6BQ8N143 479 aaPredicted RBP4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 F5H768 121 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 E9PLN8 166 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 LINC00477Q96M19 166 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 KIAA1551Q9HCM1 1747 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 IGHV1-46P01743 117 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 IGLV3-21P80748 117 aaPredicted RBP4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 DSCR8Q96T75 97 aa4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.77□□□□□ -1.65
SRGAP1-201ENST00000355086 H3BUX3 64 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 TRGV9Q99603 122 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 KLF17Q5JT82 389 aaPredicted RBP4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 SPACA3Q8IXA5 215 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 WBP1Q96G27 269 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 NAA38Q9BRA0 125 aaKnown RBP4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 GREB1Q4ZG55 1949 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 SOCS3O14543 225 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 TPTE2P1Q5T6R2 138 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 ZNF319Q9P2F9 582 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 NHSQ6T4R5 1651 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 DAD1P61803 113 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 IFITM2Q01629 132 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 LYZL1Q6UWQ5 148 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 GTSF1LQ9H1H1 148 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 SH2D1AO60880 128 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 IGHV1-3A0A0C4DH29 117 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 CFHR3Q02985 330 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 RPRMLQ8N4K4 120 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 ALS2Q96Q42 1657 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 hADV29S1A0JD25 119 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 F8VVB4 439 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 F8VWA3 439 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 TMEM200BQ69YZ2 307 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 ZNF329Q86UD4 541 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 A0A087WWL8 130 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 TFF1P04155 84 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 LY6G5BQ8NDX9 201 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 TIMP3P35625 211 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 BRD3OSQ6XYD6 125 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 C9JAW5 83 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 SLC25A48Q6ZT89 311 aaKnown RBP4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 A0A087X0K7 114 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 GUSBP1Q15486 140 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 C10orf55Q5SWW7 151 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 SONP18583 2426 aaKnown RBP4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 SPRR3Q9UBC9 169 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 LINC01356Q8N9X3 169 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 SPXQ9BT56 116 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 CHAC1Q9BUX1 264 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 EML6Q6ZMW3 1958 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 TCTEX1D4Q5JR98 221 aa4.76□□□□□ -1.65
SRGAP1-201ENST00000355086 IGHG3P01860 377 aa4.75□□□□□ -1.65
SRGAP1-201ENST00000355086 ANXA2RQ3ZCQ2 193 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms