RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 ADAMTS7Q9UKP4 1686 aa6.71□□□□□ -1.33
SCN8A-201ENST00000354534 MRPS18AQ9NVS2 196 aaKnown RBP6.71□□□□□ -1.33
SCN8A-201ENST00000354534 CASP8AP2Q9UKL3 1982 aa6.71□□□□□ -1.33
SCN8A-201ENST00000354534 SYS1-DBNDD2H3BUS1 97 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 VN1R4Q7Z5H5 301 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 ZPLD1Q8TCW7 415 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 SPAARA0A1B0GVQ0 90 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 CD55P08174 381 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 SLAQ13239 276 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 PCOLCEQ15113 449 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 ZNF362Q5T0B9 420 aaPredicted RBP6.71□□□□□ -1.34
SCN8A-201ENST00000354534 DUX4L9Q6RFH8 374 aaPredicted RBP6.71□□□□□ -1.34
SCN8A-201ENST00000354534 ZIC1Q15915 447 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 SRSF3P84103 164 aaKnown RBP6.71□□□□□ -1.34
SCN8A-201ENST00000354534 NRN1LQ496H8 165 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.71□□□□□ -1.34
SCN8A-201ENST00000354534 C1QTNF4Q9BXJ3 329 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 TSKUQ8WUA8 353 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 V9GYY9 64 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 TNCP24821 2201 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 PYYP10082 97 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 CRYBA2P53672 197 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 MPLKIPQ8TAP9 179 aa6.71□□□□□ -1.34
SCN8A-201ENST00000354534 KLF14Q8TD94 323 aaPredicted RBP6.71□□□□□ -1.34
SCN8A-201ENST00000354534 ZNF703Q9H7S9 590 aaPredicted RBP6.71□□□□□ -1.34
SCN8A-201ENST00000354534 IGHV4-28A0A0C4DH34 117 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 ZNF319Q9P2F9 582 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 ARHGAP32A7KAX9 2087 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 C15orf53Q8NAA6 179 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 FAM60AQ9NP50 221 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 ARID2Q68CP9 1835 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 TRAV40A0A0B4J280 105 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 TCRBV4S1A1TA0A5B7 111 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 FAM104BQ5XKR9 115 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 MUSTN1Q8IVN3 82 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 EML6Q6ZMW3 1958 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 A0A0A6YYD4 124 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 TRBV5-5A0A0J9YX44 114 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 A0A1W2PPV9 198 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 J3KT08 172 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 COLCA1Q6ZS62 124 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 CD160O95971 181 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 CXCL10P02778 98 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 VSIRQ9H7M9 311 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 THADAQ6YHU6 1953 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 C9orf118A6NHY6 69 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 ACYP1P07311 99 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 STPG4Q8N801 248 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 BMPERQ8N8U9 685 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 K7EP13 123 aa6.7□□□□□ -1.34
SCN8A-201ENST00000354534 RPP25Q9BUL9 199 aaKnown RBP6.7□□□□□ -1.34
SCN8A-201ENST00000354534 COX14Q96I36 57 aa6.69□□□□□ -1.34
SCN8A-201ENST00000354534 SMKR1H3BMG3 65 aa6.69□□□□□ -1.34
SCN8A-201ENST00000354534 KLF5Q13887 457 aaPredicted RBP6.69□□□□□ -1.34
SCN8A-201ENST00000354534 RNF115Q9Y4L5 304 aa6.69□□□□□ -1.34
SCN8A-201ENST00000354534 A0A1W2PR77 199 aa6.69□□□□□ -1.34
SCN8A-201ENST00000354534 TEX22C9J3V5 150 aa6.69□□□□□ -1.34
SCN8A-201ENST00000354534 CXCL1P09341 107 aa6.69□□□□□ -1.34
SCN8A-201ENST00000354534 C8orf82Q6P1X6 216 aaPredicted RBP6.69□□□□□ -1.34
SCN8A-201ENST00000354534 F6UB75 175 aa6.69□□□□□ -1.34
SCN8A-201ENST00000354534 RNF125Q96EQ8 232 aa6.69□□□□□ -1.34
SCN8A-201ENST00000354534 CARD19Q96LW7 228 aa6.69□□□□□ -1.34
SCN8A-201ENST00000354534 AMN1Q8IY45 258 aa6.69□□□□□ -1.34
SCN8A-201ENST00000354534 SRSF7Q16629 238 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCN8A-201ENST00000354534 PRSS57Q6UWY2 283 aa6.69□□□□□ -1.34
SCN8A-201ENST00000354534 C17orf98A8MV24 154 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 ETDBQ3ZM63 59 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 RNF183Q96D59 192 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 Q96M66 194 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 PROP1O75360 226 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 DPM3Q9P2X0 92 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 PKIGQ9Y2B9 76 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 PSME4Q14997 1843 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 RALGAPA2Q2PPJ7 1873 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 H3BMG7 143 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 ID3Q02535 119 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 ZC2HC1BQ5TFG8 222 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 PTPRQQ9UMZ3 2332 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 IGHV5-10-1A0A0J9YXX1 117 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 C22orf46C9J442 243 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 K7ERS5 55 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 C1orf100Q5SVJ3 147 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 LYZL1Q6UWQ5 148 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 FAM90A1Q86YD7 464 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 TRBV5-3A0A0A0MS03 114 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 OSR1Q8TAX0 266 aaPredicted RBP6.68□□□□□ -1.34
SCN8A-201ENST00000354534 J3QW42 95 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 MP68P56378 58 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 LY75O60449 1722 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 LOC102723996A0A087X1L8 192 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 ZNF138P52744 262 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 UCNP55089 124 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 A0A1B0GX51 115 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 NPSP0C0P6 89 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 NEGR1Q7Z3B1 354 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 TMEM256Q8N2U0 113 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 C3orf79P0CE67 100 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 EXOC3-AS1Q8N2X6 119 aa6.68□□□□□ -1.34
SCN8A-201ENST00000354534 TIMM23O14925 209 aa6.67□□□□□ -1.34
SCN8A-201ENST00000354534 EFEMP2O95967 443 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms